RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 KRTAP13-4Q3LI77 160 aa6.77□□□□□ -1.33
PCMTD1-208ENST00000544451 R4GN34 69 aa6.76□□□□□ -1.33
PCMTD1-208ENST00000544451 DYNC1H1Q14204 4646 aaKnown RBP6.73□□□□□ -1.33
PCMTD1-208ENST00000544451 A0A1B0GVY2 172 aa6.72□□□□□ -1.33
PCMTD1-208ENST00000544451 J3QL48 77 aa6.71□□□□□ -1.34
PCMTD1-208ENST00000544451 NDUFAF8A1L188 74 aa6.7□□□□□ -1.34
PCMTD1-208ENST00000544451 FAT2Q9NYQ8 4349 aa6.68□□□□□ -1.34
PCMTD1-208ENST00000544451 KRTAP10-6P60371 365 aaPredicted RBP6.68□□□□□ -1.34
PCMTD1-208ENST00000544451 LRP1Q07954 4544 aaKnown RBP6.66□□□□□ -1.34
PCMTD1-208ENST00000544451 KRTAP12-2P59991 146 aa6.65□□□□□ -1.34
PCMTD1-208ENST00000544451 TPRXLQ17RH7 258 aa6.65□□□□□ -1.35
PCMTD1-208ENST00000544451 CAMK2N1Q7Z7J9 78 aa6.63□□□□□ -1.35
PCMTD1-208ENST00000544451 KRTAP10-4P60372 401 aaPredicted RBP6.63□□□□□ -1.35
PCMTD1-208ENST00000544451 KRTAP3-3Q9BYR6 98 aa6.61□□□□□ -1.35
PCMTD1-208ENST00000544451 FAT3Q8TDW7 4589 aa6.61□□□□□ -1.35
PCMTD1-208ENST00000544451 SACSQ9NZJ4 4579 aa6.56□□□□□ -1.36
PCMTD1-208ENST00000544451 KRTAP3-2Q9BYR7 98 aa6.55□□□□□ -1.36
PCMTD1-208ENST00000544451 PKD1P98161 4303 aa6.54□□□□□ -1.36
PCMTD1-208ENST00000544451 APOBP04114 4563 aaKnown RBP6.54□□□□□ -1.36
PCMTD1-208ENST00000544451 KRTAP12-1P59990 96 aa6.5□□□□□ -1.37
PCMTD1-208ENST00000544451 SEC61BP60468 96 aaKnown RBP6.47□□□□□ -1.37
PCMTD1-208ENST00000544451 KIAA1109Q2LD37 5005 aa6.45□□□□□ -1.38
PCMTD1-208ENST00000544451 RYR1P21817 5038 aa6.4□□□□□ -1.39
PCMTD1-208ENST00000544451 KMT2CQ8NEZ4 4911 aaKnown RBP6.39□□□□□ -1.39
PCMTD1-208ENST00000544451 LUZP6Q538Z0 58 aa6.39□□□□□ -1.39
PCMTD1-208ENST00000544451 KRTAP21-3Q3LHN1 58 aa6.38□□□□□ -1.39
PCMTD1-208ENST00000544451 MT1HL1P0DM35 61 aa6.37□□□□□ -1.39
PCMTD1-208ENST00000544451 HSPG2P98160 4391 aa6.37□□□□□ -1.39
PCMTD1-208ENST00000544451 LRP2P98164 4655 aa6.35□□□□□ -1.39
PCMTD1-208ENST00000544451 M0R2T5 61 aa6.32□□□□□ -1.4
PCMTD1-208ENST00000544451 RYR3Q15413 4870 aa6.31□□□□□ -1.4
PCMTD1-208ENST00000544451 PLAC4Q8WY50 150 aa6.28□□□□□ -1.4
PCMTD1-208ENST00000544451 KRTAP4-5Q9BYR2 181 aa6.28□□□□□ -1.4
PCMTD1-208ENST00000544451 KRTAP17-1Q9BYP8 105 aa6.27□□□□□ -1.41
PCMTD1-208ENST00000544451 LORP23490 312 aaPredicted RBP6.24□□□□□ -1.41
PCMTD1-208ENST00000544451 RYR2Q92736 4967 aa6.22□□□□□ -1.41
PCMTD1-208ENST00000544451 PKHD1L1Q86WI1 4243 aa6.2□□□□□ -1.42
PCMTD1-208ENST00000544451 KRTAP15-1Q3LI76 137 aa6.2□□□□□ -1.42
PCMTD1-208ENST00000544451 LPAP08519 4548 aa6.19□□□□□ -1.42
PCMTD1-208ENST00000544451 TNP1P09430 55 aa6.08□□□□□ -1.44
PCMTD1-208ENST00000544451 A0A0A0MQY5 61 aa6.06□□□□□ -1.44
PCMTD1-208ENST00000544451 TNXBP22105 4242 aa6.04□□□□□ -1.44
PCMTD1-208ENST00000544451 KRTAP4-1Q9BYQ7 146 aa6.03□□□□□ -1.44
PCMTD1-208ENST00000544451 EPPK1P58107 5090 aaKnown RBP5.99□□□□□ -1.45
PCMTD1-208ENST00000544451 ABCA13Q86UQ4 5058 aa5.98□□□□□ -1.45
PCMTD1-208ENST00000544451 PP632Q6XCG6 107 aa5.96□□□□□ -1.45
PCMTD1-208ENST00000544451 MUC2Q02817 5179 aa5.95□□□□□ -1.46
PCMTD1-208ENST00000544451 KRTAP10-10P60014 251 aa5.86□□□□□ -1.47
PCMTD1-208ENST00000544451 HERC2O95714 4834 aa5.83□□□□□ -1.48
PCMTD1-208ENST00000544451 FAT4Q6V0I7 4981 aa5.67□□□□□ -1.5
PCMTD1-208ENST00000544451 RNF213Q63HN8 5207 aa5.61□□□□□ -1.51
PCMTD1-208ENST00000544451 HERC1Q15751 4861 aa5.59□□□□□ -1.51
PCMTD1-208ENST00000544451 LCE3AQ5TA76 89 aa5.58□□□□□ -1.52
PCMTD1-208ENST00000544451 MUC17Q685J3 4493 aa5.5□□□□□ -1.53
PCMTD1-208ENST00000544451 KRTAP19-2Q3LHN2 52 aa5.46□□□□□ -1.54
PCMTD1-208ENST00000544451 FLGP20930 4061 aaPredicted RBP5.4□□□□□ -1.54
PCMTD1-208ENST00000544451 PCLOQ9Y6V0 5065 aa5.4□□□□□ -1.55
PCMTD1-208ENST00000544451 KRTAP19-1Q8IUB9 90 aa5.38□□□□□ -1.55
PCMTD1-208ENST00000544451 MT1FP04733 61 aa5.38□□□□□ -1.55
PCMTD1-208ENST00000544451 MT1HP80294 61 aa5.37□□□□□ -1.55
PCMTD1-208ENST00000544451 UBR4Q5T4S7 5183 aa5.37□□□□□ -1.55
PCMTD1-208ENST00000544451 KRTAP10-12P60413 245 aa5.35□□□□□ -1.55
PCMTD1-208ENST00000544451 MT2AP02795 61 aa5.35□□□□□ -1.55
PCMTD1-208ENST00000544451 SPRR2GQ9BYE4 73 aa5.35□□□□□ -1.55
PCMTD1-208ENST00000544451 KRTAP12-3P60328 96 aa5.34□□□□□ -1.56
PCMTD1-208ENST00000544451 HMCN2Q8NDA2 5059 aa5.32□□□□□ -1.56
PCMTD1-208ENST00000544451 PRO2289Q9P1D8 64 aa5.3□□□□□ -1.56
PCMTD1-208ENST00000544451 KRTAP23-1A1A580 65 aa5.29□□□□□ -1.56
PCMTD1-208ENST00000544451 LCE2CQ5TA81 110 aa5.29□□□□□ -1.56
PCMTD1-208ENST00000544451 BIRC6Q9NR09 4857 aa5.26□□□□□ -1.57
PCMTD1-208ENST00000544451 KRTAP10-7P60409 375 aaPredicted RBP5.15□□□□□ -1.59
PCMTD1-208ENST00000544451 FSIP2Q5CZC0 6907 aa5.13□□□□□ -1.59
PCMTD1-208ENST00000544451 KRTAP9-8Q9BYQ0 159 aa5.12□□□□□ -1.59
PCMTD1-208ENST00000544451 SPRR5A0A1B0GTR4 108 aa5.12□□□□□ -1.59
PCMTD1-208ENST00000544451 KRTAP8-1Q8IUC2 63 aa5.11□□□□□ -1.59
PCMTD1-208ENST00000544451 MT1XP80297 61 aa5.1□□□□□ -1.59
PCMTD1-208ENST00000544451 KRTAP10-5P60370 271 aa5.09□□□□□ -1.59
PCMTD1-208ENST00000544451 MT1BP07438 61 aa5.08□□□□□ -1.6
PCMTD1-208ENST00000544451 USH2AO75445 5202 aa5.07□□□□□ -1.6
PCMTD1-208ENST00000544451 KMT2DO14686 5537 aa5.03□□□□□ -1.6
PCMTD1-208ENST00000544451 KRTAP19-5Q3LI72 72 aa5.02□□□□□ -1.61
PCMTD1-208ENST00000544451 KRTAP19-8Q3LI54 63 aa5□□□□□ -1.61
PCMTD1-208ENST00000544451 INE1O15225 51 aa4.99□□□□□ -1.61
PCMTD1-208ENST00000544451 CRCT1Q9UGL9 99 aa4.96□□□□□ -1.61
PCMTD1-208ENST00000544451 KRTAP4-8A0A0G2JLE6 195 aa4.95□□□□□ -1.62
PCMTD1-208ENST00000544451 KRTAP4-8Q9BYQ9 185 aa4.95□□□□□ -1.62
PCMTD1-208ENST00000544451 LCE2DQ5TA82 110 aaPredicted RBP4.93□□□□□ -1.62
PCMTD1-208ENST00000544451 KRTAP9-3Q9BYQ3 159 aa4.89□□□□□ -1.63
PCMTD1-208ENST00000544451 LCE3CQ5T5A8 94 aa4.86□□□□□ -1.63
PCMTD1-208ENST00000544451 KRTAP4-7Q9BYR0 210 aa4.83□□□□□ -1.64
PCMTD1-208ENST00000544451 LCE2BO14633 110 aa4.79□□□□□ -1.64
PCMTD1-208ENST00000544451 OBSCNQ5VST9 7968 aa4.76□□□□□ -1.65
PCMTD1-208ENST00000544451 DSTQ03001 7570 aaKnown RBP4.74□□□□□ -1.65
PCMTD1-208ENST00000544451 SYNE1Q8NF91 8797 aaKnown RBP4.67□□□□□ -1.66
PCMTD1-208ENST00000544451 FCGBPQ9Y6R7 5405 aaPredicted RBP4.62□□□□□ -1.67
PCMTD1-208ENST00000544451 KRTAP9-6A8MVA2 160 aa4.57□□□□□ -1.68
PCMTD1-208ENST00000544451 MT1GP13640 62 aa4.51□□□□□ -1.69
PCMTD1-208ENST00000544451 KRTAP4-3Q9BYR4 195 aa4.49□□□□□ -1.69
PCMTD1-208ENST00000544451 LOC100996750A0A140TA64 210 aa4.49□□□□□ -1.69
PCMTD1-208ENST00000544451 KRTAP19-7Q3SYF9 63 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms