RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 KMT2CQ8NEZ4 4911 aaKnown RBP6.6□□□□□ -1.35
CALCOCO1-217ENST00000549935 KRTAP3-3Q9BYR6 98 aa6.6□□□□□ -1.35
CALCOCO1-217ENST00000549935 CRIPTQ9P021 101 aa6.59□□□□□ -1.35
CALCOCO1-217ENST00000549935 LRP1Q07954 4544 aaKnown RBP6.59□□□□□ -1.36
CALCOCO1-217ENST00000549935 KRTAP3-2Q9BYR7 98 aa6.56□□□□□ -1.36
CALCOCO1-217ENST00000549935 P0C880 135 aa6.56□□□□□ -1.36
CALCOCO1-217ENST00000549935 KRTAP13-4Q3LI77 160 aa6.55□□□□□ -1.36
CALCOCO1-217ENST00000549935 FAT3Q8TDW7 4589 aa6.54□□□□□ -1.36
CALCOCO1-217ENST00000549935 TNXBP22105 4242 aa6.54□□□□□ -1.36
CALCOCO1-217ENST00000549935 TPRXLQ17RH7 258 aa6.51□□□□□ -1.37
CALCOCO1-217ENST00000549935 KRTAP10-8P60410 259 aa6.5□□□□□ -1.37
CALCOCO1-217ENST00000549935 DMBT1Q9UGM3 2413 aaPredicted RBP6.5□□□□□ -1.37
CALCOCO1-217ENST00000549935 HSPG2P98160 4391 aa6.5□□□□□ -1.37
CALCOCO1-217ENST00000549935 Q5VSD8 79 aa6.49□□□□□ -1.37
CALCOCO1-217ENST00000549935 S4R3F8 94 aa6.47□□□□□ -1.37
CALCOCO1-217ENST00000549935 A0A0D9SG42 100 aa6.46□□□□□ -1.37
CALCOCO1-217ENST00000549935 XP32Q5T750 250 aa6.46□□□□□ -1.37
CALCOCO1-217ENST00000549935 MYCBP2O75592 4640 aa6.46□□□□□ -1.38
CALCOCO1-217ENST00000549935 RYR3Q15413 4870 aa6.44□□□□□ -1.38
CALCOCO1-217ENST00000549935 SPINT4Q6UDR6 99 aa6.43□□□□□ -1.38
CALCOCO1-217ENST00000549935 KRTAP15-1Q3LI76 137 aa6.38□□□□□ -1.39
CALCOCO1-217ENST00000549935 KRTAP12-2P59991 146 aa6.37□□□□□ -1.39
CALCOCO1-217ENST00000549935 KRTAP17-1Q9BYP8 105 aa6.37□□□□□ -1.39
CALCOCO1-217ENST00000549935 C10orf95Q9H7T3 257 aa6.37□□□□□ -1.39
CALCOCO1-217ENST00000549935 RYR1P21817 5038 aa6.36□□□□□ -1.39
CALCOCO1-217ENST00000549935 KRTAP12-1P59990 96 aa6.34□□□□□ -1.39
CALCOCO1-217ENST00000549935 MT1HL1P0DM35 61 aa6.31□□□□□ -1.4
CALCOCO1-217ENST00000549935 KIAA1109Q2LD37 5005 aa6.31□□□□□ -1.4
CALCOCO1-217ENST00000549935 M0QZ58 72 aa6.29□□□□□ -1.4
CALCOCO1-217ENST00000549935 LPAP08519 4548 aa6.29□□□□□ -1.4
CALCOCO1-217ENST00000549935 LRP2P98164 4655 aa6.23□□□□□ -1.41
CALCOCO1-217ENST00000549935 NDUFAF8A1L188 74 aa6.23□□□□□ -1.41
CALCOCO1-217ENST00000549935 EPPK1P58107 5090 aaKnown RBP6.19□□□□□ -1.42
CALCOCO1-217ENST00000549935 ABCA13Q86UQ4 5058 aa6.14□□□□□ -1.43
CALCOCO1-217ENST00000549935 BIRC6Q9NR09 4857 aa6.04□□□□□ -1.44
CALCOCO1-217ENST00000549935 KRTAP4-5Q9BYR2 181 aa6.03□□□□□ -1.44
CALCOCO1-217ENST00000549935 R4GN34 69 aa6□□□□□ -1.45
CALCOCO1-217ENST00000549935 PLAC4Q8WY50 150 aa5.96□□□□□ -1.46
CALCOCO1-217ENST00000549935 SEC61BP60468 96 aaKnown RBP5.95□□□□□ -1.46
CALCOCO1-217ENST00000549935 HERC2O95714 4834 aa5.92□□□□□ -1.46
CALCOCO1-217ENST00000549935 MUC17Q685J3 4493 aa5.91□□□□□ -1.46
CALCOCO1-217ENST00000549935 KRTAP4-1Q9BYQ7 146 aa5.9□□□□□ -1.47
CALCOCO1-217ENST00000549935 PP632Q6XCG6 107 aa5.89□□□□□ -1.47
CALCOCO1-217ENST00000549935 LORP23490 312 aaPredicted RBP5.89□□□□□ -1.47
CALCOCO1-217ENST00000549935 J3QL48 77 aa5.84□□□□□ -1.47
CALCOCO1-217ENST00000549935 PCLOQ9Y6V0 5065 aa5.8□□□□□ -1.48
CALCOCO1-217ENST00000549935 KRTAP19-2Q3LHN2 52 aa5.77□□□□□ -1.49
CALCOCO1-217ENST00000549935 MUC2Q02817 5179 aa5.77□□□□□ -1.49
CALCOCO1-217ENST00000549935 LUZP6Q538Z0 58 aa5.75□□□□□ -1.49
CALCOCO1-217ENST00000549935 CAMK2N1Q7Z7J9 78 aa5.71□□□□□ -1.5
CALCOCO1-217ENST00000549935 KRTAP23-1A1A580 65 aa5.69□□□□□ -1.5
CALCOCO1-217ENST00000549935 A0A0A0MQY5 61 aa5.63□□□□□ -1.51
CALCOCO1-217ENST00000549935 FLGP20930 4061 aaPredicted RBP5.61□□□□□ -1.51
CALCOCO1-217ENST00000549935 SPRR5A0A1B0GTR4 108 aa5.6□□□□□ -1.51
CALCOCO1-217ENST00000549935 TNP1P09430 55 aa5.59□□□□□ -1.52
CALCOCO1-217ENST00000549935 HERC1Q15751 4861 aa5.56□□□□□ -1.52
CALCOCO1-217ENST00000549935 HMCN2Q8NDA2 5059 aa5.55□□□□□ -1.52
CALCOCO1-217ENST00000549935 FAT4Q6V0I7 4981 aa5.48□□□□□ -1.53
CALCOCO1-217ENST00000549935 LCE2CQ5TA81 110 aa5.42□□□□□ -1.54
CALCOCO1-217ENST00000549935 SPRR2GQ9BYE4 73 aa5.35□□□□□ -1.55
CALCOCO1-217ENST00000549935 M0R2T5 61 aa5.34□□□□□ -1.55
CALCOCO1-217ENST00000549935 KRTAP19-1Q8IUB9 90 aa5.32□□□□□ -1.56
CALCOCO1-217ENST00000549935 RNF213Q63HN8 5207 aa5.31□□□□□ -1.56
CALCOCO1-217ENST00000549935 UBR4Q5T4S7 5183 aa5.28□□□□□ -1.56
CALCOCO1-217ENST00000549935 MT1HP80294 61 aa5.28□□□□□ -1.56
CALCOCO1-217ENST00000549935 MT1FP04733 61 aa5.22□□□□□ -1.57
CALCOCO1-217ENST00000549935 KRTAP10-10P60014 251 aa5.22□□□□□ -1.57
CALCOCO1-217ENST00000549935 LCE3AQ5TA76 89 aa5.22□□□□□ -1.57
CALCOCO1-217ENST00000549935 MT2AP02795 61 aa5.2□□□□□ -1.58
CALCOCO1-217ENST00000549935 KRTAP8-1Q8IUC2 63 aa5.18□□□□□ -1.58
CALCOCO1-217ENST00000549935 PRO2289Q9P1D8 64 aa5.17□□□□□ -1.58
CALCOCO1-217ENST00000549935 KRTAP9-8Q9BYQ0 159 aa5.15□□□□□ -1.58
CALCOCO1-217ENST00000549935 INE1O15225 51 aa5.13□□□□□ -1.59
CALCOCO1-217ENST00000549935 KRTAP19-8Q3LI54 63 aa5.08□□□□□ -1.6
CALCOCO1-217ENST00000549935 MT1BP07438 61 aa5.04□□□□□ -1.6
CALCOCO1-217ENST00000549935 KRTAP10-5P60370 271 aa5.03□□□□□ -1.6
CALCOCO1-217ENST00000549935 MT1XP80297 61 aa5.02□□□□□ -1.61
CALCOCO1-217ENST00000549935 KRTAP12-3P60328 96 aa4.99□□□□□ -1.61
CALCOCO1-217ENST00000549935 KRTAP10-12P60413 245 aa4.95□□□□□ -1.62
CALCOCO1-217ENST00000549935 KRTAP9-3Q9BYQ3 159 aa4.93□□□□□ -1.62
CALCOCO1-217ENST00000549935 KRTAP10-7P60409 375 aaPredicted RBP4.9□□□□□ -1.62
CALCOCO1-217ENST00000549935 LCE2DQ5TA82 110 aaPredicted RBP4.84□□□□□ -1.63
CALCOCO1-217ENST00000549935 USH2AO75445 5202 aa4.76□□□□□ -1.65
CALCOCO1-217ENST00000549935 LCE2AQ5TA79 106 aaPredicted RBP4.75□□□□□ -1.65
CALCOCO1-217ENST00000549935 LCE2BO14633 110 aa4.75□□□□□ -1.65
CALCOCO1-217ENST00000549935 LCE3CQ5T5A8 94 aa4.73□□□□□ -1.65
CALCOCO1-217ENST00000549935 KRTAP19-5Q3LI72 72 aa4.7□□□□□ -1.66
CALCOCO1-217ENST00000549935 KMT2DO14686 5537 aa4.69□□□□□ -1.66
CALCOCO1-217ENST00000549935 KRTAP4-8A0A0G2JLE6 195 aa4.6□□□□□ -1.67
CALCOCO1-217ENST00000549935 KRTAP4-8Q9BYQ9 185 aa4.6□□□□□ -1.67
CALCOCO1-217ENST00000549935 KRTAP2-3P0C7H8 128 aa4.55□□□□□ -1.68
CALCOCO1-217ENST00000549935 KRTAP19-4Q3LI73 84 aa4.55□□□□□ -1.68
CALCOCO1-217ENST00000549935 KRTAP2-4Q9BYR9 128 aa4.55□□□□□ -1.68
CALCOCO1-217ENST00000549935 KRTAP2-1Q9BYU5 128 aa4.55□□□□□ -1.68
CALCOCO1-217ENST00000549935 KRTAP9-6A8MVA2 160 aa4.54□□□□□ -1.68
CALCOCO1-217ENST00000549935 KRTAP19-7Q3SYF9 63 aa4.47□□□□□ -1.69
CALCOCO1-217ENST00000549935 FSIP2Q5CZC0 6907 aa4.43□□□□□ -1.7
CALCOCO1-217ENST00000549935 KRTAP9-2Q9BYQ4 174 aa4.43□□□□□ -1.7
CALCOCO1-217ENST00000549935 KRTAP4-7Q9BYR0 210 aa4.43□□□□□ -1.7
CALCOCO1-217ENST00000549935 SSPOA2VEC9 5147 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms