RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 A0A1W2PPM0 123 aa4.87□□□□□ -1.63
SMARCD1-208ENST00000550280 BATFQ16520 125 aa4.87□□□□□ -1.63
SMARCD1-208ENST00000550280 TSTD3H0UI37 97 aa4.86□□□□□ -1.63
SMARCD1-208ENST00000550280 KRTAP2-2Q9BYT5 123 aa4.86□□□□□ -1.63
SMARCD1-208ENST00000550280 KRTAP2-1Q9BYU5 128 aa4.86□□□□□ -1.63
SMARCD1-208ENST00000550280 KRTAP8-1Q8IUC2 63 aa4.83□□□□□ -1.64
SMARCD1-208ENST00000550280 CYP4F30PQ9H0H9 118 aa4.83□□□□□ -1.64
SMARCD1-208ENST00000550280 TP53AIP1Q9HCN2 124 aa4.81□□□□□ -1.64
SMARCD1-208ENST00000550280 KRTAP4-8A0A0G2JLE6 195 aa4.8□□□□□ -1.64
SMARCD1-208ENST00000550280 H0YAA0 97 aa4.8□□□□□ -1.64
SMARCD1-208ENST00000550280 KRTAP4-8Q9BYQ9 185 aa4.8□□□□□ -1.64
SMARCD1-208ENST00000550280 UBL5Q9BZL1 73 aa4.8□□□□□ -1.64
SMARCD1-208ENST00000550280 PRO0461Q9UI25 63 aa4.79□□□□□ -1.64
SMARCD1-208ENST00000550280 K7EP34 96 aa4.78□□□□□ -1.64
SMARCD1-208ENST00000550280 SMIM6P0DI80 62 aa4.78□□□□□ -1.64
SMARCD1-208ENST00000550280 KRTAP12-2P59991 146 aa4.78□□□□□ -1.64
SMARCD1-208ENST00000550280 SPRR2DP22532 72 aa4.77□□□□□ -1.65
SMARCD1-208ENST00000550280 PRO2289Q9P1D8 64 aa4.77□□□□□ -1.65
SMARCD1-208ENST00000550280 SPCS1Q9Y6A9 102 aa4.76□□□□□ -1.65
SMARCD1-208ENST00000550280 A8MUN3 132 aa4.75□□□□□ -1.65
SMARCD1-208ENST00000550280 ADM2Q7Z4H4 148 aa4.75□□□□□ -1.65
SMARCD1-208ENST00000550280 NDUFC1O43677 76 aa4.72□□□□□ -1.65
SMARCD1-208ENST00000550280 TRAV22A0A0B4J277 110 aa4.71□□□□□ -1.66
SMARCD1-208ENST00000550280 LOC101927531A0A1B0GV80 90 aa4.71□□□□□ -1.66
SMARCD1-208ENST00000550280 KRTAP10-7P60409 375 aaPredicted RBP4.68□□□□□ -1.66
SMARCD1-208ENST00000550280 PLAC4Q8WY50 150 aa4.68□□□□□ -1.66
SMARCD1-208ENST00000550280 LCE3BQ5TA77 95 aa4.67□□□□□ -1.66
SMARCD1-208ENST00000550280 P0C880 135 aa4.66□□□□□ -1.66
SMARCD1-208ENST00000550280 KRTAP10-12P60413 245 aa4.63□□□□□ -1.67
SMARCD1-208ENST00000550280 GPR98Q8WXG9 6306 aa4.61□□□□□ -1.67
SMARCD1-208ENST00000550280 H0Y9P7 68 aa4.6□□□□□ -1.67
SMARCD1-208ENST00000550280 ACYP1P07311 99 aa4.6□□□□□ -1.67
SMARCD1-208ENST00000550280 R4GN34 69 aa4.6□□□□□ -1.67
SMARCD1-208ENST00000550280 LOC105371267A0A1B0GV96 52 aa4.58□□□□□ -1.68
SMARCD1-208ENST00000550280 M0QZ58 72 aa4.58□□□□□ -1.68
SMARCD1-208ENST00000550280 ETDBQ3ZM63 59 aa4.58□□□□□ -1.68
SMARCD1-208ENST00000550280 UQCRQO14949 82 aa4.57□□□□□ -1.68
SMARCD1-208ENST00000550280 ATOX1O00244 68 aa4.55□□□□□ -1.68
SMARCD1-208ENST00000550280 COL5A1-AS1Q5SY13 56 aa4.55□□□□□ -1.68
SMARCD1-208ENST00000550280 DSTQ03001 7570 aaKnown RBP4.54□□□□□ -1.68
SMARCD1-208ENST00000550280 LINC01554Q52M75 96 aa4.53□□□□□ -1.68
SMARCD1-208ENST00000550280 F8W1H4 67 aa4.51□□□□□ -1.69
SMARCD1-208ENST00000550280 LINC00208Q96KT6 92 aa4.51□□□□□ -1.69
SMARCD1-208ENST00000550280 HIST1H4AP62805 103 aaKnown RBP4.49□□□□□ -1.69
SMARCD1-208ENST00000550280 C20orf197Q8N268 126 aa4.49□□□□□ -1.69
SMARCD1-208ENST00000550280 KRTAP4-9Q9BYQ8 210 aa4.47□□□□□ -1.69
SMARCD1-208ENST00000550280 ATP5EP2Q5VTU8 51 aa4.46□□□□□ -1.7
SMARCD1-208ENST00000550280 GTF2H5Q6ZYL4 71 aa4.46□□□□□ -1.7
SMARCD1-208ENST00000550280 OCR1Q9BZK8 76 aa4.44□□□□□ -1.7
SMARCD1-208ENST00000550280 DMAC1Q96GE9 116 aa4.43□□□□□ -1.7
SMARCD1-208ENST00000550280 FAM240AA0A1B0GVK7 77 aa4.42□□□□□ -1.7
SMARCD1-208ENST00000550280 LCE5AQ5TCM9 118 aa4.41□□□□□ -1.7
SMARCD1-208ENST00000550280 KRTAP19-7Q3SYF9 63 aa4.4□□□□□ -1.71
SMARCD1-208ENST00000550280 KRTAP4-12Q9BQ66 201 aa4.39□□□□□ -1.71
SMARCD1-208ENST00000550280 MP68P56378 58 aa4.38□□□□□ -1.71
SMARCD1-208ENST00000550280 MT1EP04732 61 aa4.35□□□□□ -1.71
SMARCD1-208ENST00000550280 KRTAP19-3Q7Z4W3 81 aa4.34□□□□□ -1.71
SMARCD1-208ENST00000550280 LCE1DQ5T752 114 aa4.33□□□□□ -1.72
SMARCD1-208ENST00000550280 LINC00643Q86TS7 51 aa4.33□□□□□ -1.72
SMARCD1-208ENST00000550280 H3BS24 57 aa4.32□□□□□ -1.72
SMARCD1-208ENST00000550280 MT-ATP8P03928 68 aa4.32□□□□□ -1.72
SMARCD1-208ENST00000550280 HMCN1Q96RW7 5635 aa4.31□□□□□ -1.72
SMARCD1-208ENST00000550280 H3BPC8 53 aa4.29□□□□□ -1.72
SMARCD1-208ENST00000550280 TRAV7A0A075B6U4 112 aa4.28□□□□□ -1.72
SMARCD1-208ENST00000550280 KRTAP13-4Q3LI77 160 aa4.28□□□□□ -1.72
SMARCD1-208ENST00000550280 AHNAK2Q8IVF2 5795 aa4.27□□□□□ -1.73
SMARCD1-208ENST00000550280 PCP4L1A6NKN8 68 aa4.24□□□□□ -1.73
SMARCD1-208ENST00000550280 KRTAP9-9Q9BYP9 154 aa4.24□□□□□ -1.73
SMARCD1-208ENST00000550280 KRTAP9-4Q9BYQ2 154 aa4.24□□□□□ -1.73
SMARCD1-208ENST00000550280 CYSTM1Q9H1C7 97 aa4.23□□□□□ -1.73
SMARCD1-208ENST00000550280 MT4P47944 62 aa4.21□□□□□ -1.74
SMARCD1-208ENST00000550280 ACYP2P14621 99 aa4.2□□□□□ -1.74
SMARCD1-208ENST00000550280 LCE4AQ5TA78 99 aa4.19□□□□□ -1.74
SMARCD1-208ENST00000550280 MT1GP13640 62 aa4.18□□□□□ -1.74
SMARCD1-208ENST00000550280 KRTAP19-5Q3LI72 72 aa4.18□□□□□ -1.74
SMARCD1-208ENST00000550280 KRTAP5-10Q6L8G5 202 aa4.17□□□□□ -1.74
SMARCD1-208ENST00000550280 CAMK2N1Q7Z7J9 78 aa4.17□□□□□ -1.74
SMARCD1-208ENST00000550280 MT1MQ8N339 61 aa4.16□□□□□ -1.74
SMARCD1-208ENST00000550280 SPTSSBQ8NFR3 76 aa4.15□□□□□ -1.75
SMARCD1-208ENST00000550280 KRTAP5-4Q6L8H1 288 aa4.14□□□□□ -1.75
SMARCD1-208ENST00000550280 A0A0D9SG42 100 aa4.12□□□□□ -1.75
SMARCD1-208ENST00000550280 SCGB1A1P11684 91 aa4.12□□□□□ -1.75
SMARCD1-208ENST00000550280 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
SMARCD1-208ENST00000550280 KRTAP19-4Q3LI73 84 aa4.11□□□□□ -1.75
SMARCD1-208ENST00000550280 MT1LQ93083 61 aa4.11□□□□□ -1.75
SMARCD1-208ENST00000550280 CHKB-CPT1BH3BT56 60 aa4.09□□□□□ -1.75
SMARCD1-208ENST00000550280 PP632Q6XCG6 107 aa4.08□□□□□ -1.76
SMARCD1-208ENST00000550280 A0A1B0GV90 55 aa4.02□□□□□ -1.77
SMARCD1-208ENST00000550280 KRTAP5-7Q6L8G8 165 aa4.02□□□□□ -1.77
SMARCD1-208ENST00000550280 KRTAP5-3Q6L8H2 238 aa4□□□□□ -1.77
SMARCD1-208ENST00000550280 KRTAP4-7Q9BYR0 210 aa4□□□□□ -1.77
SMARCD1-208ENST00000550280 SNURFQ9Y675 71 aa4□□□□□ -1.77
SMARCD1-208ENST00000550280 SPATA8Q6RVD6 105 aa3.99□□□□□ -1.77
SMARCD1-208ENST00000550280 KRTAP12-1P59990 96 aa3.98□□□□□ -1.77
SMARCD1-208ENST00000550280 C10orf95Q9H7T3 257 aa3.96□□□□□ -1.78
SMARCD1-208ENST00000550280 LCE3AQ5TA76 89 aa3.95□□□□□ -1.78
SMARCD1-208ENST00000550280 SPINT4Q6UDR6 99 aa3.95□□□□□ -1.78
SMARCD1-208ENST00000550280 SPANXA2-OT1Q8N9U9 137 aa3.95□□□□□ -1.78
SMARCD1-208ENST00000550280 J3QR89 54 aa3.93□□□□□ -1.78
SMARCD1-208ENST00000550280 SMIM20Q8N5G0 67 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms