RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-206ENST00000550851 RYR1P21817 5038 aa5.58□□□□□ -1.52
LGR5-206ENST00000550851 KIAA1109Q2LD37 5005 aa5.58□□□□□ -1.52
LGR5-206ENST00000550851 LRP1BQ9NZR2 4599 aa5.58□□□□□ -1.52
LGR5-206ENST00000550851 ANK2Q01484 3957 aa5.58□□□□□ -1.52
LGR5-206ENST00000550851 KRTAP13-4Q3LI77 160 aa5.57□□□□□ -1.52
LGR5-206ENST00000550851 KRTAP10-6P60371 365 aaPredicted RBP5.57□□□□□ -1.52
LGR5-206ENST00000550851 LYSTQ99698 3801 aa5.57□□□□□ -1.52
LGR5-206ENST00000550851 KMT2AQ03164 3969 aa5.56□□□□□ -1.52
LGR5-206ENST00000550851 KRTAP12-1P59990 96 aa5.53□□□□□ -1.52
LGR5-206ENST00000550851 A0A0A0MQY5 61 aa5.53□□□□□ -1.52
LGR5-206ENST00000550851 DNAH8Q96JB1 4490 aa5.53□□□□□ -1.52
LGR5-206ENST00000550851 DNAH17Q9UFH2 4485 aa5.52□□□□□ -1.53
LGR5-206ENST00000550851 MYCBP2O75592 4640 aa5.49□□□□□ -1.53
LGR5-206ENST00000550851 KRTAP3-3Q9BYR6 98 aa5.49□□□□□ -1.53
LGR5-206ENST00000550851 PP632Q6XCG6 107 aa5.48□□□□□ -1.53
LGR5-206ENST00000550851 ALMS1Q8TCU4 4167 aa5.48□□□□□ -1.53
LGR5-206ENST00000550851 DNAH2Q9P225 4427 aa5.47□□□□□ -1.53
LGR5-206ENST00000550851 KRTAP3-2Q9BYR7 98 aa5.42□□□□□ -1.54
LGR5-206ENST00000550851 RYR3Q15413 4870 aa5.42□□□□□ -1.54
LGR5-206ENST00000550851 SACSQ9NZJ4 4579 aa5.41□□□□□ -1.54
LGR5-206ENST00000550851 PRO2289Q9P1D8 64 aa5.4□□□□□ -1.55
LGR5-206ENST00000550851 FAT3Q8TDW7 4589 aa5.38□□□□□ -1.55
LGR5-206ENST00000550851 VPS13BQ7Z7G8 4022 aa5.36□□□□□ -1.55
LGR5-206ENST00000550851 LRP1Q07954 4544 aaKnown RBP5.34□□□□□ -1.56
LGR5-206ENST00000550851 DYNC2H1Q8NCM8 4307 aaKnown RBP5.32□□□□□ -1.56
LGR5-206ENST00000550851 HYDINQ4G0P3 5121 aa5.31□□□□□ -1.56
LGR5-206ENST00000550851 FAT2Q9NYQ8 4349 aa5.3□□□□□ -1.56
LGR5-206ENST00000550851 APOBP04114 4563 aaKnown RBP5.3□□□□□ -1.56
LGR5-206ENST00000550851 DNAH3Q8TD57 4116 aa5.29□□□□□ -1.56
LGR5-206ENST00000550851 DNAH6Q9C0G6 4158 aa5.29□□□□□ -1.56
LGR5-206ENST00000550851 CMYA5Q8N3K9 4069 aa5.28□□□□□ -1.56
LGR5-206ENST00000550851 DNAH7Q8WXX0 4024 aa5.28□□□□□ -1.56
LGR5-206ENST00000550851 LORP23490 312 aaPredicted RBP5.26□□□□□ -1.57
LGR5-206ENST00000550851 KRTAP17-1Q9BYP8 105 aa5.25□□□□□ -1.57
LGR5-206ENST00000550851 KRTAP4-1Q9BYQ7 146 aa5.25□□□□□ -1.57
LGR5-206ENST00000550851 FRAS1Q86XX4 4008 aa5.23□□□□□ -1.57
LGR5-206ENST00000550851 PKHD1P08F94 4074 aa5.19□□□□□ -1.58
LGR5-206ENST00000550851 KMT2CQ8NEZ4 4911 aaKnown RBP5.16□□□□□ -1.58
LGR5-206ENST00000550851 RYR2Q92736 4967 aa5.16□□□□□ -1.58
LGR5-206ENST00000550851 HERC2O95714 4834 aa5.15□□□□□ -1.59
LGR5-206ENST00000550851 LRP2P98164 4655 aa5.12□□□□□ -1.59
LGR5-206ENST00000550851 HECTD4Q9Y4D8 3996 aa5.11□□□□□ -1.59
LGR5-206ENST00000550851 KRTAP15-1Q3LI76 137 aa5□□□□□ -1.61
LGR5-206ENST00000550851 KRTAP10-12P60413 245 aa4.97□□□□□ -1.61
LGR5-206ENST00000550851 MT1HP80294 61 aa4.96□□□□□ -1.62
LGR5-206ENST00000550851 HSPG2P98160 4391 aa4.94□□□□□ -1.62
LGR5-206ENST00000550851 PCLOQ9Y6V0 5065 aa4.9□□□□□ -1.63
LGR5-206ENST00000550851 MT2AP02795 61 aa4.88□□□□□ -1.63
LGR5-206ENST00000550851 EPPK1P58107 5090 aaKnown RBP4.88□□□□□ -1.63
LGR5-206ENST00000550851 LCE3AQ5TA76 89 aa4.88□□□□□ -1.63
LGR5-206ENST00000550851 PKD1P98161 4303 aa4.87□□□□□ -1.63
LGR5-206ENST00000550851 BIRC6Q9NR09 4857 aa4.87□□□□□ -1.63
LGR5-206ENST00000550851 KRTAP12-3P60328 96 aa4.84□□□□□ -1.63
LGR5-206ENST00000550851 LPAP08519 4548 aa4.84□□□□□ -1.63
LGR5-206ENST00000550851 MT1FP04733 61 aa4.84□□□□□ -1.63
LGR5-206ENST00000550851 ABCA13Q86UQ4 5058 aa4.79□□□□□ -1.64
LGR5-206ENST00000550851 CRCT1Q9UGL9 99 aa4.78□□□□□ -1.64
LGR5-206ENST00000550851 SPRR2GQ9BYE4 73 aa4.77□□□□□ -1.65
LGR5-206ENST00000550851 HERC1Q15751 4861 aa4.72□□□□□ -1.65
LGR5-206ENST00000550851 KRTAP23-1A1A580 65 aa4.66□□□□□ -1.66
LGR5-206ENST00000550851 KRTAP19-1Q8IUB9 90 aa4.66□□□□□ -1.66
LGR5-206ENST00000550851 FSIP2Q5CZC0 6907 aa4.65□□□□□ -1.67
LGR5-206ENST00000550851 KRTAP8-1Q8IUC2 63 aa4.62□□□□□ -1.67
LGR5-206ENST00000550851 RNF213Q63HN8 5207 aa4.62□□□□□ -1.67
LGR5-206ENST00000550851 LCE2CQ5TA81 110 aa4.59□□□□□ -1.67
LGR5-206ENST00000550851 PKHD1L1Q86WI1 4243 aa4.58□□□□□ -1.68
LGR5-206ENST00000550851 UBR4Q5T4S7 5183 aa4.57□□□□□ -1.68
LGR5-206ENST00000550851 MUC2Q02817 5179 aa4.56□□□□□ -1.68
LGR5-206ENST00000550851 TNXBP22105 4242 aa4.56□□□□□ -1.68
LGR5-206ENST00000550851 KRTAP9-8Q9BYQ0 159 aa4.54□□□□□ -1.68
LGR5-206ENST00000550851 FAT4Q6V0I7 4981 aa4.48□□□□□ -1.69
LGR5-206ENST00000550851 KRTAP19-2Q3LHN2 52 aa4.48□□□□□ -1.69
LGR5-206ENST00000550851 KRTAP19-8Q3LI54 63 aa4.47□□□□□ -1.69
LGR5-206ENST00000550851 KRTAP10-7P60409 375 aaPredicted RBP4.47□□□□□ -1.69
LGR5-206ENST00000550851 MUC17Q685J3 4493 aa4.47□□□□□ -1.69
LGR5-206ENST00000550851 KRTAP19-5Q3LI72 72 aa4.46□□□□□ -1.7
LGR5-206ENST00000550851 MT1BP07438 61 aa4.45□□□□□ -1.7
LGR5-206ENST00000550851 MT1XP80297 61 aa4.42□□□□□ -1.7
LGR5-206ENST00000550851 SPRR2FQ96RM1 72 aa4.39□□□□□ -1.71
LGR5-206ENST00000550851 KRTAP9-3Q9BYQ3 159 aa4.38□□□□□ -1.71
LGR5-206ENST00000550851 KRTAP10-5P60370 271 aa4.38□□□□□ -1.71
LGR5-206ENST00000550851 FLGP20930 4061 aaPredicted RBP4.34□□□□□ -1.71
LGR5-206ENST00000550851 KRTAP4-8A0A0G2JLE6 195 aa4.34□□□□□ -1.71
LGR5-206ENST00000550851 KRTAP4-8Q9BYQ9 185 aa4.34□□□□□ -1.71
LGR5-206ENST00000550851 HMCN2Q8NDA2 5059 aa4.32□□□□□ -1.72
LGR5-206ENST00000550851 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
LGR5-206ENST00000550851 INE1O15225 51 aa4.3□□□□□ -1.72
LGR5-206ENST00000550851 LCE2BO14633 110 aa4.28□□□□□ -1.72
LGR5-206ENST00000550851 LCE3CQ5T5A8 94 aa4.27□□□□□ -1.73
LGR5-206ENST00000550851 OBSCNQ5VST9 7968 aa4.18□□□□□ -1.74
LGR5-206ENST00000550851 LCE2AQ5TA79 106 aaPredicted RBP4.07□□□□□ -1.76
LGR5-206ENST00000550851 KRTAP4-7Q9BYR0 210 aa4.06□□□□□ -1.76
LGR5-206ENST00000550851 MT1GP13640 62 aa4.05□□□□□ -1.76
LGR5-206ENST00000550851 SPRR2EP22531 72 aa4.04□□□□□ -1.76
LGR5-206ENST00000550851 SPRR2BP35325 72 aa4.04□□□□□ -1.76
LGR5-206ENST00000550851 SPRR2AP35326 72 aa4.04□□□□□ -1.76
LGR5-206ENST00000550851 USH2AO75445 5202 aa4.02□□□□□ -1.77
LGR5-206ENST00000550851 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
LGR5-206ENST00000550851 KRTAP19-4Q3LI73 84 aa3.96□□□□□ -1.78
LGR5-206ENST00000550851 DSTQ03001 7570 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms