RNA–Protein interactions for RNA: ENST00000547615.1

PTCH1-214, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 525 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-214ENST00000547615 CRIPTQ9P021 101 aa3.68□□□□□ -1.82
PTCH1-214ENST00000547615 KMT2DO14686 5537 aa3.68□□□□□ -1.82
PTCH1-214ENST00000547615 MDN1Q9NU22 5596 aa3.67□□□□□ -1.82
PTCH1-214ENST00000547615 IGKV2D-30A0A075B6S6 120 aa3.67□□□□□ -1.82
PTCH1-214ENST00000547615 hDV103S1A0JD37 113 aa3.67□□□□□ -1.82
PTCH1-214ENST00000547615 IGKV2-30P06310 120 aa3.67□□□□□ -1.82
PTCH1-214ENST00000547615 K7EQZ3 153 aa3.66□□□□□ -1.82
PTCH1-214ENST00000547615 KRTAP2-2Q9BYT5 123 aa3.66□□□□□ -1.82
PTCH1-214ENST00000547615 KRTAP2-1Q9BYU5 128 aa3.66□□□□□ -1.82
PTCH1-214ENST00000547615 MMP24-AS1A0A0U1RRL7 71 aa3.65□□□□□ -1.83
PTCH1-214ENST00000547615 ATOX1O00244 68 aa3.65□□□□□ -1.83
PTCH1-214ENST00000547615 TMEM258P61165 79 aa3.65□□□□□ -1.83
PTCH1-214ENST00000547615 KLKP1Q107X0 134 aa3.65□□□□□ -1.83
PTCH1-214ENST00000547615 S4R3F8 94 aa3.65□□□□□ -1.83
PTCH1-214ENST00000547615 LOC110117498A0A087WWA1 95 aa3.64□□□□□ -1.83
PTCH1-214ENST00000547615 SPRR2EP22531 72 aa3.64□□□□□ -1.83
PTCH1-214ENST00000547615 SPRR2BP35325 72 aa3.64□□□□□ -1.83
PTCH1-214ENST00000547615 SPRR2AP35326 72 aa3.64□□□□□ -1.83
PTCH1-214ENST00000547615 NREPQ16612 68 aa3.64□□□□□ -1.83
PTCH1-214ENST00000547615 PRO2289Q9P1D8 64 aa3.64□□□□□ -1.83
PTCH1-214ENST00000547615 BAALC-AS2P0C853 105 aa3.63□□□□□ -1.83
PTCH1-214ENST00000547615 SPRR2FQ96RM1 72 aa3.63□□□□□ -1.83
PTCH1-214ENST00000547615 KRTAP19-4Q3LI73 84 aa3.62□□□□□ -1.83
PTCH1-214ENST00000547615 SERP2Q8N6R1 65 aa3.62□□□□□ -1.83
PTCH1-214ENST00000547615 CXCL6P80162 114 aa3.61□□□□□ -1.83
PTCH1-214ENST00000547615 C4orf26Q17RF5 130 aa3.61□□□□□ -1.83
PTCH1-214ENST00000547615 KRTAP4-8Q9BYQ9 185 aa3.61□□□□□ -1.83
PTCH1-214ENST00000547615 ATP5EP2Q5VTU8 51 aa3.59□□□□□ -1.83
PTCH1-214ENST00000547615 Q5W150 140 aa3.57□□□□□ -1.84
PTCH1-214ENST00000547615 KRTAP4-12Q9BQ66 201 aa3.57□□□□□ -1.84
PTCH1-214ENST00000547615 LCA10Q71F78 164 aa3.56□□□□□ -1.84
PTCH1-214ENST00000547615 C1orf64Q8NEQ6 169 aa3.56□□□□□ -1.84
PTCH1-214ENST00000547615 HCG22E2RYF7 251 aa3.55□□□□□ -1.84
PTCH1-214ENST00000547615 CASC2Q6XLA1 102 aa3.55□□□□□ -1.84
PTCH1-214ENST00000547615 KRTAP8-1Q8IUC2 63 aa3.55□□□□□ -1.84
PTCH1-214ENST00000547615 BPY2O14599 106 aa3.54□□□□□ -1.84
PTCH1-214ENST00000547615 SPRR2DP22532 72 aa3.54□□□□□ -1.84
PTCH1-214ENST00000547615 UBL5Q9BZL1 73 aa3.54□□□□□ -1.84
PTCH1-214ENST00000547615 CYSTM1Q9H1C7 97 aa3.54□□□□□ -1.84
PTCH1-214ENST00000547615 PRO0628Q9UI54 55 aa3.54□□□□□ -1.84
PTCH1-214ENST00000547615 SERP1Q9Y6X1 66 aa3.54□□□□□ -1.84
PTCH1-214ENST00000547615 LCE1AQ5T7P2 110 aa3.53□□□□□ -1.84
PTCH1-214ENST00000547615 C14orf132Q9NPU4 83 aa3.53□□□□□ -1.84
PTCH1-214ENST00000547615 SMIM26A0A096LP01 95 aa3.52□□□□□ -1.85
PTCH1-214ENST00000547615 KRTAP23-1A1A580 65 aa3.51□□□□□ -1.85
PTCH1-214ENST00000547615 NDUFC1O43677 76 aa3.51□□□□□ -1.85
PTCH1-214ENST00000547615 ATP5EP56381 51 aaPredicted RBP3.51□□□□□ -1.85
PTCH1-214ENST00000547615 TRAV7A0A075B6U4 112 aa3.5□□□□□ -1.85
PTCH1-214ENST00000547615 H7BZZ5 65 aa3.5□□□□□ -1.85
PTCH1-214ENST00000547615 KRTAP12-2P59991 146 aa3.5□□□□□ -1.85
PTCH1-214ENST00000547615 H0YAA0 97 aa3.49□□□□□ -1.85
PTCH1-214ENST00000547615 KRTAP3-1Q9BYR8 98 aa3.49□□□□□ -1.85
PTCH1-214ENST00000547615 A8MUN3 132 aa3.48□□□□□ -1.85
PTCH1-214ENST00000547615 PLAC4Q8WY50 150 aa3.48□□□□□ -1.85
PTCH1-214ENST00000547615 TP53AIP1Q9HCN2 124 aa3.48□□□□□ -1.85
PTCH1-214ENST00000547615 A0A087WVE0 104 aa3.46□□□□□ -1.86
PTCH1-214ENST00000547615 LCE3BQ5TA77 95 aa3.46□□□□□ -1.86
PTCH1-214ENST00000547615 C20orf197Q8N268 126 aa3.44□□□□□ -1.86
PTCH1-214ENST00000547615 MT1XP80297 61 aa3.42□□□□□ -1.86
PTCH1-214ENST00000547615 LCE4AQ5TA78 99 aa3.42□□□□□ -1.86
PTCH1-214ENST00000547615 Q8N9L7 120 aa3.4□□□□□ -1.87
PTCH1-214ENST00000547615 V9GYY9 64 aa3.4□□□□□ -1.87
PTCH1-214ENST00000547615 GPR98Q8WXG9 6306 aa3.39□□□□□ -1.87
PTCH1-214ENST00000547615 SEC61GP60059 68 aa3.39□□□□□ -1.87
PTCH1-214ENST00000547615 R4GN34 69 aa3.38□□□□□ -1.87
PTCH1-214ENST00000547615 LOC101927531A0A1B0GV80 90 aa3.37□□□□□ -1.87
PTCH1-214ENST00000547615 Q1T7F1 81 aa3.37□□□□□ -1.87
PTCH1-214ENST00000547615 KRTAP9-9Q9BYP9 154 aa3.37□□□□□ -1.87
PTCH1-214ENST00000547615 KRTAP9-4Q9BYQ2 154 aa3.37□□□□□ -1.87
PTCH1-214ENST00000547615 OCR1Q9BZK8 76 aa3.37□□□□□ -1.87
PTCH1-214ENST00000547615 CYP4F30PQ9H0H9 118 aa3.36□□□□□ -1.87
PTCH1-214ENST00000547615 A0A0A0MQY5 61 aa3.35□□□□□ -1.87
PTCH1-214ENST00000547615 ADM2Q7Z4H4 148 aa3.35□□□□□ -1.87
PTCH1-214ENST00000547615 SNURFQ9Y675 71 aa3.35□□□□□ -1.87
PTCH1-214ENST00000547615 TRAV22A0A0B4J277 110 aa3.34□□□□□ -1.87
PTCH1-214ENST00000547615 PMAIP1Q13794 54 aa3.34□□□□□ -1.87
PTCH1-214ENST00000547615 BRK1Q8WUW1 75 aa3.33□□□□□ -1.88
PTCH1-214ENST00000547615 H3BPC8 53 aa3.32□□□□□ -1.88
PTCH1-214ENST00000547615 DSTQ03001 7570 aaKnown RBP3.32□□□□□ -1.88
PTCH1-214ENST00000547615 KRTAP4-8A0A0G2JLE6 195 aa3.3□□□□□ -1.88
PTCH1-214ENST00000547615 KRTAP10-12P60413 245 aa3.29□□□□□ -1.88
PTCH1-214ENST00000547615 M0QZ58 72 aa3.28□□□□□ -1.88
PTCH1-214ENST00000547615 MP68P56378 58 aa3.28□□□□□ -1.88
PTCH1-214ENST00000547615 SPANXA2-OT1Q8N9U9 137 aa3.26□□□□□ -1.89
PTCH1-214ENST00000547615 KRTAP10-7P60409 375 aaPredicted RBP3.23□□□□□ -1.89
PTCH1-214ENST00000547615 LCE1DQ5T752 114 aa3.23□□□□□ -1.89
PTCH1-214ENST00000547615 LINC01554Q52M75 96 aa3.22□□□□□ -1.89
PTCH1-214ENST00000547615 KTN1-AS1Q86SY8 53 aa3.21□□□□□ -1.9
PTCH1-214ENST00000547615 KRTAP4-9Q9BYQ8 210 aa3.2□□□□□ -1.9
PTCH1-214ENST00000547615 H0Y9P7 68 aa3.19□□□□□ -1.9
PTCH1-214ENST00000547615 P0C880 135 aa3.18□□□□□ -1.9
PTCH1-214ENST00000547615 LCE5AQ5TCM9 118 aa3.18□□□□□ -1.9
PTCH1-214ENST00000547615 PSPHP1O15172 72 aa3.16□□□□□ -1.9
PTCH1-214ENST00000547615 LINC00208Q96KT6 92 aa3.16□□□□□ -1.9
PTCH1-214ENST00000547615 CDC42SE1Q9NRR8 79 aa3.16□□□□□ -1.9
PTCH1-214ENST00000547615 LINC01558Q9Y6Z2 57 aa3.16□□□□□ -1.9
PTCH1-214ENST00000547615 KRTAP15-1Q3LI76 137 aa3.15□□□□□ -1.91
PTCH1-214ENST00000547615 CHKB-CPT1BH3BT56 60 aa3.14□□□□□ -1.91
PTCH1-214ENST00000547615 KRTAP19-3Q7Z4W3 81 aa3.14□□□□□ -1.91
PTCH1-214ENST00000547615 PP632Q6XCG6 107 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms