RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 APOBP04114 4563 aaKnown RBP12.25□□□□□ -0.45
SHD-201ENST00000543264 KMT2CQ8NEZ4 4911 aaKnown RBP12.24□□□□□ -0.45
SHD-201ENST00000543264 KRTAP3-3Q9BYR6 98 aa12.24□□□□□ -0.45
SHD-201ENST00000543264 KRTAP10-4P60372 401 aaPredicted RBP12.21□□□□□ -0.45
SHD-201ENST00000543264 TPRXLQ17RH7 258 aa12.17□□□□□ -0.46
SHD-201ENST00000543264 KRTAP3-2Q9BYR7 98 aa12.16□□□□□ -0.46
SHD-201ENST00000543264 SPINT4Q6UDR6 99 aa12.12□□□□□ -0.47
SHD-201ENST00000543264 C10orf95Q9H7T3 257 aa12.09□□□□□ -0.47
SHD-201ENST00000543264 RYR2Q92736 4967 aa12.08□□□□□ -0.48
SHD-201ENST00000543264 S4R3F8 94 aa12.07□□□□□ -0.48
SHD-201ENST00000543264 KRTAP10-8P60410 259 aa12.04□□□□□ -0.48
SHD-201ENST00000543264 FAT3Q8TDW7 4589 aa12.03□□□□□ -0.48
SHD-201ENST00000543264 HSPG2P98160 4391 aa12.01□□□□□ -0.49
SHD-201ENST00000543264 A0A1B0GVY2 172 aa11.96□□□□□ -0.49
SHD-201ENST00000543264 RYR3Q15413 4870 aa11.94□□□□□ -0.5
SHD-201ENST00000543264 KRTAP12-2P59991 146 aa11.93□□□□□ -0.5
SHD-201ENST00000543264 LRP1Q07954 4544 aaKnown RBP11.92□□□□□ -0.5
SHD-201ENST00000543264 XP32Q5T750 250 aa11.87□□□□□ -0.51
SHD-201ENST00000543264 MYCBP2O75592 4640 aa11.85□□□□□ -0.51
SHD-201ENST00000543264 TNXBP22105 4242 aa11.83□□□□□ -0.51
SHD-201ENST00000543264 KRTAP15-1Q3LI76 137 aa11.79□□□□□ -0.52
SHD-201ENST00000543264 KRTAP12-1P59990 96 aa11.78□□□□□ -0.52
SHD-201ENST00000543264 NDUFAF8A1L188 74 aa11.75□□□□□ -0.53
SHD-201ENST00000543264 M0QZ58 72 aa11.56□□□□□ -0.56
SHD-201ENST00000543264 Q5VSD8 79 aa11.56□□□□□ -0.56
SHD-201ENST00000543264 LPAP08519 4548 aa11.55□□□□□ -0.56
SHD-201ENST00000543264 EPPK1P58107 5090 aaKnown RBP11.53□□□□□ -0.56
SHD-201ENST00000543264 KIAA1109Q2LD37 5005 aa11.46□□□□□ -0.57
SHD-201ENST00000543264 LRP2P98164 4655 aa11.38□□□□□ -0.59
SHD-201ENST00000543264 RYR1P21817 5038 aa11.37□□□□□ -0.59
SHD-201ENST00000543264 KRTAP17-1Q9BYP8 105 aa11.35□□□□□ -0.59
SHD-201ENST00000543264 MT1HL1P0DM35 61 aa11.29□□□□□ -0.6
SHD-201ENST00000543264 R4GN34 69 aa11.26□□□□□ -0.61
SHD-201ENST00000543264 PLAC4Q8WY50 150 aa11.11□□□□□ -0.63
SHD-201ENST00000543264 LORP23490 312 aaPredicted RBP11.08□□□□□ -0.64
SHD-201ENST00000543264 KRTAP4-5Q9BYR2 181 aa10.99□□□□□ -0.65
SHD-201ENST00000543264 ABCA13Q86UQ4 5058 aa10.88□□□□□ -0.67
SHD-201ENST00000543264 MUC17Q685J3 4493 aa10.8□□□□□ -0.68
SHD-201ENST00000543264 BIRC6Q9NR09 4857 aa10.79□□□□□ -0.68
SHD-201ENST00000543264 CAMK2N1Q7Z7J9 78 aa10.77□□□□□ -0.68
SHD-201ENST00000543264 HERC2O95714 4834 aa10.76□□□□□ -0.69
SHD-201ENST00000543264 SEC61BP60468 96 aaKnown RBP10.75□□□□□ -0.69
SHD-201ENST00000543264 PP632Q6XCG6 107 aa10.72□□□□□ -0.69
SHD-201ENST00000543264 LUZP6Q538Z0 58 aa10.71□□□□□ -0.69
SHD-201ENST00000543264 KRTAP4-1Q9BYQ7 146 aa10.71□□□□□ -0.69
SHD-201ENST00000543264 PCLOQ9Y6V0 5065 aa10.55□□□□□ -0.72
SHD-201ENST00000543264 KRTAP19-2Q3LHN2 52 aa10.5□□□□□ -0.73
SHD-201ENST00000543264 J3QL48 77 aa10.45□□□□□ -0.74
SHD-201ENST00000543264 A0A0A0MQY5 61 aa10.44□□□□□ -0.74
SHD-201ENST00000543264 HERC1Q15751 4861 aa10.39□□□□□ -0.75
SHD-201ENST00000543264 TNP1P09430 55 aa10.38□□□□□ -0.75
SHD-201ENST00000543264 MUC2Q02817 5179 aa10.29□□□□□ -0.76
SHD-201ENST00000543264 FLGP20930 4061 aaPredicted RBP10.23□□□□□ -0.77
SHD-201ENST00000543264 KRTAP23-1A1A580 65 aa10.19□□□□□ -0.78
SHD-201ENST00000543264 SPRR5A0A1B0GTR4 108 aa10.16□□□□□ -0.78
SHD-201ENST00000543264 HMCN2Q8NDA2 5059 aa10.06□□□□□ -0.8
SHD-201ENST00000543264 UBR4Q5T4S7 5183 aa9.82□□□□□ -0.84
SHD-201ENST00000543264 SPRR2GQ9BYE4 73 aa9.81□□□□□ -0.84
SHD-201ENST00000543264 LCE3AQ5TA76 89 aa9.8□□□□□ -0.84
SHD-201ENST00000543264 RNF213Q63HN8 5207 aa9.79□□□□□ -0.84
SHD-201ENST00000543264 KRTAP19-1Q8IUB9 90 aa9.78□□□□□ -0.84
SHD-201ENST00000543264 FAT4Q6V0I7 4981 aa9.76□□□□□ -0.85
SHD-201ENST00000543264 LCE2CQ5TA81 110 aa9.69□□□□□ -0.86
SHD-201ENST00000543264 M0R2T5 61 aa9.63□□□□□ -0.87
SHD-201ENST00000543264 KRTAP10-10P60014 251 aa9.48□□□□□ -0.89
SHD-201ENST00000543264 KRTAP8-1Q8IUC2 63 aa9.47□□□□□ -0.89
SHD-201ENST00000543264 PRO2289Q9P1D8 64 aa9.46□□□□□ -0.9
SHD-201ENST00000543264 MT1FP04733 61 aa9.43□□□□□ -0.9
SHD-201ENST00000543264 MT1HP80294 61 aa9.4□□□□□ -0.9
SHD-201ENST00000543264 MT2AP02795 61 aa9.39□□□□□ -0.91
SHD-201ENST00000543264 INE1O15225 51 aa9.3□□□□□ -0.92
SHD-201ENST00000543264 KRTAP12-3P60328 96 aa9.29□□□□□ -0.92
SHD-201ENST00000543264 KRTAP10-5P60370 271 aa9.28□□□□□ -0.92
SHD-201ENST00000543264 KRTAP19-8Q3LI54 63 aa9.27□□□□□ -0.93
SHD-201ENST00000543264 KRTAP9-8Q9BYQ0 159 aa9.27□□□□□ -0.93
SHD-201ENST00000543264 MT1XP80297 61 aa9.25□□□□□ -0.93
SHD-201ENST00000543264 KRTAP10-12P60413 245 aa9.22□□□□□ -0.93
SHD-201ENST00000543264 MT1BP07438 61 aa9.2□□□□□ -0.94
SHD-201ENST00000543264 KRTAP10-7P60409 375 aaPredicted RBP9.09□□□□□ -0.95
SHD-201ENST00000543264 KRTAP9-3Q9BYQ3 159 aa8.84□□□□□ -0.99
SHD-201ENST00000543264 KRTAP19-5Q3LI72 72 aa8.78□□□□□ -1
SHD-201ENST00000543264 LCE3CQ5T5A8 94 aa8.76□□□□□ -1.01
SHD-201ENST00000543264 LCE2AQ5TA79 106 aaPredicted RBP8.61□□□□□ -1.03
SHD-201ENST00000543264 KMT2DO14686 5537 aa8.6□□□□□ -1.03
SHD-201ENST00000543264 KRTAP9-6A8MVA2 160 aa8.53□□□□□ -1.04
SHD-201ENST00000543264 KRTAP4-8A0A0G2JLE6 195 aa8.47□□□□□ -1.05
SHD-201ENST00000543264 KRTAP4-8Q9BYQ9 185 aa8.47□□□□□ -1.05
SHD-201ENST00000543264 LCE2BO14633 110 aa8.46□□□□□ -1.06
SHD-201ENST00000543264 USH2AO75445 5202 aa8.45□□□□□ -1.06
SHD-201ENST00000543264 KRTAP4-7Q9BYR0 210 aa8.33□□□□□ -1.08
SHD-201ENST00000543264 KRTAP2-3P0C7H8 128 aa8.31□□□□□ -1.08
SHD-201ENST00000543264 KRTAP2-4Q9BYR9 128 aa8.31□□□□□ -1.08
SHD-201ENST00000543264 KRTAP2-1Q9BYU5 128 aa8.31□□□□□ -1.08
SHD-201ENST00000543264 KRTAP19-7Q3SYF9 63 aa8.23□□□□□ -1.09
SHD-201ENST00000543264 FSIP2Q5CZC0 6907 aa8.2□□□□□ -1.1
SHD-201ENST00000543264 MT1LQ93083 61 aa8.03□□□□□ -1.12
SHD-201ENST00000543264 SSPOA2VEC9 5147 aa7.96□□□□□ -1.14
SHD-201ENST00000543264 MT1EP04732 61 aa7.95□□□□□ -1.14
SHD-201ENST00000543264 KRTAP19-4Q3LI73 84 aa7.94□□□□□ -1.14
SHD-201ENST00000543264 LOC100996750A0A140TA64 210 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms