RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 USP9YO00507 2555 aaPredicted RBP-0.82□□□□□ -2.54
SNRPF-202ENST00000549580 RYR1P21817 5038 aa-0.82□□□□□ -2.54
SNRPF-202ENST00000549580 KRTAP8-1Q8IUC2 63 aa-0.82□□□□□ -2.54
SNRPF-202ENST00000549580 WDR87Q6ZQQ6 2873 aa-0.82□□□□□ -2.54
SNRPF-202ENST00000549580 UBR4Q5T4S7 5183 aa-0.83□□□□□ -2.54
SNRPF-202ENST00000549580 RANBP2P49792 3224 aaKnown RBP-0.83□□□□□ -2.54
SNRPF-202ENST00000549580 ERICH3Q5RHP9 1530 aa-0.83□□□□□ -2.54
SNRPF-202ENST00000549580 TLN2Q9Y4G6 2542 aa-0.83□□□□□ -2.54
SNRPF-202ENST00000549580 WFDC10BQ8IUB3 73 aa-0.83□□□□□ -2.54
SNRPF-202ENST00000549580 TRIOO75962 3097 aa-0.84□□□□□ -2.54
SNRPF-202ENST00000549580 KIF21BO75037 1637 aa-0.85□□□□□ -2.55
SNRPF-202ENST00000549580 SMR3BP02814 79 aaPredicted RBP-0.85□□□□□ -2.55
SNRPF-202ENST00000549580 DNAH2Q9P225 4427 aa-0.86□□□□□ -2.55
SNRPF-202ENST00000549580 PREX2Q70Z35 1606 aa-0.87□□□□□ -2.55
SNRPF-202ENST00000549580 AGLP35573 1532 aa-0.88□□□□□ -2.55
SNRPF-202ENST00000549580 HYDINQ4G0P3 5121 aa-0.88□□□□□ -2.55
SNRPF-202ENST00000549580 DNAH1Q9P2D7 4330 aa-0.89□□□□□ -2.55
SNRPF-202ENST00000549580 PLNP26678 52 aa-0.89□□□□□ -2.55
SNRPF-202ENST00000549580 RNF213Q63HN8 5207 aa-0.89□□□□□ -2.55
SNRPF-202ENST00000549580 A0A0C4DFX4 3053 aa-0.9□□□□□ -2.55
SNRPF-202ENST00000549580 USP9XQ93008 2570 aaPredicted RBP-0.9□□□□□ -2.55
SNRPF-202ENST00000549580 LMO7Q8WWI1 1683 aa-0.9□□□□□ -2.55
SNRPF-202ENST00000549580 EPPK1P58107 5090 aaKnown RBP-0.91□□□□□ -2.56
SNRPF-202ENST00000549580 ABCA5Q8WWZ7 1642 aa-0.93□□□□□ -2.56
SNRPF-202ENST00000549580 ADCY10Q96PN6 1610 aa-0.93□□□□□ -2.56
SNRPF-202ENST00000549580 SYCP2Q9BX26 1530 aa-0.93□□□□□ -2.56
SNRPF-202ENST00000549580 DNAH8Q96JB1 4490 aa-0.93□□□□□ -2.56
SNRPF-202ENST00000549580 COL6A5A8TX70 2615 aa-0.94□□□□□ -2.56
SNRPF-202ENST00000549580 MROH2AA6NES4 1674 aa-0.94□□□□□ -2.56
SNRPF-202ENST00000549580 SPENQ96T58 3664 aaKnown RBP-0.95□□□□□ -2.56
SNRPF-202ENST00000549580 DEFB131AP59861 70 aa-0.96□□□□□ -2.56
SNRPF-202ENST00000549580 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.97□□□□□ -2.56
SNRPF-202ENST00000549580 SPART-AS1P0CW21 52 aa-0.97□□□□□ -2.56
SNRPF-202ENST00000549580 COL12A1Q99715 3063 aa-0.97□□□□□ -2.56
SNRPF-202ENST00000549580 RYR2Q92736 4967 aa-0.98□□□□□ -2.57
SNRPF-202ENST00000549580 LINC01546A6NGU7 62 aa-0.98□□□□□ -2.57
SNRPF-202ENST00000549580 TFF3Q07654 80 aa-0.98□□□□□ -2.57
SNRPF-202ENST00000549580 CELSR3Q9NYQ7 3312 aa-0.99□□□□□ -2.57
SNRPF-202ENST00000549580 CMC2Q9NRP2 79 aa-0.99□□□□□ -2.57
SNRPF-202ENST00000549580 ABCC8Q09428 1581 aa-1□□□□□ -2.57
SNRPF-202ENST00000549580 RELNP78509 3460 aa-1□□□□□ -2.57
SNRPF-202ENST00000549580 ITPR1Q14643 2758 aa-1□□□□□ -2.57
SNRPF-202ENST00000549580 NRXN3Q9Y4C0 1643 aa-1.02□□□□□ -2.57
SNRPF-202ENST00000549580 PLECQ15149 4684 aaKnown RBP-1.03□□□□□ -2.57
SNRPF-202ENST00000549580 SMIM2Q9BVW6 85 aa-1.03□□□□□ -2.57
SNRPF-202ENST00000549580 MT1EP04732 61 aa-1.04□□□□□ -2.58
SNRPF-202ENST00000549580 MT1XP80297 61 aa-1.04□□□□□ -2.58
SNRPF-202ENST00000549580 FRYQ5TBA9 3013 aa-1.04□□□□□ -2.58
SNRPF-202ENST00000549580 DDX60Q8IY21 1712 aaKnown RBP-1.04□□□□□ -2.58
SNRPF-202ENST00000549580 SPTBN5Q9NRC6 3674 aaKnown RBP-1.05□□□□□ -2.58
SNRPF-202ENST00000549580 C5orf42Q9H799 3197 aa-1.05□□□□□ -2.58
SNRPF-202ENST00000549580 TEX15Q9BXT5 2789 aa-1.05□□□□□ -2.58
SNRPF-202ENST00000549580 SPTAN1Q13813 2472 aaKnown RBP-1.06□□□□□ -2.58
SNRPF-202ENST00000549580 FANCD2Q9BXW9 1451 aa-1.06□□□□□ -2.58
SNRPF-202ENST00000549580 IQGAP1P46940 1657 aa-1.07□□□□□ -2.58
SNRPF-202ENST00000549580 LAMA3Q16787 3333 aa-1.07□□□□□ -2.58
SNRPF-202ENST00000549580 POLR2KP53803 58 aaKnown RBP-1.08□□□□□ -2.58
SNRPF-202ENST00000549580 ABCA13Q86UQ4 5058 aa-1.08□□□□□ -2.58
SNRPF-202ENST00000549580 LAMA2P24043 3122 aaKnown RBP-1.11□□□□□ -2.59
SNRPF-202ENST00000549580 MT1LQ93083 61 aa-1.11□□□□□ -2.59
SNRPF-202ENST00000549580 BIRC6Q9NR09 4857 aa-1.11□□□□□ -2.59
SNRPF-202ENST00000549580 DNAH7Q8WXX0 4024 aa-1.12□□□□□ -2.59
SNRPF-202ENST00000549580 CMYA5Q8N3K9 4069 aa-1.13□□□□□ -2.59
SNRPF-202ENST00000549580 TRPM2O94759 1503 aa-1.15□□□□□ -2.59
SNRPF-202ENST00000549580 NIPBLQ6KC79 2804 aaeCLIP-1.15□□□□□ -2.59
SNRPF-202ENST00000549580 CLTCL1P53675 1640 aa-1.17□□□□□ -2.6
SNRPF-202ENST00000549580 SRCAPQ6ZRS2 3230 aa-1.17□□□□□ -2.6
SNRPF-202ENST00000549580 NFAT5O94916 1531 aa-1.17□□□□□ -2.6
SNRPF-202ENST00000549580 MYO9AB2RTY4 2548 aa-1.18□□□□□ -2.6
SNRPF-202ENST00000549580 LRBAP50851 2863 aa-1.18□□□□□ -2.6
SNRPF-202ENST00000549580 ADGRG4Q8IZF6 3080 aa-1.19□□□□□ -2.6
SNRPF-202ENST00000549580 DNHD1Q96M86 4753 aa-1.19□□□□□ -2.6
SNRPF-202ENST00000549580 SNRPGP15A8MWD9 76 aa-1.2□□□□□ -2.6
SNRPF-202ENST00000549580 DYNC1H1Q14204 4646 aaKnown RBP-1.2□□□□□ -2.6
SNRPF-202ENST00000549580 MGAQ8IWI9 3026 aa-1.21□□□□□ -2.6
SNRPF-202ENST00000549580 CHD7Q9P2D1 2997 aa-1.22□□□□□ -2.6
SNRPF-202ENST00000549580 DNAH17Q9UFH2 4485 aa-1.23□□□□□ -2.61
SNRPF-202ENST00000549580 CSMD1Q96PZ7 3565 aa-1.23□□□□□ -2.61
SNRPF-202ENST00000549580 NDUFA1O15239 70 aa-1.23□□□□□ -2.61
SNRPF-202ENST00000549580 DNAH10Q8IVF4 4471 aa-1.24□□□□□ -2.61
SNRPF-202ENST00000549580 LEAP2Q969E1 77 aa-1.24□□□□□ -2.61
SNRPF-202ENST00000549580 MT1HL1P0DM35 61 aa-1.27□□□□□ -2.61
SNRPF-202ENST00000549580 KRTAP20-1Q3LI63 56 aa-1.3□□□□□ -2.62
SNRPF-202ENST00000549580 TRRAPQ9Y4A5 3859 aa-1.31□□□□□ -2.62
SNRPF-202ENST00000549580 CFAP46Q8IYW2 2715 aa-1.31□□□□□ -2.62
SNRPF-202ENST00000549580 MT1GP13640 62 aa-1.33□□□□□ -2.62
SNRPF-202ENST00000549580 DEFB136Q30KP8 78 aa-1.34□□□□□ -2.62
SNRPF-202ENST00000549580 DEFB4AO15263 64 aa-1.37□□□□□ -2.63
SNRPF-202ENST00000549580 ZFHX4Q86UP3 3567 aa-1.37□□□□□ -2.63
SNRPF-202ENST00000549580 CEP295Q9C0D2 2601 aa-1.38□□□□□ -2.63
SNRPF-202ENST00000549580 EYSQ5T1H1 3165 aa-1.39□□□□□ -2.63
SNRPF-202ENST00000549580 MT1MQ8N339 61 aa-1.4□□□□□ -2.63
SNRPF-202ENST00000549580 MT2AP02795 61 aa-1.41□□□□□ -2.64
SNRPF-202ENST00000549580 IQGAP2Q13576 1575 aa-1.42□□□□□ -2.64
SNRPF-202ENST00000549580 DNAH5Q8TE73 4624 aa-1.46□□□□□ -2.64
SNRPF-202ENST00000549580 CRYBG3Q68DQ2 2970 aa-1.46□□□□□ -2.64
SNRPF-202ENST00000549580 TLN1Q9Y490 2541 aaKnown RBP-1.46□□□□□ -2.64
SNRPF-202ENST00000549580 TOMM5Q8N4H5 51 aa-1.46□□□□□ -2.64
SNRPF-202ENST00000549580 ITPR2Q14571 2701 aa-1.47□□□□□ -2.65
SNRPF-202ENST00000549580 TOMM7Q9P0U1 55 aa-1.5□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 182.7 ms