RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 H0YAA0 97 aa6.98□□□□□ -1.29
CPSF7-225ENST00000545934 C9orf118A6NHY6 69 aa6.97□□□□□ -1.29
CPSF7-225ENST00000545934 TMA7Q9Y2S6 64 aaKnown RBP6.97□□□□□ -1.29
CPSF7-225ENST00000545934 A0A1W2PPM0 123 aa6.96□□□□□ -1.3
CPSF7-225ENST00000545934 KRTAP12-2P59991 146 aa6.95□□□□□ -1.3
CPSF7-225ENST00000545934 CYP4F30PQ9H0H9 118 aa6.95□□□□□ -1.3
CPSF7-225ENST00000545934 UBL5Q9BZL1 73 aa6.94□□□□□ -1.3
CPSF7-225ENST00000545934 TAX1BP3O14907 124 aa6.92□□□□□ -1.3
CPSF7-225ENST00000545934 SPRR2DP22532 72 aa6.92□□□□□ -1.3
CPSF7-225ENST00000545934 BATFQ16520 125 aa6.92□□□□□ -1.3
CPSF7-225ENST00000545934 A8MUN3 132 aa6.89□□□□□ -1.31
CPSF7-225ENST00000545934 KRTAP4-8A0A0G2JLE6 195 aa6.85□□□□□ -1.31
CPSF7-225ENST00000545934 NDUFC1O43677 76 aa6.85□□□□□ -1.31
CPSF7-225ENST00000545934 KRTAP4-8Q9BYQ9 185 aa6.85□□□□□ -1.31
CPSF7-225ENST00000545934 ADM2Q7Z4H4 148 aa6.83□□□□□ -1.32
CPSF7-225ENST00000545934 PLAC4Q8WY50 150 aa6.83□□□□□ -1.32
CPSF7-225ENST00000545934 LOC101927531A0A1B0GV80 90 aa6.82□□□□□ -1.32
CPSF7-225ENST00000545934 SMIM6P0DI80 62 aa6.82□□□□□ -1.32
CPSF7-225ENST00000545934 SPCS1Q9Y6A9 102 aa6.8□□□□□ -1.32
CPSF7-225ENST00000545934 TRAV22A0A0B4J277 110 aa6.79□□□□□ -1.32
CPSF7-225ENST00000545934 K7EP34 96 aa6.79□□□□□ -1.32
CPSF7-225ENST00000545934 LCE3BQ5TA77 95 aa6.79□□□□□ -1.32
CPSF7-225ENST00000545934 PRO0461Q9UI25 63 aa6.78□□□□□ -1.32
CPSF7-225ENST00000545934 GPR98Q8WXG9 6306 aa6.74□□□□□ -1.33
CPSF7-225ENST00000545934 ACYP1P07311 99 aa6.69□□□□□ -1.34
CPSF7-225ENST00000545934 KRTAP10-7P60409 375 aaPredicted RBP6.68□□□□□ -1.34
CPSF7-225ENST00000545934 KRTAP10-12P60413 245 aa6.68□□□□□ -1.34
CPSF7-225ENST00000545934 R4GN34 69 aa6.68□□□□□ -1.34
CPSF7-225ENST00000545934 P0C880 135 aa6.66□□□□□ -1.34
CPSF7-225ENST00000545934 H0Y9P7 68 aa6.62□□□□□ -1.35
CPSF7-225ENST00000545934 ATOX1O00244 68 aa6.62□□□□□ -1.35
CPSF7-225ENST00000545934 M0QZ58 72 aa6.61□□□□□ -1.35
CPSF7-225ENST00000545934 UQCRQO14949 82 aa6.61□□□□□ -1.35
CPSF7-225ENST00000545934 C20orf197Q8N268 126 aa6.58□□□□□ -1.36
CPSF7-225ENST00000545934 KRTAP3-2Q9BYR7 98 aa6.56□□□□□ -1.36
CPSF7-225ENST00000545934 DSTQ03001 7570 aaKnown RBP6.54□□□□□ -1.36
CPSF7-225ENST00000545934 ETDBQ3ZM63 59 aa6.51□□□□□ -1.37
CPSF7-225ENST00000545934 LINC01554Q52M75 96 aa6.51□□□□□ -1.37
CPSF7-225ENST00000545934 COL5A1-AS1Q5SY13 56 aa6.51□□□□□ -1.37
CPSF7-225ENST00000545934 F8W1H4 67 aa6.48□□□□□ -1.37
CPSF7-225ENST00000545934 LINC00208Q96KT6 92 aa6.47□□□□□ -1.37
CPSF7-225ENST00000545934 ATP5EP2Q5VTU8 51 aa6.45□□□□□ -1.38
CPSF7-225ENST00000545934 HIST1H4AP62805 103 aaKnown RBP6.44□□□□□ -1.38
CPSF7-225ENST00000545934 GTF2H5Q6ZYL4 71 aa6.43□□□□□ -1.38
CPSF7-225ENST00000545934 LOC105371267A0A1B0GV96 52 aa6.42□□□□□ -1.38
CPSF7-225ENST00000545934 KRTAP4-9Q9BYQ8 210 aa6.42□□□□□ -1.38
CPSF7-225ENST00000545934 LCE5AQ5TCM9 118 aa6.38□□□□□ -1.39
CPSF7-225ENST00000545934 DMAC1Q96GE9 116 aa6.37□□□□□ -1.39
CPSF7-225ENST00000545934 FAM240AA0A1B0GVK7 77 aa6.36□□□□□ -1.39
CPSF7-225ENST00000545934 OCR1Q9BZK8 76 aa6.36□□□□□ -1.39
CPSF7-225ENST00000545934 MP68P56378 58 aa6.35□□□□□ -1.39
CPSF7-225ENST00000545934 KRTAP19-7Q3SYF9 63 aa6.31□□□□□ -1.4
CPSF7-225ENST00000545934 MT-ATP8P03928 68 aa6.28□□□□□ -1.4
CPSF7-225ENST00000545934 KRTAP19-3Q7Z4W3 81 aa6.27□□□□□ -1.41
CPSF7-225ENST00000545934 MT1EP04732 61 aa6.25□□□□□ -1.41
CPSF7-225ENST00000545934 H3BPC8 53 aa6.24□□□□□ -1.41
CPSF7-225ENST00000545934 LCE1DQ5T752 114 aa6.24□□□□□ -1.41
CPSF7-225ENST00000545934 LINC00643Q86TS7 51 aa6.23□□□□□ -1.41
CPSF7-225ENST00000545934 HMCN1Q96RW7 5635 aa6.23□□□□□ -1.41
CPSF7-225ENST00000545934 TRAV7A0A075B6U4 112 aa6.21□□□□□ -1.42
CPSF7-225ENST00000545934 AHNAK2Q8IVF2 5795 aa6.18□□□□□ -1.42
CPSF7-225ENST00000545934 LCE4AQ5TA78 99 aa6.13□□□□□ -1.43
CPSF7-225ENST00000545934 CYSTM1Q9H1C7 97 aa6.13□□□□□ -1.43
CPSF7-225ENST00000545934 ACYP2P14621 99 aa6.09□□□□□ -1.43
CPSF7-225ENST00000545934 MT1GP13640 62 aa6.08□□□□□ -1.44
CPSF7-225ENST00000545934 MT4P47944 62 aa6.08□□□□□ -1.44
CPSF7-225ENST00000545934 SPTSSBQ8NFR3 76 aa6.08□□□□□ -1.44
CPSF7-225ENST00000545934 KRTAP13-4Q3LI77 160 aa6.07□□□□□ -1.44
CPSF7-225ENST00000545934 CAMK2N1Q7Z7J9 78 aa6.05□□□□□ -1.44
CPSF7-225ENST00000545934 KRTAP5-10Q6L8G5 202 aa6.03□□□□□ -1.44
CPSF7-225ENST00000545934 KRTAP19-5Q3LI72 72 aa5.99□□□□□ -1.45
CPSF7-225ENST00000545934 PP632Q6XCG6 107 aa5.99□□□□□ -1.45
CPSF7-225ENST00000545934 KRTAP5-4Q6L8H1 288 aa5.98□□□□□ -1.45
CPSF7-225ENST00000545934 MT1MQ8N339 61 aa5.98□□□□□ -1.45
CPSF7-225ENST00000545934 PCP4L1A6NKN8 68 aa5.96□□□□□ -1.46
CPSF7-225ENST00000545934 SCGB1A1P11684 91 aa5.95□□□□□ -1.46
CPSF7-225ENST00000545934 A0A0D9SG42 100 aa5.94□□□□□ -1.46
CPSF7-225ENST00000545934 CHKB-CPT1BH3BT56 60 aa5.93□□□□□ -1.46
CPSF7-225ENST00000545934 KRTAP4-6Q9BYQ5 205 aa5.91□□□□□ -1.46
CPSF7-225ENST00000545934 MT1LQ93083 61 aa5.89□□□□□ -1.47
CPSF7-225ENST00000545934 KRTAP5-7Q6L8G8 165 aa5.86□□□□□ -1.47
CPSF7-225ENST00000545934 KRTAP4-3Q9BYR4 195 aa5.85□□□□□ -1.47
CPSF7-225ENST00000545934 KRTAP5-3Q6L8H2 238 aa5.79□□□□□ -1.48
CPSF7-225ENST00000545934 SMIM20Q8N5G0 67 aa5.73□□□□□ -1.49
CPSF7-225ENST00000545934 SPANXA2-OT1Q8N9U9 137 aa5.71□□□□□ -1.5
CPSF7-225ENST00000545934 J3QR89 54 aa5.69□□□□□ -1.5
CPSF7-225ENST00000545934 KRTAP12-1P59990 96 aa5.69□□□□□ -1.5
CPSF7-225ENST00000545934 SPINT4Q6UDR6 99 aa5.69□□□□□ -1.5
CPSF7-225ENST00000545934 SPATA8Q6RVD6 105 aa5.68□□□□□ -1.5
CPSF7-225ENST00000545934 SNURFQ9Y675 71 aa5.68□□□□□ -1.5
CPSF7-225ENST00000545934 C10orf95Q9H7T3 257 aa5.67□□□□□ -1.5
CPSF7-225ENST00000545934 A0A1B0GV90 55 aa5.64□□□□□ -1.51
CPSF7-225ENST00000545934 KRTAP20-2Q3LI61 65 aa5.64□□□□□ -1.51
CPSF7-225ENST00000545934 LCE3AQ5TA76 89 aa5.64□□□□□ -1.51
CPSF7-225ENST00000545934 SPRR5A0A1B0GTR4 108 aa5.58□□□□□ -1.52
CPSF7-225ENST00000545934 KRTAP4-7Q9BYR0 210 aa5.58□□□□□ -1.52
CPSF7-225ENST00000545934 SERP1Q9Y6X1 66 aa5.58□□□□□ -1.52
CPSF7-225ENST00000545934 KRTAP5-5Q701N2 237 aaPredicted RBP5.57□□□□□ -1.52
CPSF7-225ENST00000545934 A0A1B0GU33 70 aa5.56□□□□□ -1.52
CPSF7-225ENST00000545934 SEC61GP60059 68 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms