RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 HIST1H4AP62805 103 aaKnown RBP8.35□□□□□ -1.07
CHMP1A-207ENST00000549328 ATOX1O00244 68 aa8.33□□□□□ -1.08
CHMP1A-207ENST00000549328 A0A087WVE0 104 aa8.31□□□□□ -1.08
CHMP1A-207ENST00000549328 A6NN06 94 aa8.31□□□□□ -1.08
CHMP1A-207ENST00000549328 H0Y9P7 68 aa8.29□□□□□ -1.08
CHMP1A-207ENST00000549328 CRIPTQ9P021 101 aa8.28□□□□□ -1.08
CHMP1A-207ENST00000549328 LINC00643Q86TS7 51 aa8.26□□□□□ -1.09
CHMP1A-207ENST00000549328 IMUPQ9GZP8 106 aa8.26□□□□□ -1.09
CHMP1A-207ENST00000549328 NDUFC1O43677 76 aa8.23□□□□□ -1.09
CHMP1A-207ENST00000549328 A8MUN3 132 aa8.21□□□□□ -1.1
CHMP1A-207ENST00000549328 KRTAP10-5P60370 271 aa8.21□□□□□ -1.1
CHMP1A-207ENST00000549328 H0YAA0 97 aa8.2□□□□□ -1.1
CHMP1A-207ENST00000549328 LINC00208Q96KT6 92 aa8.16□□□□□ -1.1
CHMP1A-207ENST00000549328 OCR1Q9BZK8 76 aa8.13□□□□□ -1.11
CHMP1A-207ENST00000549328 MP68P56378 58 aa8.12□□□□□ -1.11
CHMP1A-207ENST00000549328 A0A1B0GV90 55 aa8.07□□□□□ -1.12
CHMP1A-207ENST00000549328 ADM2Q7Z4H4 148 aa8.06□□□□□ -1.12
CHMP1A-207ENST00000549328 H3BPC8 53 aa8.02□□□□□ -1.13
CHMP1A-207ENST00000549328 J3QR89 54 aa8□□□□□ -1.13
CHMP1A-207ENST00000549328 KRTAP5-9P26371 169 aa7.96□□□□□ -1.14
CHMP1A-207ENST00000549328 SCGB1A1P11684 91 aa7.93□□□□□ -1.14
CHMP1A-207ENST00000549328 DMAC1Q96GE9 116 aa7.93□□□□□ -1.14
CHMP1A-207ENST00000549328 C20orf197Q8N268 126 aa7.91□□□□□ -1.14
CHMP1A-207ENST00000549328 PRO2289Q9P1D8 64 aa7.9□□□□□ -1.14
CHMP1A-207ENST00000549328 NEBP20929 6669 aa7.89□□□□□ -1.15
CHMP1A-207ENST00000549328 R4GN34 69 aa7.88□□□□□ -1.15
CHMP1A-207ENST00000549328 MUC12Q9UKN1 5478 aa7.88□□□□□ -1.15
CHMP1A-207ENST00000549328 PLAC4Q8WY50 150 aa7.87□□□□□ -1.15
CHMP1A-207ENST00000549328 P0C880 135 aa7.86□□□□□ -1.15
CHMP1A-207ENST00000549328 MT1XP80297 61 aa7.83□□□□□ -1.16
CHMP1A-207ENST00000549328 M0QZ58 72 aa7.8□□□□□ -1.16
CHMP1A-207ENST00000549328 KRTAP3-2Q9BYR7 98 aa7.8□□□□□ -1.16
CHMP1A-207ENST00000549328 TRAV7A0A075B6U4 112 aa7.78□□□□□ -1.16
CHMP1A-207ENST00000549328 KMT2DO14686 5537 aa7.77□□□□□ -1.17
CHMP1A-207ENST00000549328 ACYP2P14621 99 aa7.74□□□□□ -1.17
CHMP1A-207ENST00000549328 KRTAP20-1Q3LI63 56 aa7.74□□□□□ -1.17
CHMP1A-207ENST00000549328 SMIM20Q8N5G0 67 aa7.73□□□□□ -1.17
CHMP1A-207ENST00000549328 KRTAP12-2P59991 146 aa7.69□□□□□ -1.18
CHMP1A-207ENST00000549328 MT-ATP8P03928 68 aa7.68□□□□□ -1.18
CHMP1A-207ENST00000549328 LINC01554Q52M75 96 aa7.67□□□□□ -1.18
CHMP1A-207ENST00000549328 SPTSSBQ8NFR3 76 aa7.67□□□□□ -1.18
CHMP1A-207ENST00000549328 SPRR2FQ96RM1 72 aa7.67□□□□□ -1.18
CHMP1A-207ENST00000549328 MDN1Q9NU22 5596 aa7.65□□□□□ -1.18
CHMP1A-207ENST00000549328 K7ERU9 68 aa7.65□□□□□ -1.18
CHMP1A-207ENST00000549328 KRTAP8-1Q8IUC2 63 aa7.63□□□□□ -1.19
CHMP1A-207ENST00000549328 CHKB-CPT1BH3BT56 60 aa7.56□□□□□ -1.2
CHMP1A-207ENST00000549328 KRTAP2-3P0C7H8 128 aa7.56□□□□□ -1.2
CHMP1A-207ENST00000549328 SPRR2EP22531 72 aa7.56□□□□□ -1.2
CHMP1A-207ENST00000549328 SPRR2BP35325 72 aa7.56□□□□□ -1.2
CHMP1A-207ENST00000549328 SPRR2AP35326 72 aa7.56□□□□□ -1.2
CHMP1A-207ENST00000549328 KRTAP2-4Q9BYR9 128 aa7.56□□□□□ -1.2
CHMP1A-207ENST00000549328 SNURFQ9Y675 71 aa7.52□□□□□ -1.21
CHMP1A-207ENST00000549328 KRTAP4-8A0A0G2JLE6 195 aa7.51□□□□□ -1.21
CHMP1A-207ENST00000549328 KRTAP4-8Q9BYQ9 185 aa7.51□□□□□ -1.21
CHMP1A-207ENST00000549328 SPANXA2-OT1Q8N9U9 137 aa7.49□□□□□ -1.21
CHMP1A-207ENST00000549328 LCE1AQ5T7P2 110 aa7.48□□□□□ -1.21
CHMP1A-207ENST00000549328 KRTAP10-7P60409 375 aaPredicted RBP7.46□□□□□ -1.22
CHMP1A-207ENST00000549328 KRTAP10-12P60413 245 aa7.46□□□□□ -1.22
CHMP1A-207ENST00000549328 SERP2Q8N6R1 65 aa7.41□□□□□ -1.22
CHMP1A-207ENST00000549328 SPRR2DP22532 72 aa7.32□□□□□ -1.24
CHMP1A-207ENST00000549328 KRTAP13-4Q3LI77 160 aa7.31□□□□□ -1.24
CHMP1A-207ENST00000549328 KRTAP2-2Q9BYT5 123 aa7.31□□□□□ -1.24
CHMP1A-207ENST00000549328 KRTAP2-1Q9BYU5 128 aa7.31□□□□□ -1.24
CHMP1A-207ENST00000549328 COA5Q86WW8 74 aa7.25□□□□□ -1.25
CHMP1A-207ENST00000549328 CAMK2N1Q7Z7J9 78 aa7.23□□□□□ -1.25
CHMP1A-207ENST00000549328 SEC61GP60059 68 aa7.18□□□□□ -1.26
CHMP1A-207ENST00000549328 SERP1Q9Y6X1 66 aa7.17□□□□□ -1.26
CHMP1A-207ENST00000549328 COX7CP15954 63 aa7.15□□□□□ -1.26
CHMP1A-207ENST00000549328 LCE3BQ5TA77 95 aa7.13□□□□□ -1.27
CHMP1A-207ENST00000549328 A0A0D9SG42 100 aa7.07□□□□□ -1.28
CHMP1A-207ENST00000549328 H7BZZ5 65 aa7.06□□□□□ -1.28
CHMP1A-207ENST00000549328 A0A1B0GU33 70 aa7.05□□□□□ -1.28
CHMP1A-207ENST00000549328 SPATA8Q6RVD6 105 aa7.04□□□□□ -1.28
CHMP1A-207ENST00000549328 KRTAP19-7Q3SYF9 63 aa7.01□□□□□ -1.29
CHMP1A-207ENST00000549328 CYSTM1Q9H1C7 97 aa7.01□□□□□ -1.29
CHMP1A-207ENST00000549328 SPINT4Q6UDR6 99 aa6.99□□□□□ -1.29
CHMP1A-207ENST00000549328 MT1EP04732 61 aa6.95□□□□□ -1.3
CHMP1A-207ENST00000549328 KRTAP12-1P59990 96 aa6.95□□□□□ -1.3
CHMP1A-207ENST00000549328 LCE5AQ5TCM9 118 aa6.95□□□□□ -1.3
CHMP1A-207ENST00000549328 KRTAP19-3Q7Z4W3 81 aa6.91□□□□□ -1.3
CHMP1A-207ENST00000549328 A0A1B0GU69 56 aa6.89□□□□□ -1.31
CHMP1A-207ENST00000549328 SMIM26A0A096LP01 95 aa6.87□□□□□ -1.31
CHMP1A-207ENST00000549328 ANAPC13Q9BS18 74 aa6.83□□□□□ -1.32
CHMP1A-207ENST00000549328 KRTAP19-5Q3LI72 72 aa6.8□□□□□ -1.32
CHMP1A-207ENST00000549328 DSTQ03001 7570 aaKnown RBP6.79□□□□□ -1.32
CHMP1A-207ENST00000549328 MT1GP13640 62 aa6.77□□□□□ -1.33
CHMP1A-207ENST00000549328 A8MU10 97 aa6.76□□□□□ -1.33
CHMP1A-207ENST00000549328 PP632Q6XCG6 107 aa6.71□□□□□ -1.34
CHMP1A-207ENST00000549328 CCDC179H3BU77 68 aa6.68□□□□□ -1.34
CHMP1A-207ENST00000549328 ATP5EP56381 51 aaPredicted RBP6.68□□□□□ -1.34
CHMP1A-207ENST00000549328 PRR15LQ9BU68 103 aa6.68□□□□□ -1.34
CHMP1A-207ENST00000549328 TNP1P09430 55 aa6.67□□□□□ -1.34
CHMP1A-207ENST00000549328 C10orf95Q9H7T3 257 aa6.66□□□□□ -1.34
CHMP1A-207ENST00000549328 MT1LQ93083 61 aa6.63□□□□□ -1.35
CHMP1A-207ENST00000549328 KRTAP4-9Q9BYQ8 210 aa6.62□□□□□ -1.35
CHMP1A-207ENST00000549328 LCE3AQ5TA76 89 aa6.61□□□□□ -1.35
CHMP1A-207ENST00000549328 MT1MQ8N339 61 aa6.61□□□□□ -1.35
CHMP1A-207ENST00000549328 LINC01558Q9Y6Z2 57 aa6.59□□□□□ -1.35
CHMP1A-207ENST00000549328 LCE4AQ5TA78 99 aa6.5□□□□□ -1.37
CHMP1A-207ENST00000549328 LCE1DQ5T752 114 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms