RNA–Protein interactions for RNA: ENST00000550527.5

APAF1-209, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APAF1, Length 6,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-209ENST00000550527 DNAH7Q8WXX0 4024 aa2.32□□□□□ -2.04
APAF1-209ENST00000550527 A0A1B0GVY2 172 aa2.32□□□□□ -2.04
APAF1-209ENST00000550527 KMT2AQ03164 3969 aa2.32□□□□□ -2.04
APAF1-209ENST00000550527 TGP01266 2768 aa2.32□□□□□ -2.04
APAF1-209ENST00000550527 RYR2Q92736 4967 aa2.31□□□□□ -2.04
APAF1-209ENST00000550527 LORP23490 312 aaPredicted RBP2.31□□□□□ -2.04
APAF1-209ENST00000550527 COL7A1Q02388 2944 aa2.29□□□□□ -2.04
APAF1-209ENST00000550527 KRTAP10-7P60409 375 aaPredicted RBP2.29□□□□□ -2.04
APAF1-209ENST00000550527 BIRC6Q9NR09 4857 aa2.28□□□□□ -2.04
APAF1-209ENST00000550527 PCLOQ9Y6V0 5065 aa2.27□□□□□ -2.05
APAF1-209ENST00000550527 DNAH9Q9NYC9 4486 aa2.26□□□□□ -2.05
APAF1-209ENST00000550527 SRRM2Q9UQ35 2752 aaKnown RBP2.25□□□□□ -2.05
APAF1-209ENST00000550527 PRKDCP78527 4128 aaKnown RBP2.24□□□□□ -2.05
APAF1-209ENST00000550527 DNAH1Q9P2D7 4330 aa2.22□□□□□ -2.05
APAF1-209ENST00000550527 HERC2O95714 4834 aa2.22□□□□□ -2.05
APAF1-209ENST00000550527 KRTAP17-1Q9BYP8 105 aa2.21□□□□□ -2.05
APAF1-209ENST00000550527 HYDINQ4G0P3 5121 aa2.21□□□□□ -2.06
APAF1-209ENST00000550527 PLECQ15149 4684 aaKnown RBP2.21□□□□□ -2.06
APAF1-209ENST00000550527 DNAH6Q9C0G6 4158 aa2.2□□□□□ -2.06
APAF1-209ENST00000550527 DNAH3Q8TD57 4116 aa2.2□□□□□ -2.06
APAF1-209ENST00000550527 STARD9Q9P2P6 4700 aa2.19□□□□□ -2.06
APAF1-209ENST00000550527 VPS13DQ5THJ4 4388 aa2.18□□□□□ -2.06
APAF1-209ENST00000550527 MEGF8Q7Z7M0 2845 aa2.17□□□□□ -2.06
APAF1-209ENST00000550527 LRP1BQ9NZR2 4599 aa2.15□□□□□ -2.06
APAF1-209ENST00000550527 VPS13BQ7Z7G8 4022 aa2.15□□□□□ -2.06
APAF1-209ENST00000550527 DNHD1Q96M86 4753 aa2.15□□□□□ -2.07
APAF1-209ENST00000550527 KRTAP10-10P60014 251 aa2.14□□□□□ -2.07
APAF1-209ENST00000550527 HECTD4Q9Y4D8 3996 aa2.14□□□□□ -2.07
APAF1-209ENST00000550527 DNAH11Q96DT5 4516 aa2.14□□□□□ -2.07
APAF1-209ENST00000550527 DNAH17Q9UFH2 4485 aa2.13□□□□□ -2.07
APAF1-209ENST00000550527 DNAH8Q96JB1 4490 aa2.12□□□□□ -2.07
APAF1-209ENST00000550527 LCE3AQ5TA76 89 aa2.12□□□□□ -2.07
APAF1-209ENST00000550527 DNAH2Q9P225 4427 aa2.11□□□□□ -2.07
APAF1-209ENST00000550527 KRTAP12-3P60328 96 aa2.1□□□□□ -2.07
APAF1-209ENST00000550527 KRTAP4-5Q9BYR2 181 aa2.09□□□□□ -2.07
APAF1-209ENST00000550527 PKHD1P08F94 4074 aa2.09□□□□□ -2.07
APAF1-209ENST00000550527 DYNC2H1Q8NCM8 4307 aaKnown RBP2.09□□□□□ -2.08
APAF1-209ENST00000550527 KRTAP10-12P60413 245 aa2.08□□□□□ -2.08
APAF1-209ENST00000550527 FAT2Q9NYQ8 4349 aa2.07□□□□□ -2.08
APAF1-209ENST00000550527 SPRR5A0A1B0GTR4 108 aa2.07□□□□□ -2.08
APAF1-209ENST00000550527 KRTAP19-4Q3LI73 84 aa2.06□□□□□ -2.08
APAF1-209ENST00000550527 ABCA13Q86UQ4 5058 aa2.06□□□□□ -2.08
APAF1-209ENST00000550527 KIAA1109Q2LD37 5005 aa2.04□□□□□ -2.08
APAF1-209ENST00000550527 DNAH5Q8TE73 4624 aa2.03□□□□□ -2.08
APAF1-209ENST00000550527 KMT2CQ8NEZ4 4911 aaKnown RBP2.03□□□□□ -2.08
APAF1-209ENST00000550527 FAT1Q14517 4588 aa2.03□□□□□ -2.08
APAF1-209ENST00000550527 CRCT1Q9UGL9 99 aa2□□□□□ -2.09
APAF1-209ENST00000550527 LPAP08519 4548 aa1.99□□□□□ -2.09
APAF1-209ENST00000550527 SACSQ9NZJ4 4579 aa1.98□□□□□ -2.09
APAF1-209ENST00000550527 KRTAP10-4P60372 401 aaPredicted RBP1.98□□□□□ -2.09
APAF1-209ENST00000550527 FAT3Q8TDW7 4589 aa1.97□□□□□ -2.09
APAF1-209ENST00000550527 RYR3Q15413 4870 aa1.97□□□□□ -2.09
APAF1-209ENST00000550527 PKD1P98161 4303 aa1.97□□□□□ -2.09
APAF1-209ENST00000550527 EPPK1P58107 5090 aaKnown RBP1.96□□□□□ -2.1
APAF1-209ENST00000550527 LRP1Q07954 4544 aaKnown RBP1.95□□□□□ -2.1
APAF1-209ENST00000550527 KRTAP9-9Q9BYP9 154 aa1.95□□□□□ -2.1
APAF1-209ENST00000550527 KRTAP9-4Q9BYQ2 154 aa1.95□□□□□ -2.1
APAF1-209ENST00000550527 HMCN2Q8NDA2 5059 aa1.95□□□□□ -2.1
APAF1-209ENST00000550527 MYCBP2O75592 4640 aa1.94□□□□□ -2.1
APAF1-209ENST00000550527 MT1HL1P0DM35 61 aa1.94□□□□□ -2.1
APAF1-209ENST00000550527 PKHD1L1Q86WI1 4243 aa1.94□□□□□ -2.1
APAF1-209ENST00000550527 HERC1Q15751 4861 aa1.94□□□□□ -2.1
APAF1-209ENST00000550527 HSPG2P98160 4391 aa1.94□□□□□ -2.1
APAF1-209ENST00000550527 KRTAP10-5P60370 271 aa1.94□□□□□ -2.1
APAF1-209ENST00000550527 DYNC1H1Q14204 4646 aaKnown RBP1.94□□□□□ -2.1
APAF1-209ENST00000550527 SSPOA2VEC9 5147 aa1.92□□□□□ -2.1
APAF1-209ENST00000550527 KRTAP8-1Q8IUC2 63 aa1.92□□□□□ -2.1
APAF1-209ENST00000550527 APOBP04114 4563 aaKnown RBP1.91□□□□□ -2.1
APAF1-209ENST00000550527 LCE3CQ5T5A8 94 aa1.9□□□□□ -2.11
APAF1-209ENST00000550527 MT3P25713 68 aa1.89□□□□□ -2.11
APAF1-209ENST00000550527 TNXBP22105 4242 aa1.89□□□□□ -2.11
APAF1-209ENST00000550527 FAT4Q6V0I7 4981 aa1.88□□□□□ -2.11
APAF1-209ENST00000550527 SPRR2GQ9BYE4 73 aa1.86□□□□□ -2.11
APAF1-209ENST00000550527 KRTAP4-1Q9BYQ7 146 aa1.85□□□□□ -2.11
APAF1-209ENST00000550527 USH2AO75445 5202 aa1.83□□□□□ -2.12
APAF1-209ENST00000550527 RNF213Q63HN8 5207 aa1.82□□□□□ -2.12
APAF1-209ENST00000550527 KRTAP19-5Q3LI72 72 aa1.81□□□□□ -2.12
APAF1-209ENST00000550527 UBR4Q5T4S7 5183 aa1.81□□□□□ -2.12
APAF1-209ENST00000550527 KRTAP12-4P60329 112 aa1.8□□□□□ -2.12
APAF1-209ENST00000550527 LRP2P98164 4655 aa1.79□□□□□ -2.12
APAF1-209ENST00000550527 LCE5AQ5TCM9 118 aa1.78□□□□□ -2.12
APAF1-209ENST00000550527 GPR98Q8WXG9 6306 aa1.77□□□□□ -2.13
APAF1-209ENST00000550527 LCE3BQ5TA77 95 aa1.75□□□□□ -2.13
APAF1-209ENST00000550527 MT1HP80294 61 aa1.72□□□□□ -2.13
APAF1-209ENST00000550527 MT2AP02795 61 aa1.71□□□□□ -2.14
APAF1-209ENST00000550527 KRTAP19-8Q3LI54 63 aa1.69□□□□□ -2.14
APAF1-209ENST00000550527 KRTAP19-1Q8IUB9 90 aa1.69□□□□□ -2.14
APAF1-209ENST00000550527 MT1XP80297 61 aa1.68□□□□□ -2.14
APAF1-209ENST00000550527 MT1FP04733 61 aa1.68□□□□□ -2.14
APAF1-209ENST00000550527 KRTAP2-2Q9BYT5 123 aa1.66□□□□□ -2.14
APAF1-209ENST00000550527 FLGP20930 4061 aaPredicted RBP1.65□□□□□ -2.14
APAF1-209ENST00000550527 MUC2Q02817 5179 aa1.65□□□□□ -2.15
APAF1-209ENST00000550527 LCE3EQ5T5B0 92 aa1.65□□□□□ -2.15
APAF1-209ENST00000550527 MUC17Q685J3 4493 aa1.64□□□□□ -2.15
APAF1-209ENST00000550527 KRTAP2-3P0C7H8 128 aa1.64□□□□□ -2.15
APAF1-209ENST00000550527 LCE3DQ9BYE3 92 aa1.64□□□□□ -2.15
APAF1-209ENST00000550527 KRTAP2-4Q9BYR9 128 aa1.64□□□□□ -2.15
APAF1-209ENST00000550527 KRTAP2-1Q9BYU5 128 aa1.64□□□□□ -2.15
APAF1-209ENST00000550527 PRM1P04553 51 aa1.63□□□□□ -2.15
APAF1-209ENST00000550527 MT1BP07438 61 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 183.5 ms