RNA–Protein interactions for RNA: ENST00000548316.1

PDZRN4-204, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best)

Gene PDZRN4, Length 2,971 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-204ENST00000548316 LCE1DQ5T752 114 aa3.86□□□□□ -1.79
PDZRN4-204ENST00000548316 C7orf65Q6ZTY9 151 aa3.86□□□□□ -1.79
PDZRN4-204ENST00000548316 A0A1B0GU69 56 aa3.84□□□□□ -1.79
PDZRN4-204ENST00000548316 KRTAP4-12Q9BQ66 201 aa3.83□□□□□ -1.8
PDZRN4-204ENST00000548316 LRP1Q07954 4544 aaKnown RBP3.83□□□□□ -1.8
PDZRN4-204ENST00000548316 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
PDZRN4-204ENST00000548316 Q8N1X5 172 aa3.81□□□□□ -1.8
PDZRN4-204ENST00000548316 SMR3BP02814 79 aaPredicted RBP3.8□□□□□ -1.8
PDZRN4-204ENST00000548316 RBM12B-AS1Q9P1G2 102 aa3.8□□□□□ -1.8
PDZRN4-204ENST00000548316 MIR22HGQ0VDD5 57 aa3.79□□□□□ -1.8
PDZRN4-204ENST00000548316 H3BS24 57 aa3.79□□□□□ -1.8
PDZRN4-204ENST00000548316 UQCR11O14957 56 aa3.79□□□□□ -1.8
PDZRN4-204ENST00000548316 FLG2Q5D862 2391 aaPredicted RBP3.77□□□□□ -1.81
PDZRN4-204ENST00000548316 C9orf92A6NGG3 77 aa3.77□□□□□ -1.81
PDZRN4-204ENST00000548316 KRTAP10-8P60410 259 aa3.77□□□□□ -1.81
PDZRN4-204ENST00000548316 LCE2BO14633 110 aa3.75□□□□□ -1.81
PDZRN4-204ENST00000548316 RYR1P21817 5038 aa3.75□□□□□ -1.81
PDZRN4-204ENST00000548316 KMT2CQ8NEZ4 4911 aaKnown RBP3.75□□□□□ -1.81
PDZRN4-204ENST00000548316 H0YAA0 97 aa3.75□□□□□ -1.81
PDZRN4-204ENST00000548316 COX6B2Q6YFQ2 88 aa3.73□□□□□ -1.81
PDZRN4-204ENST00000548316 ADM2Q7Z4H4 148 aa3.73□□□□□ -1.81
PDZRN4-204ENST00000548316 LCE2AQ5TA79 106 aaPredicted RBP3.72□□□□□ -1.81
PDZRN4-204ENST00000548316 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
PDZRN4-204ENST00000548316 H1FX-AS1Q4G0G2 97 aa3.7□□□□□ -1.82
PDZRN4-204ENST00000548316 MYCBP2O75592 4640 aa3.69□□□□□ -1.82
PDZRN4-204ENST00000548316 LCE2CQ5TA81 110 aa3.69□□□□□ -1.82
PDZRN4-204ENST00000548316 RPL37P61927 97 aaKnown RBP3.69□□□□□ -1.82
PDZRN4-204ENST00000548316 RYR3Q15413 4870 aa3.68□□□□□ -1.82
PDZRN4-204ENST00000548316 KRTAP10-6P60371 365 aaPredicted RBP3.66□□□□□ -1.82
PDZRN4-204ENST00000548316 A0A1B0GU33 70 aa3.66□□□□□ -1.82
PDZRN4-204ENST00000548316 MT1HL1P0DM35 61 aa3.66□□□□□ -1.82
PDZRN4-204ENST00000548316 DMBT1Q9UGM3 2413 aaPredicted RBP3.65□□□□□ -1.82
PDZRN4-204ENST00000548316 Q5VSD8 79 aa3.63□□□□□ -1.83
PDZRN4-204ENST00000548316 KRTAP4-5Q9BYR2 181 aa3.63□□□□□ -1.83
PDZRN4-204ENST00000548316 KRTAP13-4Q3LI77 160 aa3.6□□□□□ -1.83
PDZRN4-204ENST00000548316 CSAG1Q6PB30 78 aa3.6□□□□□ -1.83
PDZRN4-204ENST00000548316 LINC01554Q52M75 96 aa3.58□□□□□ -1.84
PDZRN4-204ENST00000548316 S4R3F8 94 aa3.56□□□□□ -1.84
PDZRN4-204ENST00000548316 KIAA1109Q2LD37 5005 aa3.56□□□□□ -1.84
PDZRN4-204ENST00000548316 MUC17Q685J3 4493 aa3.55□□□□□ -1.84
PDZRN4-204ENST00000548316 LPAP08519 4548 aa3.55□□□□□ -1.84
PDZRN4-204ENST00000548316 KRTAP25-1Q3LHN0 102 aa3.55□□□□□ -1.84
PDZRN4-204ENST00000548316 LORP23490 312 aaPredicted RBP3.54□□□□□ -1.84
PDZRN4-204ENST00000548316 LRP2P98164 4655 aa3.53□□□□□ -1.84
PDZRN4-204ENST00000548316 P0C880 135 aa3.53□□□□□ -1.84
PDZRN4-204ENST00000548316 TPRXLQ17RH7 258 aa3.53□□□□□ -1.84
PDZRN4-204ENST00000548316 KRTAP4-11Q9BYQ6 195 aa3.53□□□□□ -1.84
PDZRN4-204ENST00000548316 EPPK1P58107 5090 aaKnown RBP3.51□□□□□ -1.85
PDZRN4-204ENST00000548316 ROMO1P60602 79 aa3.48□□□□□ -1.85
PDZRN4-204ENST00000548316 KRTAP12-1P59990 96 aa3.46□□□□□ -1.86
PDZRN4-204ENST00000548316 KRTAP12-2P59991 146 aa3.45□□□□□ -1.86
PDZRN4-204ENST00000548316 KRTAP19-2Q3LHN2 52 aa3.45□□□□□ -1.86
PDZRN4-204ENST00000548316 K7ERS5 55 aa3.45□□□□□ -1.86
PDZRN4-204ENST00000548316 ABCA13Q86UQ4 5058 aa3.43□□□□□ -1.86
PDZRN4-204ENST00000548316 A0A0D9SG42 100 aa3.43□□□□□ -1.86
PDZRN4-204ENST00000548316 CRIPTQ9P021 101 aa3.43□□□□□ -1.86
PDZRN4-204ENST00000548316 KRTAP4-1Q9BYQ7 146 aa3.41□□□□□ -1.86
PDZRN4-204ENST00000548316 M0QZ58 72 aa3.4□□□□□ -1.86
PDZRN4-204ENST00000548316 HERC1Q15751 4861 aa3.39□□□□□ -1.87
PDZRN4-204ENST00000548316 KRTAP19-1Q8IUB9 90 aa3.37□□□□□ -1.87
PDZRN4-204ENST00000548316 HERC2O95714 4834 aa3.37□□□□□ -1.87
PDZRN4-204ENST00000548316 BIRC6Q9NR09 4857 aa3.37□□□□□ -1.87
PDZRN4-204ENST00000548316 C10orf95Q9H7T3 257 aa3.34□□□□□ -1.87
PDZRN4-204ENST00000548316 FLGP20930 4061 aaPredicted RBP3.34□□□□□ -1.88
PDZRN4-204ENST00000548316 SEC61BP60468 96 aaKnown RBP3.32□□□□□ -1.88
PDZRN4-204ENST00000548316 SPINT4Q6UDR6 99 aa3.3□□□□□ -1.88
PDZRN4-204ENST00000548316 A0A0A0MQY5 61 aa3.3□□□□□ -1.88
PDZRN4-204ENST00000548316 KRTAP15-1Q3LI76 137 aa3.3□□□□□ -1.88
PDZRN4-204ENST00000548316 R4GN34 69 aa3.23□□□□□ -1.89
PDZRN4-204ENST00000548316 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.9
PDZRN4-204ENST00000548316 HMCN2Q8NDA2 5059 aa3.2□□□□□ -1.9
PDZRN4-204ENST00000548316 KRTAP23-1A1A580 65 aa3.19□□□□□ -1.9
PDZRN4-204ENST00000548316 MUC2Q02817 5179 aa3.17□□□□□ -1.9
PDZRN4-204ENST00000548316 NDUFAF8A1L188 74 aa3.15□□□□□ -1.91
PDZRN4-204ENST00000548316 PCLOQ9Y6V0 5065 aa3.12□□□□□ -1.91
PDZRN4-204ENST00000548316 SPRR2GQ9BYE4 73 aa3.09□□□□□ -1.91
PDZRN4-204ENST00000548316 PP632Q6XCG6 107 aa3.09□□□□□ -1.91
PDZRN4-204ENST00000548316 CAMK2N1Q7Z7J9 78 aa3.06□□□□□ -1.92
PDZRN4-204ENST00000548316 PLAC4Q8WY50 150 aa3.06□□□□□ -1.92
PDZRN4-204ENST00000548316 MT1HP80294 61 aa3.04□□□□□ -1.92
PDZRN4-204ENST00000548316 SPRR5A0A1B0GTR4 108 aa3.02□□□□□ -1.93
PDZRN4-204ENST00000548316 FAT4Q6V0I7 4981 aa3.02□□□□□ -1.93
PDZRN4-204ENST00000548316 RNF213Q63HN8 5207 aa3□□□□□ -1.93
PDZRN4-204ENST00000548316 MT2AP02795 61 aa3□□□□□ -1.93
PDZRN4-204ENST00000548316 MT1FP04733 61 aa3□□□□□ -1.93
PDZRN4-204ENST00000548316 KRTAP19-8Q3LI54 63 aa3□□□□□ -1.93
PDZRN4-204ENST00000548316 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
PDZRN4-204ENST00000548316 TNP1P09430 55 aa2.98□□□□□ -1.93
PDZRN4-204ENST00000548316 LCE5AQ5TCM9 118 aa2.97□□□□□ -1.93
PDZRN4-204ENST00000548316 UBR4Q5T4S7 5183 aa2.94□□□□□ -1.94
PDZRN4-204ENST00000548316 MT1BP07438 61 aa2.94□□□□□ -1.94
PDZRN4-204ENST00000548316 M0R2T5 61 aa2.93□□□□□ -1.94
PDZRN4-204ENST00000548316 KRTAP10-5P60370 271 aa2.9□□□□□ -1.94
PDZRN4-204ENST00000548316 MT1XP80297 61 aa2.9□□□□□ -1.94
PDZRN4-204ENST00000548316 MUC5BQ9HC84 5762 aaPredicted RBP2.9□□□□□ -1.95
PDZRN4-204ENST00000548316 LUZP6Q538Z0 58 aa2.89□□□□□ -1.95
PDZRN4-204ENST00000548316 LCE3AQ5TA76 89 aa2.89□□□□□ -1.95
PDZRN4-204ENST00000548316 KRTAP9-3Q9BYQ3 159 aa2.89□□□□□ -1.95
PDZRN4-204ENST00000548316 KRTAP8-1Q8IUC2 63 aa2.88□□□□□ -1.95
PDZRN4-204ENST00000548316 KRTAP10-10P60014 251 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms