RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 ATP5EP2Q5VTU8 51 aa10.04□□□□□ -0.8
CHD4-214ENST00000545942 CRIPTQ9P021 101 aa10.03□□□□□ -0.8
CHD4-214ENST00000545942 FAM240AA0A1B0GVK7 77 aa10.01□□□□□ -0.81
CHD4-214ENST00000545942 UQCRQO14949 82 aa10□□□□□ -0.81
CHD4-214ENST00000545942 HIST1H4AP62805 103 aaKnown RBP10□□□□□ -0.81
CHD4-214ENST00000545942 ATOX1O00244 68 aa9.98□□□□□ -0.81
CHD4-214ENST00000545942 IMUPQ9GZP8 106 aa9.98□□□□□ -0.81
CHD4-214ENST00000545942 H0Y9P7 68 aa9.96□□□□□ -0.82
CHD4-214ENST00000545942 NDUFC1O43677 76 aa9.94□□□□□ -0.82
CHD4-214ENST00000545942 NEBP20929 6669 aa9.91□□□□□ -0.82
CHD4-214ENST00000545942 H0YAA0 97 aa9.9□□□□□ -0.82
CHD4-214ENST00000545942 MUC12Q9UKN1 5478 aa9.89□□□□□ -0.83
CHD4-214ENST00000545942 A8MUN3 132 aa9.85□□□□□ -0.83
CHD4-214ENST00000545942 LINC00643Q86TS7 51 aa9.82□□□□□ -0.84
CHD4-214ENST00000545942 LINC00208Q96KT6 92 aa9.8□□□□□ -0.84
CHD4-214ENST00000545942 ADM2Q7Z4H4 148 aa9.78□□□□□ -0.84
CHD4-214ENST00000545942 KRTAP5-9P26371 169 aa9.77□□□□□ -0.85
CHD4-214ENST00000545942 MP68P56378 58 aa9.72□□□□□ -0.85
CHD4-214ENST00000545942 OCR1Q9BZK8 76 aa9.7□□□□□ -0.86
CHD4-214ENST00000545942 KMT2DO14686 5537 aa9.66□□□□□ -0.86
CHD4-214ENST00000545942 PRO2289Q9P1D8 64 aa9.62□□□□□ -0.87
CHD4-214ENST00000545942 KRTAP20-1Q3LI63 56 aa9.61□□□□□ -0.87
CHD4-214ENST00000545942 MDN1Q9NU22 5596 aa9.6□□□□□ -0.87
CHD4-214ENST00000545942 PLAC4Q8WY50 150 aa9.57□□□□□ -0.88
CHD4-214ENST00000545942 R4GN34 69 aa9.56□□□□□ -0.88
CHD4-214ENST00000545942 H3BPC8 53 aa9.56□□□□□ -0.88
CHD4-214ENST00000545942 MT1XP80297 61 aa9.56□□□□□ -0.88
CHD4-214ENST00000545942 C20orf197Q8N268 126 aa9.54□□□□□ -0.88
CHD4-214ENST00000545942 P0C880 135 aa9.53□□□□□ -0.88
CHD4-214ENST00000545942 A0A1B0GV90 55 aa9.52□□□□□ -0.89
CHD4-214ENST00000545942 DMAC1Q96GE9 116 aa9.51□□□□□ -0.89
CHD4-214ENST00000545942 M0QZ58 72 aa9.46□□□□□ -0.9
CHD4-214ENST00000545942 SCGB1A1P11684 91 aa9.45□□□□□ -0.9
CHD4-214ENST00000545942 SPRR2FQ96RM1 72 aa9.45□□□□□ -0.9
CHD4-214ENST00000545942 J3QR89 54 aa9.44□□□□□ -0.9
CHD4-214ENST00000545942 KRTAP3-2Q9BYR7 98 aa9.39□□□□□ -0.91
CHD4-214ENST00000545942 KRTAP8-1Q8IUC2 63 aa9.37□□□□□ -0.91
CHD4-214ENST00000545942 KRTAP12-2P59991 146 aa9.36□□□□□ -0.91
CHD4-214ENST00000545942 SPRR2EP22531 72 aa9.34□□□□□ -0.91
CHD4-214ENST00000545942 SPRR2BP35325 72 aa9.34□□□□□ -0.91
CHD4-214ENST00000545942 SPRR2AP35326 72 aa9.34□□□□□ -0.91
CHD4-214ENST00000545942 LINC01554Q52M75 96 aa9.34□□□□□ -0.91
CHD4-214ENST00000545942 KRTAP2-3P0C7H8 128 aa9.32□□□□□ -0.92
CHD4-214ENST00000545942 KRTAP2-4Q9BYR9 128 aa9.32□□□□□ -0.92
CHD4-214ENST00000545942 TRAV7A0A075B6U4 112 aa9.31□□□□□ -0.92
CHD4-214ENST00000545942 ACYP2P14621 99 aa9.26□□□□□ -0.93
CHD4-214ENST00000545942 LCE1AQ5T7P2 110 aa9.2□□□□□ -0.94
CHD4-214ENST00000545942 KRTAP4-8A0A0G2JLE6 195 aa9.19□□□□□ -0.94
CHD4-214ENST00000545942 SPTSSBQ8NFR3 76 aa9.19□□□□□ -0.94
CHD4-214ENST00000545942 KRTAP4-8Q9BYQ9 185 aa9.19□□□□□ -0.94
CHD4-214ENST00000545942 SMIM20Q8N5G0 67 aa9.15□□□□□ -0.94
CHD4-214ENST00000545942 MT-ATP8P03928 68 aa9.13□□□□□ -0.95
CHD4-214ENST00000545942 KRTAP10-7P60409 375 aaPredicted RBP9.11□□□□□ -0.95
CHD4-214ENST00000545942 CHKB-CPT1BH3BT56 60 aa9.08□□□□□ -0.96
CHD4-214ENST00000545942 KRTAP10-12P60413 245 aa9.07□□□□□ -0.96
CHD4-214ENST00000545942 SPRR2DP22532 72 aa9.04□□□□□ -0.96
CHD4-214ENST00000545942 KRTAP2-2Q9BYT5 123 aa9.03□□□□□ -0.96
CHD4-214ENST00000545942 KRTAP2-1Q9BYU5 128 aa9.03□□□□□ -0.96
CHD4-214ENST00000545942 K7ERU9 68 aa8.99□□□□□ -0.97
CHD4-214ENST00000545942 SNURFQ9Y675 71 aa8.97□□□□□ -0.97
CHD4-214ENST00000545942 SPANXA2-OT1Q8N9U9 137 aa8.9□□□□□ -0.98
CHD4-214ENST00000545942 KRTAP13-4Q3LI77 160 aa8.82□□□□□ -1
CHD4-214ENST00000545942 LCE3BQ5TA77 95 aa8.8□□□□□ -1
CHD4-214ENST00000545942 CAMK2N1Q7Z7J9 78 aa8.77□□□□□ -1.01
CHD4-214ENST00000545942 SERP2Q8N6R1 65 aa8.77□□□□□ -1.01
CHD4-214ENST00000545942 COA5Q86WW8 74 aa8.65□□□□□ -1.02
CHD4-214ENST00000545942 SEC61GP60059 68 aa8.6□□□□□ -1.03
CHD4-214ENST00000545942 SERP1Q9Y6X1 66 aa8.57□□□□□ -1.04
CHD4-214ENST00000545942 A0A0D9SG42 100 aa8.55□□□□□ -1.04
CHD4-214ENST00000545942 KRTAP19-7Q3SYF9 63 aa8.54□□□□□ -1.04
CHD4-214ENST00000545942 LCE5AQ5TCM9 118 aa8.5□□□□□ -1.05
CHD4-214ENST00000545942 MT1EP04732 61 aa8.49□□□□□ -1.05
CHD4-214ENST00000545942 SPATA8Q6RVD6 105 aa8.49□□□□□ -1.05
CHD4-214ENST00000545942 DSTQ03001 7570 aaKnown RBP8.45□□□□□ -1.06
CHD4-214ENST00000545942 A0A1B0GU33 70 aa8.45□□□□□ -1.06
CHD4-214ENST00000545942 SPINT4Q6UDR6 99 aa8.45□□□□□ -1.06
CHD4-214ENST00000545942 KRTAP19-3Q7Z4W3 81 aa8.45□□□□□ -1.06
CHD4-214ENST00000545942 COX7CP15954 63 aa8.43□□□□□ -1.06
CHD4-214ENST00000545942 KRTAP12-1P59990 96 aa8.36□□□□□ -1.07
CHD4-214ENST00000545942 H7BZZ5 65 aa8.35□□□□□ -1.07
CHD4-214ENST00000545942 CYSTM1Q9H1C7 97 aa8.32□□□□□ -1.08
CHD4-214ENST00000545942 KRTAP19-5Q3LI72 72 aa8.29□□□□□ -1.08
CHD4-214ENST00000545942 MT1GP13640 62 aa8.24□□□□□ -1.09
CHD4-214ENST00000545942 SMIM26A0A096LP01 95 aa8.23□□□□□ -1.09
CHD4-214ENST00000545942 A0A1B0GU69 56 aa8.23□□□□□ -1.09
CHD4-214ENST00000545942 KRTAP4-9Q9BYQ8 210 aa8.22□□□□□ -1.09
CHD4-214ENST00000545942 PP632Q6XCG6 107 aa8.18□□□□□ -1.1
CHD4-214ENST00000545942 GPR98Q8WXG9 6306 aa8.15□□□□□ -1.1
CHD4-214ENST00000545942 A8MU10 97 aa8.13□□□□□ -1.11
CHD4-214ENST00000545942 MT1MQ8N339 61 aa8.08□□□□□ -1.12
CHD4-214ENST00000545942 MT1LQ93083 61 aa8.08□□□□□ -1.12
CHD4-214ENST00000545942 TNP1P09430 55 aa8.03□□□□□ -1.12
CHD4-214ENST00000545942 ANAPC13Q9BS18 74 aa8.03□□□□□ -1.12
CHD4-214ENST00000545942 LCE3AQ5TA76 89 aa8.03□□□□□ -1.12
CHD4-214ENST00000545942 LCE1DQ5T752 114 aa8.02□□□□□ -1.13
CHD4-214ENST00000545942 C10orf95Q9H7T3 257 aa8.02□□□□□ -1.13
CHD4-214ENST00000545942 LCE4AQ5TA78 99 aa7.99□□□□□ -1.13
CHD4-214ENST00000545942 PRR15LQ9BU68 103 aa7.94□□□□□ -1.14
CHD4-214ENST00000545942 MT4P47944 62 aa7.91□□□□□ -1.14
CHD4-214ENST00000545942 KRTAP4-3Q9BYR4 195 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms