RNA–Protein interactions for RNA: ENST00000550359.6

PPFIA2-219, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 2 BASIC

Gene PPFIA2, Length 3,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-219ENST00000550359 KRTAP13-4Q3LI77 160 aa3.52□□□□□ -1.85
PPFIA2-219ENST00000550359 PCLOQ9Y6V0 5065 aa3.52□□□□□ -1.85
PPFIA2-219ENST00000550359 KRTAP1-4P0C5Y4 121 aa3.52□□□□□ -1.85
PPFIA2-219ENST00000550359 KRTAP15-1Q3LI76 137 aa3.51□□□□□ -1.85
PPFIA2-219ENST00000550359 DNAH5Q8TE73 4624 aa3.51□□□□□ -1.85
PPFIA2-219ENST00000550359 HYDINQ4G0P3 5121 aa3.5□□□□□ -1.85
PPFIA2-219ENST00000550359 VPS13BQ7Z7G8 4022 aa3.49□□□□□ -1.85
PPFIA2-219ENST00000550359 SACSQ9NZJ4 4579 aa3.49□□□□□ -1.85
PPFIA2-219ENST00000550359 KRTAP10-1P60331 282 aa3.47□□□□□ -1.85
PPFIA2-219ENST00000550359 LCE2BO14633 110 aa3.46□□□□□ -1.86
PPFIA2-219ENST00000550359 FAT2Q9NYQ8 4349 aa3.46□□□□□ -1.86
PPFIA2-219ENST00000550359 KRTAP10-6P60371 365 aaPredicted RBP3.46□□□□□ -1.86
PPFIA2-219ENST00000550359 KRTAP12-2P59991 146 aa3.42□□□□□ -1.86
PPFIA2-219ENST00000550359 S4R3F8 94 aa3.42□□□□□ -1.86
PPFIA2-219ENST00000550359 LCE2CQ5TA81 110 aa3.4□□□□□ -1.87
PPFIA2-219ENST00000550359 SMR3BP02814 79 aaPredicted RBP3.39□□□□□ -1.87
PPFIA2-219ENST00000550359 PKD1P98161 4303 aa3.36□□□□□ -1.87
PPFIA2-219ENST00000550359 LUZP6Q538Z0 58 aa3.35□□□□□ -1.87
PPFIA2-219ENST00000550359 RYR1P21817 5038 aa3.35□□□□□ -1.87
PPFIA2-219ENST00000550359 KRTAP12-1P59990 96 aa3.34□□□□□ -1.88
PPFIA2-219ENST00000550359 KRTAP10-8P60410 259 aa3.33□□□□□ -1.88
PPFIA2-219ENST00000550359 FAT1Q14517 4588 aa3.33□□□□□ -1.88
PPFIA2-219ENST00000550359 PKHD1P08F94 4074 aa3.33□□□□□ -1.88
PPFIA2-219ENST00000550359 XP32Q5T750 250 aa3.31□□□□□ -1.88
PPFIA2-219ENST00000550359 MYCBP2O75592 4640 aa3.3□□□□□ -1.88
PPFIA2-219ENST00000550359 RPS29P62273 56 aaKnown RBP3.3□□□□□ -1.88
PPFIA2-219ENST00000550359 HSPG2P98160 4391 aa3.28□□□□□ -1.88
PPFIA2-219ENST00000550359 DYNC1H1Q14204 4646 aaKnown RBP3.28□□□□□ -1.88
PPFIA2-219ENST00000550359 LCE2AQ5TA79 106 aaPredicted RBP3.28□□□□□ -1.88
PPFIA2-219ENST00000550359 PLAC4Q8WY50 150 aa3.27□□□□□ -1.89
PPFIA2-219ENST00000550359 APOBP04114 4563 aaKnown RBP3.27□□□□□ -1.89
PPFIA2-219ENST00000550359 PKHD1L1Q86WI1 4243 aa3.23□□□□□ -1.89
PPFIA2-219ENST00000550359 ABCA13Q86UQ4 5058 aa3.23□□□□□ -1.89
PPFIA2-219ENST00000550359 LRP1Q07954 4544 aaKnown RBP3.22□□□□□ -1.89
PPFIA2-219ENST00000550359 FAT3Q8TDW7 4589 aa3.2□□□□□ -1.9
PPFIA2-219ENST00000550359 LPAP08519 4548 aa3.2□□□□□ -1.9
PPFIA2-219ENST00000550359 M0QZ58 72 aa3.19□□□□□ -1.9
PPFIA2-219ENST00000550359 KIAA1109Q2LD37 5005 aa3.18□□□□□ -1.9
PPFIA2-219ENST00000550359 KRTAP10-4P60372 401 aaPredicted RBP3.15□□□□□ -1.91
PPFIA2-219ENST00000550359 R4GN34 69 aa3.15□□□□□ -1.91
PPFIA2-219ENST00000550359 SEC61BP60468 96 aaKnown RBP3.12□□□□□ -1.91
PPFIA2-219ENST00000550359 UBR4Q5T4S7 5183 aa3.11□□□□□ -1.91
PPFIA2-219ENST00000550359 LORP23490 312 aaPredicted RBP3.11□□□□□ -1.91
PPFIA2-219ENST00000550359 KRTAP4-5Q9BYR2 181 aa3.11□□□□□ -1.91
PPFIA2-219ENST00000550359 HERC1Q15751 4861 aa3.11□□□□□ -1.91
PPFIA2-219ENST00000550359 TNXBP22105 4242 aa3.1□□□□□ -1.91
PPFIA2-219ENST00000550359 A0A1B0GVY2 172 aa3.1□□□□□ -1.91
PPFIA2-219ENST00000550359 LRP2P98164 4655 aa3.1□□□□□ -1.91
PPFIA2-219ENST00000550359 KRTAP9-6A0A140TA67 174 aa3.05□□□□□ -1.92
PPFIA2-219ENST00000550359 CAMK2N1Q7Z7J9 78 aa3.05□□□□□ -1.92
PPFIA2-219ENST00000550359 HMCN2Q8NDA2 5059 aa2.99□□□□□ -1.93
PPFIA2-219ENST00000550359 PP632Q6XCG6 107 aa2.99□□□□□ -1.93
PPFIA2-219ENST00000550359 KRTAP9-2Q9BYQ4 174 aa2.99□□□□□ -1.93
PPFIA2-219ENST00000550359 Q5VSD8 79 aa2.98□□□□□ -1.93
PPFIA2-219ENST00000550359 MT1HL1P0DM35 61 aa2.9□□□□□ -1.94
PPFIA2-219ENST00000550359 TNP1P09430 55 aa2.9□□□□□ -1.95
PPFIA2-219ENST00000550359 SPRR5A0A1B0GTR4 108 aa2.88□□□□□ -1.95
PPFIA2-219ENST00000550359 FAT4Q6V0I7 4981 aa2.88□□□□□ -1.95
PPFIA2-219ENST00000550359 PRO2289Q9P1D8 64 aa2.87□□□□□ -1.95
PPFIA2-219ENST00000550359 KRTAP4-1Q9BYQ7 146 aa2.85□□□□□ -1.95
PPFIA2-219ENST00000550359 RNF213Q63HN8 5207 aa2.85□□□□□ -1.95
PPFIA2-219ENST00000550359 MUC2Q02817 5179 aa2.85□□□□□ -1.95
PPFIA2-219ENST00000550359 MUC17Q685J3 4493 aa2.84□□□□□ -1.95
PPFIA2-219ENST00000550359 CRCT1Q9UGL9 99 aa2.76□□□□□ -1.97
PPFIA2-219ENST00000550359 LCE3AQ5TA76 89 aa2.76□□□□□ -1.97
PPFIA2-219ENST00000550359 KRTAP23-1A1A580 65 aa2.74□□□□□ -1.97
PPFIA2-219ENST00000550359 INE1O15225 51 aa2.74□□□□□ -1.97
PPFIA2-219ENST00000550359 KRTAP19-2Q3LHN2 52 aa2.73□□□□□ -1.97
PPFIA2-219ENST00000550359 FLGP20930 4061 aaPredicted RBP2.69□□□□□ -1.98
PPFIA2-219ENST00000550359 KRTAP9-7A8MTY7 169 aa2.67□□□□□ -1.98
PPFIA2-219ENST00000550359 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.61□□□□□ -1.99
PPFIA2-219ENST00000550359 KRTAP19-1Q8IUB9 90 aa2.61□□□□□ -1.99
PPFIA2-219ENST00000550359 KRTAP8-1Q8IUC2 63 aa2.59□□□□□ -2
PPFIA2-219ENST00000550359 KRTAP12-3P60328 96 aa2.58□□□□□ -2
PPFIA2-219ENST00000550359 M0R2T5 61 aa2.57□□□□□ -2
PPFIA2-219ENST00000550359 SPRR2GQ9BYE4 73 aa2.57□□□□□ -2
PPFIA2-219ENST00000550359 KRTAP10-12P60413 245 aa2.56□□□□□ -2
PPFIA2-219ENST00000550359 SSPOA2VEC9 5147 aa2.54□□□□□ -2
PPFIA2-219ENST00000550359 KRTAP10-10P60014 251 aa2.53□□□□□ -2
PPFIA2-219ENST00000550359 KRTAP10-7P60409 375 aaPredicted RBP2.49□□□□□ -2.01
PPFIA2-219ENST00000550359 KRTAP10-5P60370 271 aa2.49□□□□□ -2.01
PPFIA2-219ENST00000550359 MT1FP04733 61 aa2.49□□□□□ -2.01
PPFIA2-219ENST00000550359 MT1XP80297 61 aa2.48□□□□□ -2.01
PPFIA2-219ENST00000550359 KMT2DO14686 5537 aa2.48□□□□□ -2.01
PPFIA2-219ENST00000550359 LCE4AQ5TA78 99 aa2.47□□□□□ -2.01
PPFIA2-219ENST00000550359 MT2AP02795 61 aa2.45□□□□□ -2.02
PPFIA2-219ENST00000550359 MT1BP07438 61 aa2.43□□□□□ -2.02
PPFIA2-219ENST00000550359 LCE3CQ5T5A8 94 aa2.43□□□□□ -2.02
PPFIA2-219ENST00000550359 KRTAP9-6A8MVA2 160 aa2.42□□□□□ -2.02
PPFIA2-219ENST00000550359 KRTAP19-5Q3LI72 72 aa2.42□□□□□ -2.02
PPFIA2-219ENST00000550359 MT1HP80294 61 aa2.41□□□□□ -2.02
PPFIA2-219ENST00000550359 KRTAP19-8Q3LI54 63 aa2.39□□□□□ -2.03
PPFIA2-219ENST00000550359 KRTAP9-8Q9BYQ0 159 aa2.39□□□□□ -2.03
PPFIA2-219ENST00000550359 KRTAP19-4Q3LI73 84 aa2.39□□□□□ -2.03
PPFIA2-219ENST00000550359 KRTAP4-7Q9BYR0 210 aa2.38□□□□□ -2.03
PPFIA2-219ENST00000550359 KRTAP6-3Q3LI67 103 aa2.38□□□□□ -2.03
PPFIA2-219ENST00000550359 USH2AO75445 5202 aa2.37□□□□□ -2.03
PPFIA2-219ENST00000550359 KRTAP4-8A0A0G2JLE6 195 aa2.33□□□□□ -2.04
PPFIA2-219ENST00000550359 KRTAP4-8Q9BYQ9 185 aa2.33□□□□□ -2.04
PPFIA2-219ENST00000550359 KRTAP2-3P0C7H8 128 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms