RNA–Protein interactions for RNA: ENST00000546407.1

CFTR-207, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

TSL 1 (best)

Gene CFTR, Length 222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-207ENST00000546407 UNC79Q9P2D8 2635 aa0.57□□□□□ -2.32
CFTR-207ENST00000546407 DNAH1Q9P2D7 4330 aa0.57□□□□□ -2.32
CFTR-207ENST00000546407 ACACBO00763 2458 aa0.57□□□□□ -2.32
CFTR-207ENST00000546407 ZFHX4Q86UP3 3567 aa0.57□□□□□ -2.32
CFTR-207ENST00000546407 WDFY4Q6ZS81 3184 aa0.57□□□□□ -2.32
CFTR-207ENST00000546407 VPS13AQ96RL7 3174 aa0.57□□□□□ -2.32
CFTR-207ENST00000546407 SPENQ96T58 3664 aaKnown RBP0.57□□□□□ -2.32
CFTR-207ENST00000546407 DMXL2Q8TDJ6 3036 aa0.56□□□□□ -2.32
CFTR-207ENST00000546407 NBEAL1Q6ZS30 2694 aa0.56□□□□□ -2.32
CFTR-207ENST00000546407 ZNF469Q96JG9 3925 aaPredicted RBP0.56□□□□□ -2.32
CFTR-207ENST00000546407 FRAS1Q86XX4 4008 aa0.56□□□□□ -2.32
CFTR-207ENST00000546407 PRM1P04553 51 aa0.56□□□□□ -2.32
CFTR-207ENST00000546407 MT1AP04731 61 aa0.56□□□□□ -2.32
CFTR-207ENST00000546407 KRTAP19-5Q3LI72 72 aa0.56□□□□□ -2.32
CFTR-207ENST00000546407 KRTAP5-2Q701N4 177 aa0.56□□□□□ -2.32
CFTR-207ENST00000546407 HUWE1Q7Z6Z7 4374 aaKnown RBP0.56□□□□□ -2.32
CFTR-207ENST00000546407 USP9XQ93008 2570 aaPredicted RBP0.56□□□□□ -2.32
CFTR-207ENST00000546407 FLNBO75369 2602 aaKnown RBP0.56□□□□□ -2.32
CFTR-207ENST00000546407 SETXQ7Z333 2677 aaKnown RBP0.56□□□□□ -2.32
CFTR-207ENST00000546407 FAT3Q8TDW7 4589 aa0.56□□□□□ -2.32
CFTR-207ENST00000546407 FAT2Q9NYQ8 4349 aa0.56□□□□□ -2.32
CFTR-207ENST00000546407 CELSR3Q9NYQ7 3312 aa0.56□□□□□ -2.32
CFTR-207ENST00000546407 PDZD2O15018 2839 aa0.56□□□□□ -2.32
CFTR-207ENST00000546407 SPTBN5Q9NRC6 3674 aaKnown RBP0.55□□□□□ -2.32
CFTR-207ENST00000546407 SZT2Q5T011 3432 aa0.55□□□□□ -2.32
CFTR-207ENST00000546407 FASNP49327 2511 aaKnown RBP0.55□□□□□ -2.32
CFTR-207ENST00000546407 DNAH17Q9UFH2 4485 aa0.55□□□□□ -2.32
CFTR-207ENST00000546407 LAMA3Q16787 3333 aa0.55□□□□□ -2.32
CFTR-207ENST00000546407 DMXL1Q9Y485 3027 aa0.55□□□□□ -2.32
CFTR-207ENST00000546407 TRRAPQ9Y4A5 3859 aa0.55□□□□□ -2.32
CFTR-207ENST00000546407 SVEP1Q4LDE5 3571 aa0.55□□□□□ -2.32
CFTR-207ENST00000546407 LAMA5O15230 3695 aa0.54□□□□□ -2.32
CFTR-207ENST00000546407 FLNAP21333 2647 aaKnown RBP0.54□□□□□ -2.32
CFTR-207ENST00000546407 BOD1L1Q8NFC6 3051 aa0.54□□□□□ -2.32
CFTR-207ENST00000546407 PLECQ15149 4684 aaKnown RBP0.54□□□□□ -2.32
CFTR-207ENST00000546407 NBEAL2Q6ZNJ1 2754 aa0.54□□□□□ -2.32
CFTR-207ENST00000546407 EP400Q96L91 3159 aa0.54□□□□□ -2.32
CFTR-207ENST00000546407 C5orf42Q9H799 3197 aa0.54□□□□□ -2.32
CFTR-207ENST00000546407 HSPG2P98160 4391 aa0.54□□□□□ -2.32
CFTR-207ENST00000546407 HMCN1Q96RW7 5635 aa0.54□□□□□ -2.32
CFTR-207ENST00000546407 PKD1L1Q8TDX9 2849 aa0.54□□□□□ -2.32
CFTR-207ENST00000546407 DNAH6Q9C0G6 4158 aa0.54□□□□□ -2.32
CFTR-207ENST00000546407 PKD1P98161 4303 aa0.54□□□□□ -2.32
CFTR-207ENST00000546407 MAST4O15021 2626 aa0.54□□□□□ -2.32
CFTR-207ENST00000546407 CEP295Q9C0D2 2601 aa0.54□□□□□ -2.32
CFTR-207ENST00000546407 GPR98Q8WXG9 6306 aa0.54□□□□□ -2.32
CFTR-207ENST00000546407 FREM2Q5SZK8 3169 aa0.54□□□□□ -2.32
CFTR-207ENST00000546407 RANBP2P49792 3224 aaKnown RBP0.54□□□□□ -2.32
CFTR-207ENST00000546407 PKHD1L1Q86WI1 4243 aa0.54□□□□□ -2.32
CFTR-207ENST00000546407 KALRNO60229 2985 aa0.54□□□□□ -2.32
CFTR-207ENST00000546407 NOTCH1P46531 2555 aa0.53□□□□□ -2.32
CFTR-207ENST00000546407 ZANQ9Y493 2812 aa0.53□□□□□ -2.32
CFTR-207ENST00000546407 TACC2O95359 2948 aa0.53□□□□□ -2.32
CFTR-207ENST00000546407 KRTAP9-6A8MVA2 160 aa0.53□□□□□ -2.32
CFTR-207ENST00000546407 KRTAP5-5Q701N2 237 aaPredicted RBP0.53□□□□□ -2.32
CFTR-207ENST00000546407 ANKRD11Q6UB99 2663 aaPredicted RBP0.53□□□□□ -2.32
CFTR-207ENST00000546407 CSMD1Q96PZ7 3565 aa0.52□□□□□ -2.33
CFTR-207ENST00000546407 SMG1Q96Q15 3661 aaKnown RBP0.52□□□□□ -2.33
CFTR-207ENST00000546407 GOLGB1Q14789 3259 aaKnown RBP0.52□□□□□ -2.33
CFTR-207ENST00000546407 MXRA5Q9NR99 2828 aa0.52□□□□□ -2.33
CFTR-207ENST00000546407 OBSCNQ5VST9 7968 aa0.52□□□□□ -2.33
CFTR-207ENST00000546407 FLGP20930 4061 aaPredicted RBP0.52□□□□□ -2.33
CFTR-207ENST00000546407 HECTD4Q9Y4D8 3996 aa0.51□□□□□ -2.33
CFTR-207ENST00000546407 KRTAP4-3Q9BYR4 195 aa0.51□□□□□ -2.33
CFTR-207ENST00000546407 LPAP08519 4548 aa0.51□□□□□ -2.33
CFTR-207ENST00000546407 CUBNO60494 3623 aa0.51□□□□□ -2.33
CFTR-207ENST00000546407 IGSF10Q6WRI0 2623 aa0.51□□□□□ -2.33
CFTR-207ENST00000546407 MGAM2Q2M2H8 2515 aa0.5□□□□□ -2.33
CFTR-207ENST00000546407 DYNC1H1Q14204 4646 aaKnown RBP0.5□□□□□ -2.33
CFTR-207ENST00000546407 RELNP78509 3460 aa0.5□□□□□ -2.33
CFTR-207ENST00000546407 LAMA1P25391 3075 aa0.5□□□□□ -2.33
CFTR-207ENST00000546407 MUC17Q685J3 4493 aa0.5□□□□□ -2.33
CFTR-207ENST00000546407 FBN2P35556 2912 aa0.5□□□□□ -2.33
CFTR-207ENST00000546407 SPRR2BP35325 72 aa0.5□□□□□ -2.33
CFTR-207ENST00000546407 SPRR2GQ9BYE4 73 aa0.5□□□□□ -2.33
CFTR-207ENST00000546407 VPS13CQ709C8 3753 aa0.5□□□□□ -2.33
CFTR-207ENST00000546407 SPEGQ15772 3267 aa0.5□□□□□ -2.33
CFTR-207ENST00000546407 FBN3Q75N90 2809 aa0.5□□□□□ -2.33
CFTR-207ENST00000546407 PKHD1P08F94 4074 aa0.49□□□□□ -2.33
CFTR-207ENST00000546407 DNAH5Q8TE73 4624 aa0.49□□□□□ -2.33
CFTR-207ENST00000546407 USP34Q70CQ2 3546 aa0.49□□□□□ -2.33
CFTR-207ENST00000546407 UTRNP46939 3433 aa0.49□□□□□ -2.33
CFTR-207ENST00000546407 TENM3Q9P273 2699 aa0.49□□□□□ -2.33
CFTR-207ENST00000546407 KRTAP5-8O75690 187 aa0.49□□□□□ -2.33
CFTR-207ENST00000546407 MT1EP04732 61 aa0.49□□□□□ -2.33
CFTR-207ENST00000546407 SPRR2DP22532 72 aa0.49□□□□□ -2.33
CFTR-207ENST00000546407 SPRR2AP35326 72 aa0.49□□□□□ -2.33
CFTR-207ENST00000546407 KRTAP19-3Q7Z4W3 81 aa0.49□□□□□ -2.33
CFTR-207ENST00000546407 LRP1Q07954 4544 aaKnown RBP0.49□□□□□ -2.33
CFTR-207ENST00000546407 TENM1Q9UKZ4 2725 aa0.49□□□□□ -2.33
CFTR-207ENST00000546407 ASPMQ8IZT6 3477 aa0.48□□□□□ -2.33
CFTR-207ENST00000546407 CENPFP49454 3210 aa0.48□□□□□ -2.33
CFTR-207ENST00000546407 LCE1CQ5T751 118 aa0.48□□□□□ -2.33
CFTR-207ENST00000546407 LCE1BQ5T7P3 118 aa0.48□□□□□ -2.33
CFTR-207ENST00000546407 DCHS1Q96JQ0 3298 aa0.48□□□□□ -2.33
CFTR-207ENST00000546407 KRTAP6-2Q3LI66 62 aa0.47□□□□□ -2.33
CFTR-207ENST00000546407 MT1LQ93083 61 aa0.47□□□□□ -2.33
CFTR-207ENST00000546407 PCNTO95613 3336 aa0.47□□□□□ -2.33
CFTR-207ENST00000546407 HRNRQ86YZ3 2850 aaPredicted RBP0.47□□□□□ -2.33
CFTR-207ENST00000546407 ADGRG4Q8IZF6 3080 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms