RNA–Protein interactions for RNA: ENST00000544724.5

PSMD9-211, Transcript of proteasome 26S subunit, non-ATPase 9, humanhuman

TSL 2

Gene PSMD9, Length 3,051 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD9-211ENST00000544724 K7ERS5 55 aa4.92□□□□□ -1.62
PSMD9-211ENST00000544724 HSPG2P98160 4391 aa4.91□□□□□ -1.62
PSMD9-211ENST00000544724 KRTAP10-8P60410 259 aa4.89□□□□□ -1.63
PSMD9-211ENST00000544724 TPRXLQ17RH7 258 aa4.89□□□□□ -1.63
PSMD9-211ENST00000544724 SPINT4Q6UDR6 99 aa4.88□□□□□ -1.63
PSMD9-211ENST00000544724 KRTAP10-6P60371 365 aaPredicted RBP4.88□□□□□ -1.63
PSMD9-211ENST00000544724 APOBP04114 4563 aaKnown RBP4.87□□□□□ -1.63
PSMD9-211ENST00000544724 LPAP08519 4548 aa4.86□□□□□ -1.63
PSMD9-211ENST00000544724 KRTAP3-3Q9BYR6 98 aa4.86□□□□□ -1.63
PSMD9-211ENST00000544724 PKHD1L1Q86WI1 4243 aa4.85□□□□□ -1.63
PSMD9-211ENST00000544724 RPL37P61927 97 aaKnown RBP4.85□□□□□ -1.63
PSMD9-211ENST00000544724 FAT3Q8TDW7 4589 aa4.83□□□□□ -1.64
PSMD9-211ENST00000544724 KRTAP3-2Q9BYR7 98 aa4.82□□□□□ -1.64
PSMD9-211ENST00000544724 KRTAP10-4P60372 401 aaPredicted RBP4.81□□□□□ -1.64
PSMD9-211ENST00000544724 RPS29P62273 56 aaKnown RBP4.81□□□□□ -1.64
PSMD9-211ENST00000544724 KRTAP12-2P59991 146 aa4.8□□□□□ -1.64
PSMD9-211ENST00000544724 KMT2CQ8NEZ4 4911 aaKnown RBP4.79□□□□□ -1.64
PSMD9-211ENST00000544724 NDUFAF8A1L188 74 aa4.78□□□□□ -1.64
PSMD9-211ENST00000544724 S4R3F8 94 aa4.77□□□□□ -1.65
PSMD9-211ENST00000544724 LRP2P98164 4655 aa4.73□□□□□ -1.65
PSMD9-211ENST00000544724 XP32Q5T750 250 aa4.71□□□□□ -1.65
PSMD9-211ENST00000544724 A0A1B0GVY2 172 aa4.69□□□□□ -1.66
PSMD9-211ENST00000544724 RYR1P21817 5038 aa4.69□□□□□ -1.66
PSMD9-211ENST00000544724 TNXBP22105 4242 aa4.69□□□□□ -1.66
PSMD9-211ENST00000544724 KRTAP12-1P59990 96 aa4.68□□□□□ -1.66
PSMD9-211ENST00000544724 KIAA1109Q2LD37 5005 aa4.67□□□□□ -1.66
PSMD9-211ENST00000544724 KRTAP17-1Q9BYP8 105 aa4.66□□□□□ -1.66
PSMD9-211ENST00000544724 RYR2Q92736 4967 aa4.66□□□□□ -1.66
PSMD9-211ENST00000544724 KRTAP15-1Q3LI76 137 aa4.64□□□□□ -1.67
PSMD9-211ENST00000544724 Q5VSD8 79 aa4.64□□□□□ -1.67
PSMD9-211ENST00000544724 ABCA13Q86UQ4 5058 aa4.61□□□□□ -1.67
PSMD9-211ENST00000544724 KRTAP21-3Q3LHN1 58 aa4.57□□□□□ -1.68
PSMD9-211ENST00000544724 RYR3Q15413 4870 aa4.57□□□□□ -1.68
PSMD9-211ENST00000544724 M0QZ58 72 aa4.57□□□□□ -1.68
PSMD9-211ENST00000544724 LCE2DQ5TA82 110 aaPredicted RBP4.56□□□□□ -1.68
PSMD9-211ENST00000544724 LORP23490 312 aaPredicted RBP4.54□□□□□ -1.68
PSMD9-211ENST00000544724 MUC2Q02817 5179 aa4.51□□□□□ -1.69
PSMD9-211ENST00000544724 SEC61BP60468 96 aaKnown RBP4.5□□□□□ -1.69
PSMD9-211ENST00000544724 R4GN34 69 aa4.5□□□□□ -1.69
PSMD9-211ENST00000544724 EPPK1P58107 5090 aaKnown RBP4.49□□□□□ -1.69
PSMD9-211ENST00000544724 MT1HL1P0DM35 61 aa4.48□□□□□ -1.69
PSMD9-211ENST00000544724 PLAC4Q8WY50 150 aa4.4□□□□□ -1.71
PSMD9-211ENST00000544724 KRTAP4-5Q9BYR2 181 aa4.38□□□□□ -1.71
PSMD9-211ENST00000544724 KRTAP4-1Q9BYQ7 146 aa4.35□□□□□ -1.71
PSMD9-211ENST00000544724 CAMK2N1Q7Z7J9 78 aa4.33□□□□□ -1.72
PSMD9-211ENST00000544724 MUC17Q685J3 4493 aa4.29□□□□□ -1.72
PSMD9-211ENST00000544724 FAT4Q6V0I7 4981 aa4.26□□□□□ -1.73
PSMD9-211ENST00000544724 LUZP6Q538Z0 58 aa4.24□□□□□ -1.73
PSMD9-211ENST00000544724 PCLOQ9Y6V0 5065 aa4.23□□□□□ -1.73
PSMD9-211ENST00000544724 LCE2CQ5TA81 110 aa4.18□□□□□ -1.74
PSMD9-211ENST00000544724 HERC2O95714 4834 aa4.16□□□□□ -1.74
PSMD9-211ENST00000544724 LCE2BO14633 110 aa4.13□□□□□ -1.75
PSMD9-211ENST00000544724 KRTAP19-2Q3LHN2 52 aa4.13□□□□□ -1.75
PSMD9-211ENST00000544724 RNF213Q63HN8 5207 aa4.12□□□□□ -1.75
PSMD9-211ENST00000544724 LCE2AQ5TA79 106 aaPredicted RBP4.12□□□□□ -1.75
PSMD9-211ENST00000544724 HERC1Q15751 4861 aa4.11□□□□□ -1.75
PSMD9-211ENST00000544724 PP632Q6XCG6 107 aa4.08□□□□□ -1.76
PSMD9-211ENST00000544724 TNP1P09430 55 aa4.07□□□□□ -1.76
PSMD9-211ENST00000544724 HMCN2Q8NDA2 5059 aa4.04□□□□□ -1.76
PSMD9-211ENST00000544724 FLGP20930 4061 aaPredicted RBP4.01□□□□□ -1.77
PSMD9-211ENST00000544724 UBR4Q5T4S7 5183 aa3.95□□□□□ -1.78
PSMD9-211ENST00000544724 KRTAP23-1A1A580 65 aa3.95□□□□□ -1.78
PSMD9-211ENST00000544724 M0R2T5 61 aa3.95□□□□□ -1.78
PSMD9-211ENST00000544724 LCE3AQ5TA76 89 aa3.95□□□□□ -1.78
PSMD9-211ENST00000544724 BIRC6Q9NR09 4857 aa3.92□□□□□ -1.78
PSMD9-211ENST00000544724 SPRR5A0A1B0GTR4 108 aa3.89□□□□□ -1.79
PSMD9-211ENST00000544724 KRTAP19-1Q8IUB9 90 aa3.89□□□□□ -1.79
PSMD9-211ENST00000544724 KRTAP10-10P60014 251 aa3.84□□□□□ -1.8
PSMD9-211ENST00000544724 MT1FP04733 61 aa3.8□□□□□ -1.8
PSMD9-211ENST00000544724 KMT2DO14686 5537 aa3.8□□□□□ -1.8
PSMD9-211ENST00000544724 USH2AO75445 5202 aa3.8□□□□□ -1.8
PSMD9-211ENST00000544724 SPRR2GQ9BYE4 73 aa3.8□□□□□ -1.8
PSMD9-211ENST00000544724 MT1HP80294 61 aa3.75□□□□□ -1.81
PSMD9-211ENST00000544724 MT2AP02795 61 aa3.74□□□□□ -1.81
PSMD9-211ENST00000544724 KRTAP10-7P60409 375 aaPredicted RBP3.69□□□□□ -1.82
PSMD9-211ENST00000544724 KRTAP12-3P60328 96 aa3.69□□□□□ -1.82
PSMD9-211ENST00000544724 KRTAP10-5P60370 271 aa3.69□□□□□ -1.82
PSMD9-211ENST00000544724 MT1XP80297 61 aa3.68□□□□□ -1.82
PSMD9-211ENST00000544724 KRTAP9-8Q9BYQ0 159 aa3.67□□□□□ -1.82
PSMD9-211ENST00000544724 KRTAP8-1Q8IUC2 63 aa3.67□□□□□ -1.82
PSMD9-211ENST00000544724 KRTAP10-12P60413 245 aa3.66□□□□□ -1.82
PSMD9-211ENST00000544724 MT1BP07438 61 aa3.65□□□□□ -1.82
PSMD9-211ENST00000544724 PRO2289Q9P1D8 64 aa3.64□□□□□ -1.83
PSMD9-211ENST00000544724 KRTAP19-8Q3LI54 63 aa3.56□□□□□ -1.84
PSMD9-211ENST00000544724 KRTAP19-5Q3LI72 72 aa3.54□□□□□ -1.84
PSMD9-211ENST00000544724 KRTAP4-8A0A0G2JLE6 195 aa3.52□□□□□ -1.85
PSMD9-211ENST00000544724 KRTAP4-8Q9BYQ9 185 aa3.52□□□□□ -1.85
PSMD9-211ENST00000544724 INE1O15225 51 aa3.52□□□□□ -1.85
PSMD9-211ENST00000544724 KRTAP4-7Q9BYR0 210 aa3.5□□□□□ -1.85
PSMD9-211ENST00000544724 FSIP2Q5CZC0 6907 aa3.5□□□□□ -1.85
PSMD9-211ENST00000544724 KRTAP9-3Q9BYQ3 159 aa3.49□□□□□ -1.85
PSMD9-211ENST00000544724 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
PSMD9-211ENST00000544724 LCE3CQ5T5A8 94 aa3.45□□□□□ -1.86
PSMD9-211ENST00000544724 DSTQ03001 7570 aaKnown RBP3.32□□□□□ -1.88
PSMD9-211ENST00000544724 FCGBPQ9Y6R7 5405 aaPredicted RBP3.28□□□□□ -1.88
PSMD9-211ENST00000544724 KRTAP19-7Q3SYF9 63 aa3.28□□□□□ -1.89
PSMD9-211ENST00000544724 MUC12Q9UKN1 5478 aa3.26□□□□□ -1.89
PSMD9-211ENST00000544724 LOC100996750A0A140TA64 210 aa3.25□□□□□ -1.89
PSMD9-211ENST00000544724 CRCT1Q9UGL9 99 aa3.25□□□□□ -1.89
PSMD9-211ENST00000544724 KRTAP4-3Q9BYR4 195 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms