RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 FP248Q71RG6 208 aaPredicted RBP2.56□□□□□ -2
NPAS3-204ENST00000546849 SNURFQ9Y675 71 aa2.56□□□□□ -2
NPAS3-204ENST00000546849 A0A087WSZ3 146 aa2.55□□□□□ -2
NPAS3-204ENST00000546849 NBDYA0A0U1RRE5 68 aa2.55□□□□□ -2
NPAS3-204ENST00000546849 LCE6AA0A183 80 aa2.55□□□□□ -2
NPAS3-204ENST00000546849 A8MUN3 132 aa2.55□□□□□ -2
NPAS3-204ENST00000546849 CASC2Q6XLA1 102 aa2.55□□□□□ -2
NPAS3-204ENST00000546849 LIMD2Q9BT23 127 aa2.55□□□□□ -2
NPAS3-204ENST00000546849 DNAH10Q8IVF4 4471 aa2.54□□□□□ -2
NPAS3-204ENST00000546849 K7EIL1 84 aa2.54□□□□□ -2
NPAS3-204ENST00000546849 LCA10Q71F78 164 aa2.54□□□□□ -2
NPAS3-204ENST00000546849 CYP4F30PQ9H0H9 118 aa2.54□□□□□ -2
NPAS3-204ENST00000546849 APLNQ9ULZ1 77 aa2.54□□□□□ -2
NPAS3-204ENST00000546849 A0A096LNI7 61 aa2.53□□□□□ -2
NPAS3-204ENST00000546849 TRAV22A0A0B4J277 110 aa2.53□□□□□ -2
NPAS3-204ENST00000546849 PSORS1C2Q9UIG4 136 aa2.53□□□□□ -2
NPAS3-204ENST00000546849 PRLHP81277 87 aa2.52□□□□□ -2.01
NPAS3-204ENST00000546849 FAM229BQ4G0N7 80 aa2.52□□□□□ -2.01
NPAS3-204ENST00000546849 SSBP3-AS1Q7Z2R9 100 aa2.52□□□□□ -2.01
NPAS3-204ENST00000546849 CYSTM1Q9H1C7 97 aa2.52□□□□□ -2.01
NPAS3-204ENST00000546849 H0Y9P7 68 aa2.51□□□□□ -2.01
NPAS3-204ENST00000546849 K7EQZ3 153 aa2.51□□□□□ -2.01
NPAS3-204ENST00000546849 Q1T7F1 81 aa2.51□□□□□ -2.01
NPAS3-204ENST00000546849 C1orf134Q5TEV5 83 aa2.51□□□□□ -2.01
NPAS3-204ENST00000546849 PHF5AQ7RTV0 110 aaKnown RBP2.51□□□□□ -2.01
NPAS3-204ENST00000546849 LINC00208Q96KT6 92 aa2.51□□□□□ -2.01
NPAS3-204ENST00000546849 PRR15LQ9BU68 103 aa2.51□□□□□ -2.01
NPAS3-204ENST00000546849 PKHD1P08F94 4074 aa2.51□□□□□ -2.01
NPAS3-204ENST00000546849 HUWE1Q7Z6Z7 4374 aaKnown RBP2.51□□□□□ -2.01
NPAS3-204ENST00000546849 FAT4Q6V0I7 4981 aa2.5□□□□□ -2.01
NPAS3-204ENST00000546849 LOC101927531A0A1B0GV80 90 aa2.5□□□□□ -2.01
NPAS3-204ENST00000546849 M0R2N4 97 aa2.5□□□□□ -2.01
NPAS3-204ENST00000546849 WFDC13Q8IUB5 93 aa2.5□□□□□ -2.01
NPAS3-204ENST00000546849 SRRM2Q9UQ35 2752 aaKnown RBP2.5□□□□□ -2.01
NPAS3-204ENST00000546849 SPACA4Q8TDM5 124 aa2.49□□□□□ -2.01
NPAS3-204ENST00000546849 RNF213Q63HN8 5207 aa2.48□□□□□ -2.01
NPAS3-204ENST00000546849 ALMS1Q8TCU4 4167 aa2.48□□□□□ -2.01
NPAS3-204ENST00000546849 A0A087WTM6 91 aa2.48□□□□□ -2.01
NPAS3-204ENST00000546849 C7orf65Q6ZTY9 151 aa2.48□□□□□ -2.01
NPAS3-204ENST00000546849 MRPL34Q9BQ48 92 aaKnown RBP2.48□□□□□ -2.01
NPAS3-204ENST00000546849 LINC00472Q9H8W2 130 aa2.48□□□□□ -2.01
NPAS3-204ENST00000546849 PLAC8Q9NZF1 115 aa2.48□□□□□ -2.01
NPAS3-204ENST00000546849 HSPG2P98160 4391 aa2.48□□□□□ -2.01
NPAS3-204ENST00000546849 DYNC1H1Q14204 4646 aaKnown RBP2.48□□□□□ -2.01
NPAS3-204ENST00000546849 HMCN2Q8NDA2 5059 aa2.47□□□□□ -2.01
NPAS3-204ENST00000546849 ACYP2P14621 99 aa2.47□□□□□ -2.01
NPAS3-204ENST00000546849 ASB16-AS1Q495Z4 193 aa2.47□□□□□ -2.01
NPAS3-204ENST00000546849 SPTSSBQ8NFR3 76 aa2.47□□□□□ -2.01
NPAS3-204ENST00000546849 FLG2Q5D862 2391 aaPredicted RBP2.47□□□□□ -2.01
NPAS3-204ENST00000546849 CHKB-CPT1BH3BT56 60 aa2.46□□□□□ -2.02
NPAS3-204ENST00000546849 LINC01554Q52M75 96 aa2.46□□□□□ -2.02
NPAS3-204ENST00000546849 FAT2Q9NYQ8 4349 aa2.46□□□□□ -2.02
NPAS3-204ENST00000546849 MYCBP2O75592 4640 aa2.45□□□□□ -2.02
NPAS3-204ENST00000546849 A6NN06 94 aa2.45□□□□□ -2.02
NPAS3-204ENST00000546849 KRTAP12-1P59990 96 aa2.45□□□□□ -2.02
NPAS3-204ENST00000546849 SPAG11AQ6PDA7 123 aa2.45□□□□□ -2.02
NPAS3-204ENST00000546849 DNAH11Q96DT5 4516 aa2.44□□□□□ -2.02
NPAS3-204ENST00000546849 MMP24-AS1A0A0U1RRL7 71 aa2.44□□□□□ -2.02
NPAS3-204ENST00000546849 LY6G6CO95867 125 aa2.43□□□□□ -2.02
NPAS3-204ENST00000546849 Q6ZRN7 208 aaPredicted RBP2.43□□□□□ -2.02
NPAS3-204ENST00000546849 SPINK1P00995 79 aa2.42□□□□□ -2.02
NPAS3-204ENST00000546849 RPS29P62273 56 aaKnown RBP2.42□□□□□ -2.02
NPAS3-204ENST00000546849 ATP11AUNQ6ZP68 121 aa2.42□□□□□ -2.02
NPAS3-204ENST00000546849 COA5Q86WW8 74 aa2.41□□□□□ -2.02
NPAS3-204ENST00000546849 SPINK6Q6UWN8 80 aa2.4□□□□□ -2.03
NPAS3-204ENST00000546849 LINC01558Q9Y6Z2 57 aa2.4□□□□□ -2.03
NPAS3-204ENST00000546849 APOBP04114 4563 aaKnown RBP2.39□□□□□ -2.03
NPAS3-204ENST00000546849 PCOTHQ58A44 107 aa2.39□□□□□ -2.03
NPAS3-204ENST00000546849 A0A1B0GU69 56 aa2.38□□□□□ -2.03
NPAS3-204ENST00000546849 CDC42SE1Q9NRR8 79 aa2.38□□□□□ -2.03
NPAS3-204ENST00000546849 DNAH17Q9UFH2 4485 aa2.37□□□□□ -2.03
NPAS3-204ENST00000546849 Q96NJ1 140 aa2.37□□□□□ -2.03
NPAS3-204ENST00000546849 DNAH2Q9P225 4427 aa2.37□□□□□ -2.03
NPAS3-204ENST00000546849 DNAH6Q9C0G6 4158 aa2.36□□□□□ -2.03
NPAS3-204ENST00000546849 UQCR11O14957 56 aa2.36□□□□□ -2.03
NPAS3-204ENST00000546849 DMAC1Q96GE9 116 aa2.36□□□□□ -2.03
NPAS3-204ENST00000546849 VPS13DQ5THJ4 4388 aa2.36□□□□□ -2.03
NPAS3-204ENST00000546849 FSIP2Q5CZC0 6907 aa2.35□□□□□ -2.03
NPAS3-204ENST00000546849 A0A0G2JQZ4 141 aa2.35□□□□□ -2.03
NPAS3-204ENST00000546849 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
NPAS3-204ENST00000546849 CRCT1Q9UGL9 99 aa2.35□□□□□ -2.03
NPAS3-204ENST00000546849 PKD1P98161 4303 aa2.35□□□□□ -2.03
NPAS3-204ENST00000546849 FAT1Q14517 4588 aa2.35□□□□□ -2.03
NPAS3-204ENST00000546849 Q5VV11 94 aa2.34□□□□□ -2.03
NPAS3-204ENST00000546849 Q6ZSA8 131 aa2.34□□□□□ -2.03
NPAS3-204ENST00000546849 RETNLBQ9BQ08 111 aa2.33□□□□□ -2.04
NPAS3-204ENST00000546849 LRP2P98164 4655 aa2.32□□□□□ -2.04
NPAS3-204ENST00000546849 KRTAP13-4Q3LI77 160 aa2.32□□□□□ -2.04
NPAS3-204ENST00000546849 VPS13BQ7Z7G8 4022 aa2.32□□□□□ -2.04
NPAS3-204ENST00000546849 LRP1BQ9NZR2 4599 aa2.31□□□□□ -2.04
NPAS3-204ENST00000546849 MIR22HGQ0VDD5 57 aa2.3□□□□□ -2.04
NPAS3-204ENST00000546849 DNAH5Q8TE73 4624 aa2.28□□□□□ -2.04
NPAS3-204ENST00000546849 PKHD1L1Q86WI1 4243 aa2.28□□□□□ -2.04
NPAS3-204ENST00000546849 ROMO1P60602 79 aa2.27□□□□□ -2.05
NPAS3-204ENST00000546849 SPATA8Q6RVD6 105 aa2.27□□□□□ -2.05
NPAS3-204ENST00000546849 PRO2289Q9P1D8 64 aa2.27□□□□□ -2.05
NPAS3-204ENST00000546849 SPINK7P58062 85 aa2.23□□□□□ -2.05
NPAS3-204ENST00000546849 TPRXLQ17RH7 258 aa2.21□□□□□ -2.06
NPAS3-204ENST00000546849 COX6B2Q6YFQ2 88 aa2.21□□□□□ -2.06
NPAS3-204ENST00000546849 LRP1Q07954 4544 aaKnown RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms