RNA–Protein interactions for RNA: ENST00000549738.5

GNPTAB-205, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 4

Gene GNPTAB, Length 550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-205ENST00000549738 MDN1Q9NU22 5596 aa0.8□□□□□ -2.28
GNPTAB-205ENST00000549738 A8MTW9 85 aa0.8□□□□□ -2.28
GNPTAB-205ENST00000549738 MXRA5Q9NR99 2828 aa0.8□□□□□ -2.28
GNPTAB-205ENST00000549738 CEP290O15078 2479 aa0.8□□□□□ -2.28
GNPTAB-205ENST00000549738 LYSTQ99698 3801 aa0.79□□□□□ -2.28
GNPTAB-205ENST00000549738 MUC5ACP98088 5654 aa0.79□□□□□ -2.28
GNPTAB-205ENST00000549738 KRTAP5-10Q6L8G5 202 aa0.78□□□□□ -2.28
GNPTAB-205ENST00000549738 ACACBO00763 2458 aa0.77□□□□□ -2.29
GNPTAB-205ENST00000549738 STAB2Q8WWQ8 2551 aa0.77□□□□□ -2.29
GNPTAB-205ENST00000549738 HUWE1Q7Z6Z7 4374 aaKnown RBP0.77□□□□□ -2.29
GNPTAB-205ENST00000549738 XIRP2A4UGR9 3374 aa0.76□□□□□ -2.29
GNPTAB-205ENST00000549738 ARHGAP5-AS1Q96IT6 56 aa0.76□□□□□ -2.29
GNPTAB-205ENST00000549738 SMG1Q96Q15 3661 aaKnown RBP0.76□□□□□ -2.29
GNPTAB-205ENST00000549738 CRYBG3Q68DQ2 2970 aa0.76□□□□□ -2.29
GNPTAB-205ENST00000549738 SONP18583 2426 aaKnown RBP0.75□□□□□ -2.29
GNPTAB-205ENST00000549738 C9orf92A6NGG3 77 aa0.75□□□□□ -2.29
GNPTAB-205ENST00000549738 M0QZ58 72 aa0.75□□□□□ -2.29
GNPTAB-205ENST00000549738 SRRM2Q9UQ35 2752 aaKnown RBP0.75□□□□□ -2.29
GNPTAB-205ENST00000549738 TLN2Q9Y4G6 2542 aa0.75□□□□□ -2.29
GNPTAB-205ENST00000549738 DNAH14Q0VDD8 3507 aa0.75□□□□□ -2.29
GNPTAB-205ENST00000549738 NF1P21359 2839 aa0.74□□□□□ -2.29
GNPTAB-205ENST00000549738 MTORP42345 2549 aa0.74□□□□□ -2.29
GNPTAB-205ENST00000549738 VPS13BQ7Z7G8 4022 aa0.74□□□□□ -2.29
GNPTAB-205ENST00000549738 KRTAP21-1Q3LI58 79 aa0.74□□□□□ -2.29
GNPTAB-205ENST00000549738 LEAP2Q969E1 77 aa0.74□□□□□ -2.29
GNPTAB-205ENST00000549738 VPS13AQ96RL7 3174 aa0.73□□□□□ -2.29
GNPTAB-205ENST00000549738 NBPF19A0A087WUL8 3843 aa0.73□□□□□ -2.29
GNPTAB-205ENST00000549738 SACSQ9NZJ4 4579 aa0.73□□□□□ -2.29
GNPTAB-205ENST00000549738 CDH23Q9H251 3354 aa0.73□□□□□ -2.29
GNPTAB-205ENST00000549738 NIPBLQ6KC79 2804 aaeCLIP0.73□□□□□ -2.29
GNPTAB-205ENST00000549738 KRTAP20-1Q3LI63 56 aa0.73□□□□□ -2.29
GNPTAB-205ENST00000549738 KMT2AQ03164 3969 aa0.73□□□□□ -2.29
GNPTAB-205ENST00000549738 WDR87Q6ZQQ6 2873 aa0.73□□□□□ -2.29
GNPTAB-205ENST00000549738 RIF1Q5UIP0 2472 aaKnown RBP0.73□□□□□ -2.29
GNPTAB-205ENST00000549738 FAT3Q8TDW7 4589 aa0.72□□□□□ -2.29
GNPTAB-205ENST00000549738 MYO15AQ9UKN7 3530 aa0.72□□□□□ -2.29
GNPTAB-205ENST00000549738 MYCBP2O75592 4640 aa0.72□□□□□ -2.29
GNPTAB-205ENST00000549738 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
GNPTAB-205ENST00000549738 H3BNG1 76 aa0.72□□□□□ -2.29
GNPTAB-205ENST00000549738 WDFY3Q8IZQ1 3526 aa0.72□□□□□ -2.29
GNPTAB-205ENST00000549738 DNAH11Q96DT5 4516 aa0.72□□□□□ -2.29
GNPTAB-205ENST00000549738 TGP01266 2768 aa0.72□□□□□ -2.29
GNPTAB-205ENST00000549738 TENM3Q9P273 2699 aa0.71□□□□□ -2.29
GNPTAB-205ENST00000549738 COL12A1Q99715 3063 aa0.71□□□□□ -2.3
GNPTAB-205ENST00000549738 MGAM2Q2M2H8 2515 aa0.71□□□□□ -2.3
GNPTAB-205ENST00000549738 LRBAP50851 2863 aa0.71□□□□□ -2.3
GNPTAB-205ENST00000549738 CSMD2Q7Z408 3487 aa0.7□□□□□ -2.3
GNPTAB-205ENST00000549738 FRYLO94915 3013 aa0.7□□□□□ -2.3
GNPTAB-205ENST00000549738 LOC400499M0QZD8 3231 aa0.7□□□□□ -2.3
GNPTAB-205ENST00000549738 FRYQ5TBA9 3013 aa0.7□□□□□ -2.3
GNPTAB-205ENST00000549738 DMBT1Q9UGM3 2413 aaPredicted RBP0.7□□□□□ -2.3
GNPTAB-205ENST00000549738 MUC12Q9UKN1 5478 aa0.7□□□□□ -2.3
GNPTAB-205ENST00000549738 USH2AO75445 5202 aa0.69□□□□□ -2.3
GNPTAB-205ENST00000549738 TNP1P09430 55 aa0.69□□□□□ -2.3
GNPTAB-205ENST00000549738 SPRR2DP22532 72 aa0.69□□□□□ -2.3
GNPTAB-205ENST00000549738 TOMM7Q9P0U1 55 aa0.69□□□□□ -2.3
GNPTAB-205ENST00000549738 PRUNE2Q8WUY3 3088 aa0.69□□□□□ -2.3
GNPTAB-205ENST00000549738 FAM186AA6NE01 2351 aa0.69□□□□□ -2.3
GNPTAB-205ENST00000549738 SPENQ96T58 3664 aaKnown RBP0.68□□□□□ -2.3
GNPTAB-205ENST00000549738 LRP1Q07954 4544 aaKnown RBP0.68□□□□□ -2.3
GNPTAB-205ENST00000549738 SYNE1Q8NF91 8797 aaKnown RBP0.67□□□□□ -2.3
GNPTAB-205ENST00000549738 NBASA2RRP1 2371 aa0.67□□□□□ -2.3
GNPTAB-205ENST00000549738 ITPR2Q14571 2701 aa0.66□□□□□ -2.3
GNPTAB-205ENST00000549738 COL7A1Q02388 2944 aa0.66□□□□□ -2.3
GNPTAB-205ENST00000549738 ACANP16112 2415 aa0.66□□□□□ -2.3
GNPTAB-205ENST00000549738 SVEP1Q4LDE5 3571 aa0.66□□□□□ -2.3
GNPTAB-205ENST00000549738 FREM2Q5SZK8 3169 aa0.65□□□□□ -2.3
GNPTAB-205ENST00000549738 PKD1P98161 4303 aa0.65□□□□□ -2.3
GNPTAB-205ENST00000549738 HIVEP1P15822 2718 aa0.65□□□□□ -2.31
GNPTAB-205ENST00000549738 DMXL2Q8TDJ6 3036 aa0.65□□□□□ -2.31
GNPTAB-205ENST00000549738 LPAP08519 4548 aa0.65□□□□□ -2.31
GNPTAB-205ENST00000549738 CHD7Q9P2D1 2997 aa0.65□□□□□ -2.31
GNPTAB-205ENST00000549738 DMXL1Q9Y485 3027 aa0.64□□□□□ -2.31
GNPTAB-205ENST00000549738 WNK1Q9H4A3 2382 aa0.64□□□□□ -2.31
GNPTAB-205ENST00000549738 ZZEF1O43149 2961 aa0.64□□□□□ -2.31
GNPTAB-205ENST00000549738 CUBNO60494 3623 aa0.64□□□□□ -2.31
GNPTAB-205ENST00000549738 VPS13CQ709C8 3753 aa0.63□□□□□ -2.31
GNPTAB-205ENST00000549738 SPRR2BP35325 72 aa0.63□□□□□ -2.31
GNPTAB-205ENST00000549738 TTTY10Q9BZA0 68 aa0.63□□□□□ -2.31
GNPTAB-205ENST00000549738 VPS13DQ5THJ4 4388 aa0.62□□□□□ -2.31
GNPTAB-205ENST00000549738 DNAH3Q8TD57 4116 aa0.62□□□□□ -2.31
GNPTAB-205ENST00000549738 HSPG2P98160 4391 aa0.62□□□□□ -2.31
GNPTAB-205ENST00000549738 DEFB110Q30KQ9 67 aa0.62□□□□□ -2.31
GNPTAB-205ENST00000549738 TACC2O95359 2948 aa0.62□□□□□ -2.31
GNPTAB-205ENST00000549738 LRP1BQ9NZR2 4599 aa0.62□□□□□ -2.31
GNPTAB-205ENST00000549738 LAMA5O15230 3695 aa0.62□□□□□ -2.31
GNPTAB-205ENST00000549738 HRNRQ86YZ3 2850 aaPredicted RBP0.61□□□□□ -2.31
GNPTAB-205ENST00000549738 LINC01590Q5TEZ4 76 aa0.61□□□□□ -2.31
GNPTAB-205ENST00000549738 HECTD4Q9Y4D8 3996 aa0.61□□□□□ -2.31
GNPTAB-205ENST00000549738 ATMQ13315 3056 aa0.61□□□□□ -2.31
GNPTAB-205ENST00000549738 DNAH1Q9P2D7 4330 aa0.6□□□□□ -2.31
GNPTAB-205ENST00000549738 PKHD1L1Q86WI1 4243 aa0.6□□□□□ -2.31
GNPTAB-205ENST00000549738 DYNC2H1Q8NCM8 4307 aaKnown RBP0.6□□□□□ -2.31
GNPTAB-205ENST00000549738 DNAH2Q9P225 4427 aa0.59□□□□□ -2.31
GNPTAB-205ENST00000549738 CENPEQ02224 2701 aa0.59□□□□□ -2.32
GNPTAB-205ENST00000549738 ANK3Q12955 4377 aaKnown RBP0.59□□□□□ -2.32
GNPTAB-205ENST00000549738 PRCDQ00LT1 54 aa0.58□□□□□ -2.32
GNPTAB-205ENST00000549738 TRIOO75962 3097 aa0.58□□□□□ -2.32
GNPTAB-205ENST00000549738 APC2O95996 2303 aa0.58□□□□□ -2.32
GNPTAB-205ENST00000549738 DCHS2Q6V1P9 2916 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms