RNA–Protein interactions for RNA: ENST00000546728.5

SART3-204, Transcript of squamous cell carcinoma antigen recognized by T cells 3, humanhuman

TSL 1 (best)

Gene SART3, Length 3,637 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SART3-204ENST00000546728 PKHD1P08F94 4074 aa4.49□□□□□ -1.69
SART3-204ENST00000546728 KRTAP3-1Q9BYR8 98 aa4.48□□□□□ -1.69
SART3-204ENST00000546728 P0C880 135 aa4.47□□□□□ -1.69
SART3-204ENST00000546728 DYNC1H1Q14204 4646 aaKnown RBP4.47□□□□□ -1.69
SART3-204ENST00000546728 FAT1Q14517 4588 aa4.46□□□□□ -1.69
SART3-204ENST00000546728 Q5VSD8 79 aa4.46□□□□□ -1.69
SART3-204ENST00000546728 M0QZ58 72 aa4.46□□□□□ -1.7
SART3-204ENST00000546728 R4GN34 69 aa4.46□□□□□ -1.7
SART3-204ENST00000546728 C20orf166-AS1Q96NR2 134 aa4.45□□□□□ -1.7
SART3-204ENST00000546728 RYR2Q92736 4967 aa4.45□□□□□ -1.7
SART3-204ENST00000546728 FAT2Q9NYQ8 4349 aa4.45□□□□□ -1.7
SART3-204ENST00000546728 CAMK2N1Q7Z7J9 78 aa4.43□□□□□ -1.7
SART3-204ENST00000546728 TPRXLQ17RH7 258 aa4.41□□□□□ -1.7
SART3-204ENST00000546728 LUZP6Q538Z0 58 aa4.41□□□□□ -1.7
SART3-204ENST00000546728 PKD1P98161 4303 aa4.4□□□□□ -1.7
SART3-204ENST00000546728 VPS13BQ7Z7G8 4022 aa4.4□□□□□ -1.71
SART3-204ENST00000546728 KRTAP13-4Q3LI77 160 aa4.4□□□□□ -1.71
SART3-204ENST00000546728 KIAA1109Q2LD37 5005 aa4.38□□□□□ -1.71
SART3-204ENST00000546728 RYR3Q15413 4870 aa4.37□□□□□ -1.71
SART3-204ENST00000546728 KRTAP12-2P59991 146 aa4.35□□□□□ -1.71
SART3-204ENST00000546728 KRTAP10-8P60410 259 aa4.34□□□□□ -1.71
SART3-204ENST00000546728 RPS29P62273 56 aaKnown RBP4.34□□□□□ -1.71
SART3-204ENST00000546728 APOBP04114 4563 aaKnown RBP4.34□□□□□ -1.71
SART3-204ENST00000546728 KRTAP10-4P60372 401 aaPredicted RBP4.33□□□□□ -1.72
SART3-204ENST00000546728 MYCBP2O75592 4640 aa4.33□□□□□ -1.72
SART3-204ENST00000546728 XP32Q5T750 250 aa4.31□□□□□ -1.72
SART3-204ENST00000546728 KRTAP17-1Q9BYP8 105 aa4.3□□□□□ -1.72
SART3-204ENST00000546728 KRTAP10-6P60371 365 aaPredicted RBP4.3□□□□□ -1.72
SART3-204ENST00000546728 LRP1Q07954 4544 aaKnown RBP4.28□□□□□ -1.72
SART3-204ENST00000546728 KRTAP4-5Q9BYR2 181 aa4.27□□□□□ -1.73
SART3-204ENST00000546728 EPPK1P58107 5090 aaKnown RBP4.27□□□□□ -1.73
SART3-204ENST00000546728 RYR1P21817 5038 aa4.25□□□□□ -1.73
SART3-204ENST00000546728 LCE2CQ5TA81 110 aa4.24□□□□□ -1.73
SART3-204ENST00000546728 FAT3Q8TDW7 4589 aa4.23□□□□□ -1.73
SART3-204ENST00000546728 KRTAP12-1P59990 96 aa4.23□□□□□ -1.73
SART3-204ENST00000546728 PLAC4Q8WY50 150 aa4.22□□□□□ -1.73
SART3-204ENST00000546728 HSPG2P98160 4391 aa4.22□□□□□ -1.73
SART3-204ENST00000546728 PKHD1L1Q86WI1 4243 aa4.22□□□□□ -1.73
SART3-204ENST00000546728 KRTAP15-1Q3LI76 137 aa4.21□□□□□ -1.73
SART3-204ENST00000546728 LCE2BO14633 110 aa4.21□□□□□ -1.74
SART3-204ENST00000546728 MT1HL1P0DM35 61 aa4.17□□□□□ -1.74
SART3-204ENST00000546728 KRTAP23-1A1A580 65 aa4.14□□□□□ -1.75
SART3-204ENST00000546728 M0R2T5 61 aa4.14□□□□□ -1.75
SART3-204ENST00000546728 LCE2AQ5TA79 106 aaPredicted RBP4.08□□□□□ -1.76
SART3-204ENST00000546728 HERC2O95714 4834 aa4.07□□□□□ -1.76
SART3-204ENST00000546728 ABCA13Q86UQ4 5058 aa4.07□□□□□ -1.76
SART3-204ENST00000546728 BIRC6Q9NR09 4857 aa4.03□□□□□ -1.76
SART3-204ENST00000546728 TNXBP22105 4242 aa4.02□□□□□ -1.77
SART3-204ENST00000546728 LRP2P98164 4655 aa4.02□□□□□ -1.77
SART3-204ENST00000546728 TNP1P09430 55 aa4.01□□□□□ -1.77
SART3-204ENST00000546728 LPAP08519 4548 aa4.01□□□□□ -1.77
SART3-204ENST00000546728 LORP23490 312 aaPredicted RBP4□□□□□ -1.77
SART3-204ENST00000546728 MUC2Q02817 5179 aa3.95□□□□□ -1.78
SART3-204ENST00000546728 PP632Q6XCG6 107 aa3.92□□□□□ -1.78
SART3-204ENST00000546728 PCLOQ9Y6V0 5065 aa3.9□□□□□ -1.78
SART3-204ENST00000546728 HERC1Q15751 4861 aa3.89□□□□□ -1.79
SART3-204ENST00000546728 KRTAP4-1Q9BYQ7 146 aa3.84□□□□□ -1.8
SART3-204ENST00000546728 KRTAP10-10P60014 251 aa3.77□□□□□ -1.81
SART3-204ENST00000546728 RNF213Q63HN8 5207 aa3.74□□□□□ -1.81
SART3-204ENST00000546728 FAT4Q6V0I7 4981 aa3.72□□□□□ -1.81
SART3-204ENST00000546728 HMCN2Q8NDA2 5059 aa3.71□□□□□ -1.82
SART3-204ENST00000546728 UBR4Q5T4S7 5183 aa3.71□□□□□ -1.82
SART3-204ENST00000546728 MUC17Q685J3 4493 aa3.62□□□□□ -1.83
SART3-204ENST00000546728 LCE3AQ5TA76 89 aa3.62□□□□□ -1.83
SART3-204ENST00000546728 KRTAP19-2Q3LHN2 52 aa3.57□□□□□ -1.84
SART3-204ENST00000546728 FSIP2Q5CZC0 6907 aa3.55□□□□□ -1.84
SART3-204ENST00000546728 SPRR5A0A1B0GTR4 108 aa3.52□□□□□ -1.85
SART3-204ENST00000546728 MT1HP80294 61 aa3.52□□□□□ -1.85
SART3-204ENST00000546728 FLGP20930 4061 aaPredicted RBP3.51□□□□□ -1.85
SART3-204ENST00000546728 PRO2289Q9P1D8 64 aa3.48□□□□□ -1.85
SART3-204ENST00000546728 KRTAP12-3P60328 96 aa3.47□□□□□ -1.85
SART3-204ENST00000546728 KRTAP10-12P60413 245 aa3.45□□□□□ -1.86
SART3-204ENST00000546728 MT2AP02795 61 aa3.41□□□□□ -1.86
SART3-204ENST00000546728 MT1FP04733 61 aa3.41□□□□□ -1.86
SART3-204ENST00000546728 INE1O15225 51 aa3.38□□□□□ -1.87
SART3-204ENST00000546728 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
SART3-204ENST00000546728 KRTAP19-1Q8IUB9 90 aa3.36□□□□□ -1.87
SART3-204ENST00000546728 KRTAP9-8Q9BYQ0 159 aa3.36□□□□□ -1.87
SART3-204ENST00000546728 USH2AO75445 5202 aa3.35□□□□□ -1.87
SART3-204ENST00000546728 CRCT1Q9UGL9 99 aa3.34□□□□□ -1.88
SART3-204ENST00000546728 SPRR2GQ9BYE4 73 aa3.32□□□□□ -1.88
SART3-204ENST00000546728 KRTAP10-7P60409 375 aaPredicted RBP3.27□□□□□ -1.89
SART3-204ENST00000546728 KRTAP8-1Q8IUC2 63 aa3.26□□□□□ -1.89
SART3-204ENST00000546728 KMT2DO14686 5537 aa3.24□□□□□ -1.89
SART3-204ENST00000546728 KRTAP9-3Q9BYQ3 159 aa3.23□□□□□ -1.89
SART3-204ENST00000546728 KRTAP19-5Q3LI72 72 aa3.22□□□□□ -1.89
SART3-204ENST00000546728 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
SART3-204ENST00000546728 MT1BP07438 61 aa3.19□□□□□ -1.9
SART3-204ENST00000546728 MT1XP80297 61 aa3.19□□□□□ -1.9
SART3-204ENST00000546728 KRTAP10-5P60370 271 aa3.18□□□□□ -1.9
SART3-204ENST00000546728 DSTQ03001 7570 aaKnown RBP3.17□□□□□ -1.9
SART3-204ENST00000546728 KRTAP4-8A0A0G2JLE6 195 aa3.16□□□□□ -1.9
SART3-204ENST00000546728 KRTAP19-8Q3LI54 63 aa3.16□□□□□ -1.9
SART3-204ENST00000546728 KRTAP4-8Q9BYQ9 185 aa3.16□□□□□ -1.9
SART3-204ENST00000546728 LCE3CQ5T5A8 94 aa3.13□□□□□ -1.91
SART3-204ENST00000546728 KRTAP4-7Q9BYR0 210 aa3.13□□□□□ -1.91
SART3-204ENST00000546728 FCGBPQ9Y6R7 5405 aaPredicted RBP3.08□□□□□ -1.92
SART3-204ENST00000546728 LCE4AQ5TA78 99 aa3.03□□□□□ -1.92
SART3-204ENST00000546728 SSPOA2VEC9 5147 aa3□□□□□ -1.93
SART3-204ENST00000546728 KRTAP9-4Q9BYQ2 154 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms