RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 MEGF8Q7Z7M0 2845 aa1.76□□□□□ -2.13
MDM2-229ENST00000543046 CFAP46Q8IYW2 2715 aa1.75□□□□□ -2.13
MDM2-229ENST00000543046 LRRK2Q5S007 2527 aa1.75□□□□□ -2.13
MDM2-229ENST00000543046 DNAH2Q9P225 4427 aa1.75□□□□□ -2.13
MDM2-229ENST00000543046 TTC28Q96AY4 2481 aa1.75□□□□□ -2.13
MDM2-229ENST00000543046 FRAS1Q86XX4 4008 aa1.75□□□□□ -2.13
MDM2-229ENST00000543046 HELZ2Q9BYK8 2649 aaKnown RBP1.75□□□□□ -2.13
MDM2-229ENST00000543046 FBN2P35556 2912 aa1.75□□□□□ -2.13
MDM2-229ENST00000543046 EPG5Q9HCE0 2579 aa1.75□□□□□ -2.13
MDM2-229ENST00000543046 ACACBO00763 2458 aa1.75□□□□□ -2.13
MDM2-229ENST00000543046 VWFP04275 2813 aa1.74□□□□□ -2.13
MDM2-229ENST00000543046 ZNF462Q96JM2 2506 aa1.74□□□□□ -2.13
MDM2-229ENST00000543046 DNAH9Q9NYC9 4486 aa1.74□□□□□ -2.13
MDM2-229ENST00000543046 KRTAP6-3Q3LI67 103 aa1.74□□□□□ -2.13
MDM2-229ENST00000543046 SMR3AQ99954 134 aa1.74□□□□□ -2.13
MDM2-229ENST00000543046 DNAH3Q8TD57 4116 aa1.74□□□□□ -2.13
MDM2-229ENST00000543046 ZNF292O60281 2723 aa1.74□□□□□ -2.13
MDM2-229ENST00000543046 HIVEP1P15822 2718 aa1.74□□□□□ -2.13
MDM2-229ENST00000543046 FBN1P35555 2871 aaKnown RBP1.73□□□□□ -2.13
MDM2-229ENST00000543046 HECTD1Q9ULT8 2610 aa1.73□□□□□ -2.13
MDM2-229ENST00000543046 ZFHX2Q9C0A1 2572 aaPredicted RBP1.73□□□□□ -2.13
MDM2-229ENST00000543046 ANK2Q01484 3957 aa1.73□□□□□ -2.13
MDM2-229ENST00000543046 SETD2Q9BYW2 2564 aaPredicted RBP1.73□□□□□ -2.13
MDM2-229ENST00000543046 CMYA5Q8N3K9 4069 aa1.73□□□□□ -2.13
MDM2-229ENST00000543046 ACANP16112 2415 aa1.72□□□□□ -2.13
MDM2-229ENST00000543046 ABCA12Q86UK0 2595 aa1.72□□□□□ -2.13
MDM2-229ENST00000543046 CSMD2Q7Z408 3487 aa1.72□□□□□ -2.13
MDM2-229ENST00000543046 DNAH11Q96DT5 4516 aa1.72□□□□□ -2.13
MDM2-229ENST00000543046 SACSQ9NZJ4 4579 aa1.71□□□□□ -2.14
MDM2-229ENST00000543046 ZANQ9Y493 2812 aa1.71□□□□□ -2.14
MDM2-229ENST00000543046 CUBNO60494 3623 aa1.7□□□□□ -2.14
MDM2-229ENST00000543046 BDP1A6H8Y1 2624 aa1.7□□□□□ -2.14
MDM2-229ENST00000543046 TGP01266 2768 aa1.7□□□□□ -2.14
MDM2-229ENST00000543046 MUC3AQ02505 3323 aa1.7□□□□□ -2.14
MDM2-229ENST00000543046 LYSTQ99698 3801 aa1.69□□□□□ -2.14
MDM2-229ENST00000543046 HUWE1Q7Z6Z7 4374 aaKnown RBP1.69□□□□□ -2.14
MDM2-229ENST00000543046 DMBT1Q9UGM3 2413 aaPredicted RBP1.69□□□□□ -2.14
MDM2-229ENST00000543046 DNAH6Q9C0G6 4158 aa1.69□□□□□ -2.14
MDM2-229ENST00000543046 BAHCC1Q9P281 2608 aa1.69□□□□□ -2.14
MDM2-229ENST00000543046 DNAH7Q8WXX0 4024 aa1.69□□□□□ -2.14
MDM2-229ENST00000543046 NIPBLQ6KC79 2804 aaeCLIP1.69□□□□□ -2.14
MDM2-229ENST00000543046 PRKDCP78527 4128 aaKnown RBP1.69□□□□□ -2.14
MDM2-229ENST00000543046 FASNP49327 2511 aaKnown RBP1.69□□□□□ -2.14
MDM2-229ENST00000543046 PDZD2O15018 2839 aa1.68□□□□□ -2.14
MDM2-229ENST00000543046 FAM208BQ5VWN6 2430 aa1.68□□□□□ -2.14
MDM2-229ENST00000543046 C9orf92A6NGG3 77 aa1.68□□□□□ -2.14
MDM2-229ENST00000543046 Q5VSD8 79 aa1.68□□□□□ -2.14
MDM2-229ENST00000543046 PKD1L1Q8TDX9 2849 aa1.68□□□□□ -2.14
MDM2-229ENST00000543046 NBEAL1Q6ZS30 2694 aa1.68□□□□□ -2.14
MDM2-229ENST00000543046 ITPR3Q14573 2671 aa1.67□□□□□ -2.14
MDM2-229ENST00000543046 MYCBP2O75592 4640 aa1.67□□□□□ -2.14
MDM2-229ENST00000543046 CACNA1AO00555 2505 aa1.66□□□□□ -2.14
MDM2-229ENST00000543046 CSMD3Q7Z407 3707 aa1.66□□□□□ -2.14
MDM2-229ENST00000543046 MYO18BQ8IUG5 2567 aa1.66□□□□□ -2.14
MDM2-229ENST00000543046 TENM3Q9P273 2699 aa1.65□□□□□ -2.14
MDM2-229ENST00000543046 ITPR2Q14571 2701 aa1.65□□□□□ -2.15
MDM2-229ENST00000543046 POLQO75417 2590 aa1.64□□□□□ -2.15
MDM2-229ENST00000543046 STAB2Q8WWQ8 2551 aa1.64□□□□□ -2.15
MDM2-229ENST00000543046 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
MDM2-229ENST00000543046 HECTD4Q9Y4D8 3996 aa1.63□□□□□ -2.15
MDM2-229ENST00000543046 FLNAP21333 2647 aaKnown RBP1.62□□□□□ -2.15
MDM2-229ENST00000543046 TNP1P09430 55 aa1.61□□□□□ -2.15
MDM2-229ENST00000543046 FBN3Q75N90 2809 aa1.61□□□□□ -2.15
MDM2-229ENST00000543046 ZNF469Q96JG9 3925 aaPredicted RBP1.6□□□□□ -2.15
MDM2-229ENST00000543046 TEP1Q99973 2627 aaKnown RBP1.6□□□□□ -2.15
MDM2-229ENST00000543046 APOBP04114 4563 aaKnown RBP1.6□□□□□ -2.15
MDM2-229ENST00000543046 COL7A1Q02388 2944 aa1.6□□□□□ -2.15
MDM2-229ENST00000543046 MAST4O15021 2626 aa1.6□□□□□ -2.15
MDM2-229ENST00000543046 ATRQ13535 2644 aa1.6□□□□□ -2.15
MDM2-229ENST00000543046 LRP1Q07954 4544 aaKnown RBP1.59□□□□□ -2.15
MDM2-229ENST00000543046 FLNBO75369 2602 aaKnown RBP1.59□□□□□ -2.16
MDM2-229ENST00000543046 NSD1Q96L73 2696 aaPredicted RBP1.59□□□□□ -2.16
MDM2-229ENST00000543046 PLECQ15149 4684 aaKnown RBP1.58□□□□□ -2.16
MDM2-229ENST00000543046 PKHD1L1Q86WI1 4243 aa1.58□□□□□ -2.16
MDM2-229ENST00000543046 FLNCQ14315 2725 aa1.58□□□□□ -2.16
MDM2-229ENST00000543046 NOTCH1P46531 2555 aa1.57□□□□□ -2.16
MDM2-229ENST00000543046 PKD1P98161 4303 aa1.57□□□□□ -2.16
MDM2-229ENST00000543046 KMT2AQ03164 3969 aa1.57□□□□□ -2.16
MDM2-229ENST00000543046 LRP1BQ9NZR2 4599 aa1.57□□□□□ -2.16
MDM2-229ENST00000543046 DNAH5Q8TE73 4624 aa1.56□□□□□ -2.16
MDM2-229ENST00000543046 DYNC1H1Q14204 4646 aaKnown RBP1.56□□□□□ -2.16
MDM2-229ENST00000543046 IGSF10Q6WRI0 2623 aa1.55□□□□□ -2.16
MDM2-229ENST00000543046 J3QKU1 62 aa1.54□□□□□ -2.16
MDM2-229ENST00000543046 TENM1Q9UKZ4 2725 aa1.53□□□□□ -2.16
MDM2-229ENST00000543046 FAT2Q9NYQ8 4349 aa1.53□□□□□ -2.16
MDM2-229ENST00000543046 MGAM2Q2M2H8 2515 aa1.53□□□□□ -2.16
MDM2-229ENST00000543046 USP24Q9UPU5 2620 aa1.52□□□□□ -2.17
MDM2-229ENST00000543046 STAB1Q9NY15 2570 aa1.52□□□□□ -2.17
MDM2-229ENST00000543046 KRTAP10-4P60372 401 aaPredicted RBP1.52□□□□□ -2.17
MDM2-229ENST00000543046 FAT3Q8TDW7 4589 aa1.52□□□□□ -2.17
MDM2-229ENST00000543046 HSPG2P98160 4391 aa1.51□□□□□ -2.17
MDM2-229ENST00000543046 TNXBP22105 4242 aa1.51□□□□□ -2.17
MDM2-229ENST00000543046 VPS13BQ7Z7G8 4022 aa1.5□□□□□ -2.17
MDM2-229ENST00000543046 STARD9Q9P2P6 4700 aa1.5□□□□□ -2.17
MDM2-229ENST00000543046 HMCN1Q96RW7 5635 aa1.5□□□□□ -2.17
MDM2-229ENST00000543046 PKHD1P08F94 4074 aa1.5□□□□□ -2.17
MDM2-229ENST00000543046 FAT1Q14517 4588 aa1.48□□□□□ -2.17
MDM2-229ENST00000543046 KRTAP8-1Q8IUC2 63 aa1.48□□□□□ -2.17
MDM2-229ENST00000543046 FLGP20930 4061 aaPredicted RBP1.46□□□□□ -2.18
MDM2-229ENST00000543046 CRCT1Q9UGL9 99 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms