RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 CASC2Q6XLA1 102 aa4.8□□□□□ -1.64
PFDN5-212ENST00000550880 K7EP34 96 aa4.79□□□□□ -1.64
PFDN5-212ENST00000550880 KRTAP3-1Q9BYR8 98 aa4.79□□□□□ -1.64
PFDN5-212ENST00000550880 SMCPP49901 116 aaPredicted RBP4.78□□□□□ -1.64
PFDN5-212ENST00000550880 SPCS1Q9Y6A9 102 aa4.77□□□□□ -1.65
PFDN5-212ENST00000550880 A0A1W2PPM0 123 aa4.76□□□□□ -1.65
PFDN5-212ENST00000550880 PRO2289Q9P1D8 64 aa4.76□□□□□ -1.65
PFDN5-212ENST00000550880 KRTAP8-1Q8IUC2 63 aa4.74□□□□□ -1.65
PFDN5-212ENST00000550880 F8W1H4 67 aa4.73□□□□□ -1.65
PFDN5-212ENST00000550880 SCGB1A1P11684 91 aa4.72□□□□□ -1.65
PFDN5-212ENST00000550880 LCE1AQ5T7P2 110 aa4.72□□□□□ -1.65
PFDN5-212ENST00000550880 Q8N9L7 120 aa4.72□□□□□ -1.65
PFDN5-212ENST00000550880 SPRR2DP22532 72 aa4.71□□□□□ -1.66
PFDN5-212ENST00000550880 NAA38Q9BRA0 125 aaKnown RBP4.7□□□□□ -1.66
PFDN5-212ENST00000550880 KRTAP3-3Q9BYR6 98 aa4.68□□□□□ -1.66
PFDN5-212ENST00000550880 PLAC4Q8WY50 150 aa4.65□□□□□ -1.67
PFDN5-212ENST00000550880 A8MUN3 132 aa4.63□□□□□ -1.67
PFDN5-212ENST00000550880 TP53AIP1Q9HCN2 124 aa4.63□□□□□ -1.67
PFDN5-212ENST00000550880 H3BT86 120 aa4.62□□□□□ -1.67
PFDN5-212ENST00000550880 MT1XP80297 61 aa4.62□□□□□ -1.67
PFDN5-212ENST00000550880 KRTAP12-2P59991 146 aa4.61□□□□□ -1.67
PFDN5-212ENST00000550880 ETDBQ3ZM63 59 aa4.61□□□□□ -1.67
PFDN5-212ENST00000550880 LCE3BQ5TA77 95 aa4.61□□□□□ -1.67
PFDN5-212ENST00000550880 H0YAA0 97 aa4.6□□□□□ -1.67
PFDN5-212ENST00000550880 NDUFC1O43677 76 aa4.59□□□□□ -1.67
PFDN5-212ENST00000550880 PRO0461Q9UI25 63 aa4.59□□□□□ -1.67
PFDN5-212ENST00000550880 A0A087WVE0 104 aa4.57□□□□□ -1.68
PFDN5-212ENST00000550880 UBL5Q9BZL1 73 aa4.57□□□□□ -1.68
PFDN5-212ENST00000550880 ADM2Q7Z4H4 148 aa4.56□□□□□ -1.68
PFDN5-212ENST00000550880 CYP4F30PQ9H0H9 118 aa4.56□□□□□ -1.68
PFDN5-212ENST00000550880 GPR98Q8WXG9 6306 aa4.55□□□□□ -1.68
PFDN5-212ENST00000550880 KRTAP4-8A0A0G2JLE6 195 aa4.53□□□□□ -1.68
PFDN5-212ENST00000550880 KRTAP4-8Q9BYQ9 185 aa4.53□□□□□ -1.68
PFDN5-212ENST00000550880 ACYP1P07311 99 aa4.51□□□□□ -1.69
PFDN5-212ENST00000550880 LOC101927531A0A1B0GV80 90 aa4.5□□□□□ -1.69
PFDN5-212ENST00000550880 FAM240AA0A1B0GVK7 77 aa4.5□□□□□ -1.69
PFDN5-212ENST00000550880 ANAPC13Q9BS18 74 aa4.5□□□□□ -1.69
PFDN5-212ENST00000550880 R4GN34 69 aa4.5□□□□□ -1.69
PFDN5-212ENST00000550880 MT-ATP8P03928 68 aa4.48□□□□□ -1.69
PFDN5-212ENST00000550880 TRAV22A0A0B4J277 110 aa4.47□□□□□ -1.69
PFDN5-212ENST00000550880 C20orf197Q8N268 126 aa4.45□□□□□ -1.7
PFDN5-212ENST00000550880 M0QZ58 72 aa4.43□□□□□ -1.7
PFDN5-212ENST00000550880 DSTQ03001 7570 aaKnown RBP4.43□□□□□ -1.7
PFDN5-212ENST00000550880 LINC00643Q86TS7 51 aa4.42□□□□□ -1.7
PFDN5-212ENST00000550880 KRTAP10-7P60409 375 aaPredicted RBP4.41□□□□□ -1.7
PFDN5-212ENST00000550880 KRTAP10-12P60413 245 aa4.4□□□□□ -1.71
PFDN5-212ENST00000550880 LINC01554Q52M75 96 aa4.4□□□□□ -1.71
PFDN5-212ENST00000550880 ATOX1O00244 68 aa4.38□□□□□ -1.71
PFDN5-212ENST00000550880 P0C880 135 aa4.36□□□□□ -1.71
PFDN5-212ENST00000550880 H0Y9P7 68 aa4.35□□□□□ -1.71
PFDN5-212ENST00000550880 KRTAP4-9Q9BYQ8 210 aa4.35□□□□□ -1.71
PFDN5-212ENST00000550880 UQCRQO14949 82 aa4.34□□□□□ -1.71
PFDN5-212ENST00000550880 ATP5EP2Q5VTU8 51 aa4.34□□□□□ -1.71
PFDN5-212ENST00000550880 SVIPQ8NHG7 77 aa4.33□□□□□ -1.72
PFDN5-212ENST00000550880 CCDC179H3BU77 68 aa4.32□□□□□ -1.72
PFDN5-212ENST00000550880 COX7CP15954 63 aa4.3□□□□□ -1.72
PFDN5-212ENST00000550880 SMIM20Q8N5G0 67 aa4.27□□□□□ -1.73
PFDN5-212ENST00000550880 HIST1H4AP62805 103 aaKnown RBP4.26□□□□□ -1.73
PFDN5-212ENST00000550880 SERP2Q8N6R1 65 aa4.26□□□□□ -1.73
PFDN5-212ENST00000550880 TMEM258P61165 79 aa4.25□□□□□ -1.73
PFDN5-212ENST00000550880 LINC00208Q96KT6 92 aa4.25□□□□□ -1.73
PFDN5-212ENST00000550880 KRTAP3-2Q9BYR7 98 aa4.24□□□□□ -1.73
PFDN5-212ENST00000550880 LCE5AQ5TCM9 118 aa4.23□□□□□ -1.73
PFDN5-212ENST00000550880 RPS28P62857 69 aaKnown RBP4.22□□□□□ -1.73
PFDN5-212ENST00000550880 MP68P56378 58 aa4.21□□□□□ -1.74
PFDN5-212ENST00000550880 LCE1DQ5T752 114 aa4.21□□□□□ -1.74
PFDN5-212ENST00000550880 KRTAP19-3Q7Z4W3 81 aa4.19□□□□□ -1.74
PFDN5-212ENST00000550880 TRAV7A0A075B6U4 112 aa4.18□□□□□ -1.74
PFDN5-212ENST00000550880 ATP5EP56381 51 aaPredicted RBP4.16□□□□□ -1.74
PFDN5-212ENST00000550880 HMCN1Q96RW7 5635 aa4.15□□□□□ -1.75
PFDN5-212ENST00000550880 MT4P47944 62 aa4.14□□□□□ -1.75
PFDN5-212ENST00000550880 LCE4AQ5TA78 99 aa4.14□□□□□ -1.75
PFDN5-212ENST00000550880 DMAC1Q96GE9 116 aa4.14□□□□□ -1.75
PFDN5-212ENST00000550880 CYSTM1Q9H1C7 97 aa4.14□□□□□ -1.75
PFDN5-212ENST00000550880 MT1EP04732 61 aa4.13□□□□□ -1.75
PFDN5-212ENST00000550880 KRTAP19-7Q3SYF9 63 aa4.13□□□□□ -1.75
PFDN5-212ENST00000550880 SERP1Q9Y6X1 66 aa4.12□□□□□ -1.75
PFDN5-212ENST00000550880 AHNAK2Q8IVF2 5795 aa4.1□□□□□ -1.75
PFDN5-212ENST00000550880 CAMK2N1Q7Z7J9 78 aa4.1□□□□□ -1.75
PFDN5-212ENST00000550880 SPTSSBQ8NFR3 76 aa4.09□□□□□ -1.75
PFDN5-212ENST00000550880 H3BPC8 53 aa4.08□□□□□ -1.76
PFDN5-212ENST00000550880 PP632Q6XCG6 107 aa4.08□□□□□ -1.76
PFDN5-212ENST00000550880 MT1GP13640 62 aa4.07□□□□□ -1.76
PFDN5-212ENST00000550880 KRTAP5-10Q6L8G5 202 aa4.07□□□□□ -1.76
PFDN5-212ENST00000550880 OCR1Q9BZK8 76 aa4.07□□□□□ -1.76
PFDN5-212ENST00000550880 SMIM26A0A096LP01 95 aa4.06□□□□□ -1.76
PFDN5-212ENST00000550880 H7BZZ5 65 aa4.05□□□□□ -1.76
PFDN5-212ENST00000550880 ACYP2P14621 99 aa4.03□□□□□ -1.76
PFDN5-212ENST00000550880 SNURFQ9Y675 71 aa4.03□□□□□ -1.76
PFDN5-212ENST00000550880 CHKB-CPT1BH3BT56 60 aa3.98□□□□□ -1.77
PFDN5-212ENST00000550880 KRTAP5-7Q6L8G8 165 aa3.97□□□□□ -1.77
PFDN5-212ENST00000550880 A0A0D9SG42 100 aa3.96□□□□□ -1.78
PFDN5-212ENST00000550880 KRTAP19-5Q3LI72 72 aa3.96□□□□□ -1.78
PFDN5-212ENST00000550880 KRTAP5-4Q6L8H1 288 aa3.96□□□□□ -1.78
PFDN5-212ENST00000550880 MT1MQ8N339 61 aa3.96□□□□□ -1.78
PFDN5-212ENST00000550880 PRO0628Q9UI54 55 aa3.96□□□□□ -1.78
PFDN5-212ENST00000550880 KRTAP4-6Q9BYQ5 205 aa3.95□□□□□ -1.78
PFDN5-212ENST00000550880 V9GYY9 64 aa3.95□□□□□ -1.78
PFDN5-212ENST00000550880 KRTAP13-4Q3LI77 160 aa3.91□□□□□ -1.78
PFDN5-212ENST00000550880 KRTAP5-3Q6L8H2 238 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms