RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 KRTAP10-8P60410 259 aa6.73□□□□□ -1.33
BRF1-210ENST00000547374 FAT3Q8TDW7 4589 aa6.72□□□□□ -1.33
BRF1-210ENST00000547374 C10orf95Q9H7T3 257 aa6.72□□□□□ -1.33
BRF1-210ENST00000547374 APOBP04114 4563 aaKnown RBP6.72□□□□□ -1.33
BRF1-210ENST00000547374 RPL37P61927 97 aaKnown RBP6.72□□□□□ -1.33
BRF1-210ENST00000547374 P0C880 135 aa6.7□□□□□ -1.34
BRF1-210ENST00000547374 KRTAP13-4Q3LI77 160 aa6.68□□□□□ -1.34
BRF1-210ENST00000547374 A0A1B0GVY2 172 aa6.68□□□□□ -1.34
BRF1-210ENST00000547374 KRTAP10-4P60372 401 aaPredicted RBP6.68□□□□□ -1.34
BRF1-210ENST00000547374 ROMO1P60602 79 aa6.67□□□□□ -1.34
BRF1-210ENST00000547374 KMT2CQ8NEZ4 4911 aaKnown RBP6.66□□□□□ -1.34
BRF1-210ENST00000547374 XP32Q5T750 250 aa6.65□□□□□ -1.34
BRF1-210ENST00000547374 HSPG2P98160 4391 aa6.6□□□□□ -1.35
BRF1-210ENST00000547374 KRTAP10-6P60371 365 aaPredicted RBP6.6□□□□□ -1.35
BRF1-210ENST00000547374 KRTAP3-3Q9BYR6 98 aa6.58□□□□□ -1.36
BRF1-210ENST00000547374 KIAA1109Q2LD37 5005 aa6.57□□□□□ -1.36
BRF1-210ENST00000547374 TPRXLQ17RH7 258 aa6.51□□□□□ -1.37
BRF1-210ENST00000547374 KRTAP12-2P59991 146 aa6.51□□□□□ -1.37
BRF1-210ENST00000547374 KRTAP21-3Q3LHN1 58 aa6.51□□□□□ -1.37
BRF1-210ENST00000547374 KRTAP3-2Q9BYR7 98 aa6.5□□□□□ -1.37
BRF1-210ENST00000547374 LRP2P98164 4655 aa6.5□□□□□ -1.37
BRF1-210ENST00000547374 PKHD1L1Q86WI1 4243 aa6.5□□□□□ -1.37
BRF1-210ENST00000547374 RYR1P21817 5038 aa6.48□□□□□ -1.37
BRF1-210ENST00000547374 NDUFAF8A1L188 74 aa6.47□□□□□ -1.37
BRF1-210ENST00000547374 LPAP08519 4548 aa6.46□□□□□ -1.37
BRF1-210ENST00000547374 M0QZ58 72 aa6.46□□□□□ -1.38
BRF1-210ENST00000547374 RYR2Q92736 4967 aa6.45□□□□□ -1.38
BRF1-210ENST00000547374 RYR3Q15413 4870 aa6.45□□□□□ -1.38
BRF1-210ENST00000547374 KRTAP17-1Q9BYP8 105 aa6.44□□□□□ -1.38
BRF1-210ENST00000547374 R4GN34 69 aa6.42□□□□□ -1.38
BRF1-210ENST00000547374 KRTAP12-1P59990 96 aa6.36□□□□□ -1.39
BRF1-210ENST00000547374 MT1HL1P0DM35 61 aa6.34□□□□□ -1.39
BRF1-210ENST00000547374 J3QL48 77 aa6.33□□□□□ -1.4
BRF1-210ENST00000547374 TNXBP22105 4242 aa6.32□□□□□ -1.4
BRF1-210ENST00000547374 LUZP6Q538Z0 58 aa6.28□□□□□ -1.4
BRF1-210ENST00000547374 KRTAP4-5Q9BYR2 181 aa6.27□□□□□ -1.41
BRF1-210ENST00000547374 CAMK2N1Q7Z7J9 78 aa6.23□□□□□ -1.41
BRF1-210ENST00000547374 ABCA13Q86UQ4 5058 aa6.23□□□□□ -1.41
BRF1-210ENST00000547374 LORP23490 312 aaPredicted RBP6.2□□□□□ -1.42
BRF1-210ENST00000547374 EPPK1P58107 5090 aaKnown RBP6.17□□□□□ -1.42
BRF1-210ENST00000547374 SEC61BP60468 96 aaKnown RBP6.16□□□□□ -1.42
BRF1-210ENST00000547374 MUC2Q02817 5179 aa6.15□□□□□ -1.42
BRF1-210ENST00000547374 KRTAP15-1Q3LI76 137 aa6.08□□□□□ -1.44
BRF1-210ENST00000547374 KRTAP4-1Q9BYQ7 146 aa6.05□□□□□ -1.44
BRF1-210ENST00000547374 PLAC4Q8WY50 150 aa6.01□□□□□ -1.45
BRF1-210ENST00000547374 HERC2O95714 4834 aa5.95□□□□□ -1.46
BRF1-210ENST00000547374 M0R2T5 61 aa5.93□□□□□ -1.46
BRF1-210ENST00000547374 FAT4Q6V0I7 4981 aa5.84□□□□□ -1.47
BRF1-210ENST00000547374 TNP1P09430 55 aa5.78□□□□□ -1.48
BRF1-210ENST00000547374 HERC1Q15751 4861 aa5.78□□□□□ -1.48
BRF1-210ENST00000547374 MUC17Q685J3 4493 aa5.75□□□□□ -1.49
BRF1-210ENST00000547374 RNF213Q63HN8 5207 aa5.75□□□□□ -1.49
BRF1-210ENST00000547374 PP632Q6XCG6 107 aa5.68□□□□□ -1.5
BRF1-210ENST00000547374 PCLOQ9Y6V0 5065 aa5.64□□□□□ -1.51
BRF1-210ENST00000547374 KRTAP10-10P60014 251 aa5.61□□□□□ -1.51
BRF1-210ENST00000547374 KRTAP19-2Q3LHN2 52 aa5.6□□□□□ -1.51
BRF1-210ENST00000547374 FLGP20930 4061 aaPredicted RBP5.54□□□□□ -1.52
BRF1-210ENST00000547374 UBR4Q5T4S7 5183 aa5.52□□□□□ -1.53
BRF1-210ENST00000547374 HMCN2Q8NDA2 5059 aa5.48□□□□□ -1.53
BRF1-210ENST00000547374 LCE3AQ5TA76 89 aa5.44□□□□□ -1.54
BRF1-210ENST00000547374 BIRC6Q9NR09 4857 aa5.43□□□□□ -1.54
BRF1-210ENST00000547374 KRTAP19-1Q8IUB9 90 aa5.38□□□□□ -1.55
BRF1-210ENST00000547374 LCE2CQ5TA81 110 aa5.35□□□□□ -1.55
BRF1-210ENST00000547374 MT1FP04733 61 aa5.34□□□□□ -1.55
BRF1-210ENST00000547374 MT1HP80294 61 aa5.33□□□□□ -1.56
BRF1-210ENST00000547374 SPRR2GQ9BYE4 73 aa5.29□□□□□ -1.56
BRF1-210ENST00000547374 MT2AP02795 61 aa5.29□□□□□ -1.56
BRF1-210ENST00000547374 USH2AO75445 5202 aa5.22□□□□□ -1.57
BRF1-210ENST00000547374 KRTAP10-12P60413 245 aa5.16□□□□□ -1.58
BRF1-210ENST00000547374 KMT2DO14686 5537 aa5.16□□□□□ -1.58
BRF1-210ENST00000547374 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
BRF1-210ENST00000547374 KRTAP12-3P60328 96 aa5.15□□□□□ -1.58
BRF1-210ENST00000547374 KRTAP9-8Q9BYQ0 159 aa5.14□□□□□ -1.59
BRF1-210ENST00000547374 FSIP2Q5CZC0 6907 aa5.12□□□□□ -1.59
BRF1-210ENST00000547374 SPRR5A0A1B0GTR4 108 aa5.1□□□□□ -1.59
BRF1-210ENST00000547374 KRTAP10-7P60409 375 aaPredicted RBP5.1□□□□□ -1.59
BRF1-210ENST00000547374 PRO2289Q9P1D8 64 aa5.08□□□□□ -1.6
BRF1-210ENST00000547374 MT1XP80297 61 aa5.08□□□□□ -1.6
BRF1-210ENST00000547374 MT1BP07438 61 aa5.07□□□□□ -1.6
BRF1-210ENST00000547374 KRTAP10-5P60370 271 aa5.07□□□□□ -1.6
BRF1-210ENST00000547374 KRTAP8-1Q8IUC2 63 aa5.03□□□□□ -1.6
BRF1-210ENST00000547374 KRTAP19-8Q3LI54 63 aa4.97□□□□□ -1.61
BRF1-210ENST00000547374 KRTAP19-5Q3LI72 72 aa4.92□□□□□ -1.62
BRF1-210ENST00000547374 KRTAP4-8A0A0G2JLE6 195 aa4.91□□□□□ -1.62
BRF1-210ENST00000547374 KRTAP4-8Q9BYQ9 185 aa4.91□□□□□ -1.62
BRF1-210ENST00000547374 KRTAP9-3Q9BYQ3 159 aa4.9□□□□□ -1.63
BRF1-210ENST00000547374 LCE2BO14633 110 aa4.81□□□□□ -1.64
BRF1-210ENST00000547374 KRTAP4-7Q9BYR0 210 aa4.79□□□□□ -1.64
BRF1-210ENST00000547374 INE1O15225 51 aa4.79□□□□□ -1.64
BRF1-210ENST00000547374 OBSCNQ5VST9 7968 aa4.75□□□□□ -1.65
BRF1-210ENST00000547374 LCE3CQ5T5A8 94 aa4.75□□□□□ -1.65
BRF1-210ENST00000547374 DSTQ03001 7570 aaKnown RBP4.72□□□□□ -1.65
BRF1-210ENST00000547374 CRCT1Q9UGL9 99 aa4.69□□□□□ -1.66
BRF1-210ENST00000547374 KRTAP9-6A8MVA2 160 aa4.61□□□□□ -1.67
BRF1-210ENST00000547374 FCGBPQ9Y6R7 5405 aaPredicted RBP4.61□□□□□ -1.67
BRF1-210ENST00000547374 SYNE1Q8NF91 8797 aaKnown RBP4.58□□□□□ -1.68
BRF1-210ENST00000547374 MUC12Q9UKN1 5478 aa4.54□□□□□ -1.68
BRF1-210ENST00000547374 KRTAP19-7Q3SYF9 63 aa4.49□□□□□ -1.69
BRF1-210ENST00000547374 KRTAP4-3Q9BYR4 195 aa4.46□□□□□ -1.7
BRF1-210ENST00000547374 SSPOA2VEC9 5147 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms