RNA–Protein interactions for RNA: ENST00000547701.5

CTDSP2-203, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 988 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-203ENST00000547701 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.59□□□□□ -0.71
CTDSP2-203ENST00000547701 FAM236AA0A1B0GUQ0 79 aa10.58□□□□□ -0.72
CTDSP2-203ENST00000547701 FAM236BA0A1B0GV22 79 aa10.58□□□□□ -0.72
CTDSP2-203ENST00000547701 KLKP1Q107X0 134 aa10.58□□□□□ -0.72
CTDSP2-203ENST00000547701 SPRR2GQ9BYE4 73 aa10.57□□□□□ -0.72
CTDSP2-203ENST00000547701 K7ERU9 68 aa10.53□□□□□ -0.72
CTDSP2-203ENST00000547701 H0YAA0 97 aa10.52□□□□□ -0.73
CTDSP2-203ENST00000547701 NDUFC1O43677 76 aa10.51□□□□□ -0.73
CTDSP2-203ENST00000547701 SCGB1A1P11684 91 aa10.5□□□□□ -0.73
CTDSP2-203ENST00000547701 KRTAP19-8Q3LI54 63 aa10.48□□□□□ -0.73
CTDSP2-203ENST00000547701 CRIPTQ9P021 101 aa10.48□□□□□ -0.73
CTDSP2-203ENST00000547701 MT-ATP8P03928 68 aa10.42□□□□□ -0.74
CTDSP2-203ENST00000547701 KRTAP9-7A8MTY7 169 aa10.4□□□□□ -0.74
CTDSP2-203ENST00000547701 MT1BP07438 61 aa10.4□□□□□ -0.74
CTDSP2-203ENST00000547701 SMIM20Q8N5G0 67 aa10.4□□□□□ -0.74
CTDSP2-203ENST00000547701 DMAC1Q96GE9 116 aa10.38□□□□□ -0.75
CTDSP2-203ENST00000547701 Q5VV11 94 aa10.37□□□□□ -0.75
CTDSP2-203ENST00000547701 TRAV7A0A075B6U4 112 aa10.33□□□□□ -0.76
CTDSP2-203ENST00000547701 MACF1Q9UPN3 7388 aaKnown RBP10.28□□□□□ -0.76
CTDSP2-203ENST00000547701 ADM2Q7Z4H4 148 aa10.21□□□□□ -0.77
CTDSP2-203ENST00000547701 A6NN06 94 aa10.15□□□□□ -0.78
CTDSP2-203ENST00000547701 KRTAP10-5P60370 271 aa10.15□□□□□ -0.78
CTDSP2-203ENST00000547701 ACYP2P14621 99 aa10.14□□□□□ -0.79
CTDSP2-203ENST00000547701 C20orf197Q8N268 126 aa10.1□□□□□ -0.79
CTDSP2-203ENST00000547701 SYNE2Q8WXH0 6885 aaKnown RBP10.04□□□□□ -0.8
CTDSP2-203ENST00000547701 SERP2Q8N6R1 65 aa10.04□□□□□ -0.8
CTDSP2-203ENST00000547701 KRTAP3-2Q9BYR7 98 aa10.04□□□□□ -0.8
CTDSP2-203ENST00000547701 P0C880 135 aa10.03□□□□□ -0.8
CTDSP2-203ENST00000547701 KRTAP6-3Q3LI67 103 aa10.03□□□□□ -0.8
CTDSP2-203ENST00000547701 SPANXA2-OT1Q8N9U9 137 aa10.02□□□□□ -0.81
CTDSP2-203ENST00000547701 SNURFQ9Y675 71 aa9.99□□□□□ -0.81
CTDSP2-203ENST00000547701 SPTSSBQ8NFR3 76 aa9.98□□□□□ -0.81
CTDSP2-203ENST00000547701 R4GN34 69 aa9.98□□□□□ -0.81
CTDSP2-203ENST00000547701 M0QZ58 72 aa9.86□□□□□ -0.83
CTDSP2-203ENST00000547701 CHKB-CPT1BH3BT56 60 aa9.84□□□□□ -0.83
CTDSP2-203ENST00000547701 PLAC4Q8WY50 150 aa9.84□□□□□ -0.83
CTDSP2-203ENST00000547701 PRO2289Q9P1D8 64 aa9.82□□□□□ -0.84
CTDSP2-203ENST00000547701 MT1XP80297 61 aa9.79□□□□□ -0.84
CTDSP2-203ENST00000547701 COX7CP15954 63 aa9.77□□□□□ -0.85
CTDSP2-203ENST00000547701 KRTAP5-9P26371 169 aa9.7□□□□□ -0.86
CTDSP2-203ENST00000547701 LINC01554Q52M75 96 aa9.63□□□□□ -0.87
CTDSP2-203ENST00000547701 KRTAP12-2P59991 146 aa9.61□□□□□ -0.87
CTDSP2-203ENST00000547701 COA5Q86WW8 74 aa9.61□□□□□ -0.87
CTDSP2-203ENST00000547701 H7BZZ5 65 aa9.6□□□□□ -0.87
CTDSP2-203ENST00000547701 CYSTM1Q9H1C7 97 aa9.52□□□□□ -0.89
CTDSP2-203ENST00000547701 MUC12Q9UKN1 5478 aa9.49□□□□□ -0.89
CTDSP2-203ENST00000547701 KRTAP13-4Q3LI77 160 aa9.44□□□□□ -0.9
CTDSP2-203ENST00000547701 NEBP20929 6669 aa9.44□□□□□ -0.9
CTDSP2-203ENST00000547701 KMT2DO14686 5537 aa9.42□□□□□ -0.9
CTDSP2-203ENST00000547701 ANAPC13Q9BS18 74 aa9.42□□□□□ -0.9
CTDSP2-203ENST00000547701 SEC61GP60059 68 aa9.39□□□□□ -0.91
CTDSP2-203ENST00000547701 SERP1Q9Y6X1 66 aa9.36□□□□□ -0.91
CTDSP2-203ENST00000547701 KRTAP10-12P60413 245 aa9.35□□□□□ -0.91
CTDSP2-203ENST00000547701 KRTAP8-1Q8IUC2 63 aa9.33□□□□□ -0.92
CTDSP2-203ENST00000547701 KRTAP10-7P60409 375 aaPredicted RBP9.29□□□□□ -0.92
CTDSP2-203ENST00000547701 SPRR2FQ96RM1 72 aa9.29□□□□□ -0.92
CTDSP2-203ENST00000547701 KRTAP4-8A0A0G2JLE6 195 aa9.24□□□□□ -0.93
CTDSP2-203ENST00000547701 KRTAP4-8Q9BYQ9 185 aa9.24□□□□□ -0.93
CTDSP2-203ENST00000547701 MDN1Q9NU22 5596 aa9.23□□□□□ -0.93
CTDSP2-203ENST00000547701 A0A1B0GU33 70 aa9.23□□□□□ -0.93
CTDSP2-203ENST00000547701 CCDC179H3BU77 68 aa9.22□□□□□ -0.93
CTDSP2-203ENST00000547701 ATP5EP56381 51 aaPredicted RBP9.2□□□□□ -0.94
CTDSP2-203ENST00000547701 CAMK2N1Q7Z7J9 78 aa9.14□□□□□ -0.95
CTDSP2-203ENST00000547701 SPATA8Q6RVD6 105 aa9.13□□□□□ -0.95
CTDSP2-203ENST00000547701 KRTAP20-1Q3LI63 56 aa9.12□□□□□ -0.95
CTDSP2-203ENST00000547701 A0A1B0GU69 56 aa9.11□□□□□ -0.95
CTDSP2-203ENST00000547701 SPRR2EP22531 72 aa9.1□□□□□ -0.95
CTDSP2-203ENST00000547701 SPRR2BP35325 72 aa9.1□□□□□ -0.95
CTDSP2-203ENST00000547701 SPRR2AP35326 72 aa9.1□□□□□ -0.95
CTDSP2-203ENST00000547701 LCE1AQ5T7P2 110 aa9.1□□□□□ -0.95
CTDSP2-203ENST00000547701 A0A0D9SG42 100 aa9.06□□□□□ -0.96
CTDSP2-203ENST00000547701 KRTAP12-1P59990 96 aa9.02□□□□□ -0.97
CTDSP2-203ENST00000547701 KRTAP2-3P0C7H8 128 aa9□□□□□ -0.97
CTDSP2-203ENST00000547701 KRTAP2-4Q9BYR9 128 aa9□□□□□ -0.97
CTDSP2-203ENST00000547701 SMIM26A0A096LP01 95 aa8.99□□□□□ -0.97
CTDSP2-203ENST00000547701 TMEM258P61165 79 aa8.98□□□□□ -0.97
CTDSP2-203ENST00000547701 SPINT4Q6UDR6 99 aa8.95□□□□□ -0.98
CTDSP2-203ENST00000547701 LINC01558Q9Y6Z2 57 aa8.92□□□□□ -0.98
CTDSP2-203ENST00000547701 PRR15LQ9BU68 103 aa8.91□□□□□ -0.98
CTDSP2-203ENST00000547701 A8MU10 97 aa8.81□□□□□ -1
CTDSP2-203ENST00000547701 SPRR2DP22532 72 aa8.8□□□□□ -1
CTDSP2-203ENST00000547701 KRTAP19-7Q3SYF9 63 aa8.77□□□□□ -1.01
CTDSP2-203ENST00000547701 KRTAP2-2Q9BYT5 123 aa8.73□□□□□ -1.01
CTDSP2-203ENST00000547701 KRTAP2-1Q9BYU5 128 aa8.73□□□□□ -1.01
CTDSP2-203ENST00000547701 MT1EP04732 61 aa8.67□□□□□ -1.02
CTDSP2-203ENST00000547701 UQCR11O14957 56 aa8.65□□□□□ -1.02
CTDSP2-203ENST00000547701 LCE5AQ5TCM9 118 aa8.61□□□□□ -1.03
CTDSP2-203ENST00000547701 C10orf95Q9H7T3 257 aa8.61□□□□□ -1.03
CTDSP2-203ENST00000547701 LCE3BQ5TA77 95 aa8.57□□□□□ -1.04
CTDSP2-203ENST00000547701 KRTAP19-3Q7Z4W3 81 aa8.57□□□□□ -1.04
CTDSP2-203ENST00000547701 TNP1P09430 55 aa8.56□□□□□ -1.04
CTDSP2-203ENST00000547701 KRTAP19-5Q3LI72 72 aa8.51□□□□□ -1.05
CTDSP2-203ENST00000547701 V9GYY9 64 aa8.51□□□□□ -1.05
CTDSP2-203ENST00000547701 Q1T7F1 81 aa8.45□□□□□ -1.06
CTDSP2-203ENST00000547701 MT1GP13640 62 aa8.44□□□□□ -1.06
CTDSP2-203ENST00000547701 MIR22HGQ0VDD5 57 aa8.42□□□□□ -1.06
CTDSP2-203ENST00000547701 LCE3AQ5TA76 89 aa8.4□□□□□ -1.06
CTDSP2-203ENST00000547701 DSTQ03001 7570 aaKnown RBP8.33□□□□□ -1.08
CTDSP2-203ENST00000547701 PP632Q6XCG6 107 aa8.32□□□□□ -1.08
CTDSP2-203ENST00000547701 MT1LQ93083 61 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms