RNA–Protein interactions for RNA: ENST00000545067.6

CCDC7-210, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 4,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-210ENST00000545067 KRTAP21-3Q3LHN1 58 aa4.49□□□□□ -1.69
CCDC7-210ENST00000545067 R4GN34 69 aa4.48□□□□□ -1.69
CCDC7-210ENST00000545067 P0C880 135 aa4.48□□□□□ -1.69
CCDC7-210ENST00000545067 M0QZ58 72 aa4.47□□□□□ -1.69
CCDC7-210ENST00000545067 KRTAP10-8P60410 259 aa4.47□□□□□ -1.69
CCDC7-210ENST00000545067 C10orf95Q9H7T3 257 aa4.46□□□□□ -1.7
CCDC7-210ENST00000545067 H3BS24 57 aa4.45□□□□□ -1.7
CCDC7-210ENST00000545067 LCE2BO14633 110 aa4.44□□□□□ -1.7
CCDC7-210ENST00000545067 PKHD1P08F94 4074 aa4.44□□□□□ -1.7
CCDC7-210ENST00000545067 KRTAP10-4P60372 401 aaPredicted RBP4.42□□□□□ -1.7
CCDC7-210ENST00000545067 CAMK2N1Q7Z7J9 78 aa4.4□□□□□ -1.71
CCDC7-210ENST00000545067 LRP1Q07954 4544 aaKnown RBP4.39□□□□□ -1.71
CCDC7-210ENST00000545067 SEC61BP60468 96 aaKnown RBP4.39□□□□□ -1.71
CCDC7-210ENST00000545067 ALMS1Q8TCU4 4167 aa4.37□□□□□ -1.71
CCDC7-210ENST00000545067 KRTAP13-4Q3LI77 160 aa4.37□□□□□ -1.71
CCDC7-210ENST00000545067 FAT3Q8TDW7 4589 aa4.36□□□□□ -1.71
CCDC7-210ENST00000545067 SACSQ9NZJ4 4579 aa4.36□□□□□ -1.71
CCDC7-210ENST00000545067 KIAA1109Q2LD37 5005 aa4.36□□□□□ -1.71
CCDC7-210ENST00000545067 APOBP04114 4563 aaKnown RBP4.33□□□□□ -1.72
CCDC7-210ENST00000545067 KRTAP10-6P60371 365 aaPredicted RBP4.33□□□□□ -1.72
CCDC7-210ENST00000545067 RYR1P21817 5038 aa4.32□□□□□ -1.72
CCDC7-210ENST00000545067 KRTAP12-2P59991 146 aa4.3□□□□□ -1.72
CCDC7-210ENST00000545067 FAT2Q9NYQ8 4349 aa4.3□□□□□ -1.72
CCDC7-210ENST00000545067 M0R2T5 61 aa4.3□□□□□ -1.72
CCDC7-210ENST00000545067 LCE2AQ5TA79 106 aaPredicted RBP4.28□□□□□ -1.72
CCDC7-210ENST00000545067 KMT2CQ8NEZ4 4911 aaKnown RBP4.28□□□□□ -1.72
CCDC7-210ENST00000545067 MT1HL1P0DM35 61 aa4.28□□□□□ -1.72
CCDC7-210ENST00000545067 TPRXLQ17RH7 258 aa4.28□□□□□ -1.72
CCDC7-210ENST00000545067 RYR3Q15413 4870 aa4.26□□□□□ -1.73
CCDC7-210ENST00000545067 KRTAP4-5Q9BYR2 181 aa4.25□□□□□ -1.73
CCDC7-210ENST00000545067 NDUFAF8A1L188 74 aa4.25□□□□□ -1.73
CCDC7-210ENST00000545067 PKD1P98161 4303 aa4.24□□□□□ -1.73
CCDC7-210ENST00000545067 LCE2CQ5TA81 110 aa4.23□□□□□ -1.73
CCDC7-210ENST00000545067 KRTAP12-1P59990 96 aa4.22□□□□□ -1.73
CCDC7-210ENST00000545067 RYR2Q92736 4967 aa4.19□□□□□ -1.74
CCDC7-210ENST00000545067 KRTAP17-1Q9BYP8 105 aa4.18□□□□□ -1.74
CCDC7-210ENST00000545067 LRP2P98164 4655 aa4.18□□□□□ -1.74
CCDC7-210ENST00000545067 LUZP6Q538Z0 58 aa4.15□□□□□ -1.74
CCDC7-210ENST00000545067 LORP23490 312 aaPredicted RBP4.13□□□□□ -1.75
CCDC7-210ENST00000545067 HSPG2P98160 4391 aa4.12□□□□□ -1.75
CCDC7-210ENST00000545067 PLAC4Q8WY50 150 aa4.05□□□□□ -1.76
CCDC7-210ENST00000545067 LPAP08519 4548 aa4.05□□□□□ -1.76
CCDC7-210ENST00000545067 PKHD1L1Q86WI1 4243 aa4.02□□□□□ -1.77
CCDC7-210ENST00000545067 TNP1P09430 55 aa4.02□□□□□ -1.77
CCDC7-210ENST00000545067 KRTAP4-1Q9BYQ7 146 aa4.01□□□□□ -1.77
CCDC7-210ENST00000545067 EPPK1P58107 5090 aaKnown RBP4□□□□□ -1.77
CCDC7-210ENST00000545067 HERC2O95714 4834 aa3.97□□□□□ -1.77
CCDC7-210ENST00000545067 KRTAP10-10P60014 251 aa3.96□□□□□ -1.78
CCDC7-210ENST00000545067 TNXBP22105 4242 aa3.94□□□□□ -1.78
CCDC7-210ENST00000545067 ABCA13Q86UQ4 5058 aa3.94□□□□□ -1.78
CCDC7-210ENST00000545067 KRTAP15-1Q3LI76 137 aa3.91□□□□□ -1.78
CCDC7-210ENST00000545067 PP632Q6XCG6 107 aa3.9□□□□□ -1.78
CCDC7-210ENST00000545067 MUC2Q02817 5179 aa3.9□□□□□ -1.79
CCDC7-210ENST00000545067 A0A0A0MQY5 61 aa3.89□□□□□ -1.79
CCDC7-210ENST00000545067 HERC1Q15751 4861 aa3.76□□□□□ -1.81
CCDC7-210ENST00000545067 FAT4Q6V0I7 4981 aa3.76□□□□□ -1.81
CCDC7-210ENST00000545067 RNF213Q63HN8 5207 aa3.75□□□□□ -1.81
CCDC7-210ENST00000545067 PCLOQ9Y6V0 5065 aa3.67□□□□□ -1.82
CCDC7-210ENST00000545067 BIRC6Q9NR09 4857 aa3.65□□□□□ -1.82
CCDC7-210ENST00000545067 LCE3AQ5TA76 89 aa3.65□□□□□ -1.83
CCDC7-210ENST00000545067 UBR4Q5T4S7 5183 aa3.62□□□□□ -1.83
CCDC7-210ENST00000545067 MT1HP80294 61 aa3.62□□□□□ -1.83
CCDC7-210ENST00000545067 MUC17Q685J3 4493 aa3.61□□□□□ -1.83
CCDC7-210ENST00000545067 KRTAP19-2Q3LHN2 52 aa3.6□□□□□ -1.83
CCDC7-210ENST00000545067 MT1FP04733 61 aa3.59□□□□□ -1.83
CCDC7-210ENST00000545067 MT2AP02795 61 aa3.59□□□□□ -1.84
CCDC7-210ENST00000545067 PRO2289Q9P1D8 64 aa3.59□□□□□ -1.84
CCDC7-210ENST00000545067 KRTAP19-1Q8IUB9 90 aa3.56□□□□□ -1.84
CCDC7-210ENST00000545067 FLGP20930 4061 aaPredicted RBP3.55□□□□□ -1.84
CCDC7-210ENST00000545067 KRTAP10-12P60413 245 aa3.55□□□□□ -1.84
CCDC7-210ENST00000545067 SPRR2GQ9BYE4 73 aa3.55□□□□□ -1.84
CCDC7-210ENST00000545067 HMCN2Q8NDA2 5059 aa3.51□□□□□ -1.85
CCDC7-210ENST00000545067 KRTAP12-3P60328 96 aa3.51□□□□□ -1.85
CCDC7-210ENST00000545067 FSIP2Q5CZC0 6907 aa3.48□□□□□ -1.85
CCDC7-210ENST00000545067 KRTAP23-1A1A580 65 aa3.46□□□□□ -1.86
CCDC7-210ENST00000545067 KRTAP9-8Q9BYQ0 159 aa3.43□□□□□ -1.86
CCDC7-210ENST00000545067 LOC100996750A0A140TA64 210 aa3.42□□□□□ -1.86
CCDC7-210ENST00000545067 KRTAP4-6Q9BYQ5 205 aa3.42□□□□□ -1.86
CCDC7-210ENST00000545067 KRTAP10-7P60409 375 aaPredicted RBP3.39□□□□□ -1.87
CCDC7-210ENST00000545067 MT1BP07438 61 aa3.37□□□□□ -1.87
CCDC7-210ENST00000545067 MT1XP80297 61 aa3.37□□□□□ -1.87
CCDC7-210ENST00000545067 USH2AO75445 5202 aa3.36□□□□□ -1.87
CCDC7-210ENST00000545067 KRTAP10-5P60370 271 aa3.35□□□□□ -1.87
CCDC7-210ENST00000545067 KRTAP8-1Q8IUC2 63 aa3.35□□□□□ -1.87
CCDC7-210ENST00000545067 KRTAP19-8Q3LI54 63 aa3.34□□□□□ -1.88
CCDC7-210ENST00000545067 KRTAP19-5Q3LI72 72 aa3.31□□□□□ -1.88
CCDC7-210ENST00000545067 CRCT1Q9UGL9 99 aa3.3□□□□□ -1.88
CCDC7-210ENST00000545067 KRTAP4-8A0A0G2JLE6 195 aa3.28□□□□□ -1.88
CCDC7-210ENST00000545067 KRTAP4-8Q9BYQ9 185 aa3.28□□□□□ -1.88
CCDC7-210ENST00000545067 KRTAP9-3Q9BYQ3 159 aa3.28□□□□□ -1.88
CCDC7-210ENST00000545067 KMT2DO14686 5537 aa3.27□□□□□ -1.89
CCDC7-210ENST00000545067 SPRR5A0A1B0GTR4 108 aa3.26□□□□□ -1.89
CCDC7-210ENST00000545067 KRTAP4-12Q9BQ66 201 aa3.23□□□□□ -1.89
CCDC7-210ENST00000545067 LCE3CQ5T5A8 94 aa3.18□□□□□ -1.9
CCDC7-210ENST00000545067 INE1O15225 51 aa3.18□□□□□ -1.9
CCDC7-210ENST00000545067 KRTAP4-7Q9BYR0 210 aa3.16□□□□□ -1.9
CCDC7-210ENST00000545067 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
CCDC7-210ENST00000545067 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.13□□□□□ -1.91
CCDC7-210ENST00000545067 KRTAP9-2Q9BYQ4 174 aa3.12□□□□□ -1.91
CCDC7-210ENST00000545067 DSTQ03001 7570 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms