RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 ACYP2P14621 99 aa2.95□□□□□ -1.94
ATPAF1-212ENST00000542495 PCLOQ9Y6V0 5065 aa2.94□□□□□ -1.94
ATPAF1-212ENST00000542495 PRAC1Q96KF2 57 aa2.94□□□□□ -1.94
ATPAF1-212ENST00000542495 SPINK7P58062 85 aa2.93□□□□□ -1.94
ATPAF1-212ENST00000542495 KIAA1109Q2LD37 5005 aa2.93□□□□□ -1.94
ATPAF1-212ENST00000542495 A0A1B0GVY2 172 aa2.92□□□□□ -1.94
ATPAF1-212ENST00000542495 A6NN06 94 aa2.92□□□□□ -1.94
ATPAF1-212ENST00000542495 VPS13BQ7Z7G8 4022 aa2.91□□□□□ -1.94
ATPAF1-212ENST00000542495 RYR1P21817 5038 aa2.91□□□□□ -1.94
ATPAF1-212ENST00000542495 SPINK1P00995 79 aa2.9□□□□□ -1.94
ATPAF1-212ENST00000542495 KTN1-AS1Q86SY8 53 aa2.9□□□□□ -1.94
ATPAF1-212ENST00000542495 SPTSSBQ8NFR3 76 aa2.9□□□□□ -1.94
ATPAF1-212ENST00000542495 RETNLBQ9BQ08 111 aa2.9□□□□□ -1.94
ATPAF1-212ENST00000542495 PKHD1P08F94 4074 aa2.9□□□□□ -1.94
ATPAF1-212ENST00000542495 RPS29P62273 56 aaKnown RBP2.89□□□□□ -1.95
ATPAF1-212ENST00000542495 TYMSOSQ8TAI1 123 aa2.89□□□□□ -1.95
ATPAF1-212ENST00000542495 DYNC1H1Q14204 4646 aaKnown RBP2.88□□□□□ -1.95
ATPAF1-212ENST00000542495 IGKV2D-30A0A075B6S6 120 aa2.88□□□□□ -1.95
ATPAF1-212ENST00000542495 PKHD1L1Q86WI1 4243 aa2.87□□□□□ -1.95
ATPAF1-212ENST00000542495 ABCA13Q86UQ4 5058 aa2.86□□□□□ -1.95
ATPAF1-212ENST00000542495 A0A1B0GU69 56 aa2.86□□□□□ -1.95
ATPAF1-212ENST00000542495 SPATA8Q6RVD6 105 aa2.86□□□□□ -1.95
ATPAF1-212ENST00000542495 LINC00304Q8N9R0 145 aa2.86□□□□□ -1.95
ATPAF1-212ENST00000542495 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.85□□□□□ -1.95
ATPAF1-212ENST00000542495 C7orf65Q6ZTY9 151 aa2.85□□□□□ -1.95
ATPAF1-212ENST00000542495 HSPG2P98160 4391 aa2.84□□□□□ -1.95
ATPAF1-212ENST00000542495 A8MUU9 505 aa2.83□□□□□ -1.96
ATPAF1-212ENST00000542495 KRTAP10-4P60372 401 aaPredicted RBP2.83□□□□□ -1.96
ATPAF1-212ENST00000542495 C20orf166-AS1Q96NR2 134 aa2.83□□□□□ -1.96
ATPAF1-212ENST00000542495 APOBP04114 4563 aaKnown RBP2.83□□□□□ -1.96
ATPAF1-212ENST00000542495 UQCR11O14957 56 aa2.82□□□□□ -1.96
ATPAF1-212ENST00000542495 MIR22HGQ0VDD5 57 aa2.82□□□□□ -1.96
ATPAF1-212ENST00000542495 RBM12B-AS1Q9P1G2 102 aa2.82□□□□□ -1.96
ATPAF1-212ENST00000542495 SMR3BP02814 79 aaPredicted RBP2.79□□□□□ -1.96
ATPAF1-212ENST00000542495 C9orf92A6NGG3 77 aa2.77□□□□□ -1.97
ATPAF1-212ENST00000542495 HERC1Q15751 4861 aa2.77□□□□□ -1.97
ATPAF1-212ENST00000542495 FAT1Q14517 4588 aa2.77□□□□□ -1.97
ATPAF1-212ENST00000542495 Q5VSD8 79 aa2.76□□□□□ -1.97
ATPAF1-212ENST00000542495 ADM2Q7Z4H4 148 aa2.75□□□□□ -1.97
ATPAF1-212ENST00000542495 DMBT1Q9UGM3 2413 aaPredicted RBP2.75□□□□□ -1.97
ATPAF1-212ENST00000542495 H0YAA0 97 aa2.74□□□□□ -1.97
ATPAF1-212ENST00000542495 TNXBP22105 4242 aa2.73□□□□□ -1.97
ATPAF1-212ENST00000542495 COX6B2Q6YFQ2 88 aa2.73□□□□□ -1.97
ATPAF1-212ENST00000542495 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
ATPAF1-212ENST00000542495 FAT3Q8TDW7 4589 aa2.72□□□□□ -1.97
ATPAF1-212ENST00000542495 MYCBP2O75592 4640 aa2.72□□□□□ -1.97
ATPAF1-212ENST00000542495 A0A1B0GU33 70 aa2.72□□□□□ -1.97
ATPAF1-212ENST00000542495 KRTAP10-8P60410 259 aa2.72□□□□□ -1.97
ATPAF1-212ENST00000542495 H1FX-AS1Q4G0G2 97 aa2.72□□□□□ -1.97
ATPAF1-212ENST00000542495 FLG2Q5D862 2391 aaPredicted RBP2.71□□□□□ -1.97
ATPAF1-212ENST00000542495 RPL37P61927 97 aaKnown RBP2.69□□□□□ -1.98
ATPAF1-212ENST00000542495 LINC01554Q52M75 96 aa2.68□□□□□ -1.98
ATPAF1-212ENST00000542495 LRP1Q07954 4544 aaKnown RBP2.68□□□□□ -1.98
ATPAF1-212ENST00000542495 CSAG1Q6PB30 78 aa2.67□□□□□ -1.98
ATPAF1-212ENST00000542495 KRTAP10-6P60371 365 aaPredicted RBP2.66□□□□□ -1.98
ATPAF1-212ENST00000542495 KRTAP5-11Q6L8G4 156 aa2.66□□□□□ -1.98
ATPAF1-212ENST00000542495 UBR4Q5T4S7 5183 aa2.64□□□□□ -1.99
ATPAF1-212ENST00000542495 HMCN2Q8NDA2 5059 aa2.63□□□□□ -1.99
ATPAF1-212ENST00000542495 MT1HL1P0DM35 61 aa2.62□□□□□ -1.99
ATPAF1-212ENST00000542495 KRTAP25-1Q3LHN0 102 aa2.62□□□□□ -1.99
ATPAF1-212ENST00000542495 NDUFAF8A1L188 74 aa2.61□□□□□ -1.99
ATPAF1-212ENST00000542495 KRTAP5-9P26371 169 aa2.61□□□□□ -1.99
ATPAF1-212ENST00000542495 KRTAP13-4Q3LI77 160 aa2.61□□□□□ -1.99
ATPAF1-212ENST00000542495 S4R3F8 94 aa2.61□□□□□ -1.99
ATPAF1-212ENST00000542495 K7ERS5 55 aa2.61□□□□□ -1.99
ATPAF1-212ENST00000542495 P0C880 135 aa2.58□□□□□ -2
ATPAF1-212ENST00000542495 ROMO1P60602 79 aa2.58□□□□□ -2
ATPAF1-212ENST00000542495 TPRXLQ17RH7 258 aa2.56□□□□□ -2
ATPAF1-212ENST00000542495 CAMK2N1Q7Z7J9 78 aa2.56□□□□□ -2
ATPAF1-212ENST00000542495 KRTAP10-7P60409 375 aaPredicted RBP2.55□□□□□ -2
ATPAF1-212ENST00000542495 LRP2P98164 4655 aa2.55□□□□□ -2
ATPAF1-212ENST00000542495 A0A0D9SG42 100 aa2.54□□□□□ -2
ATPAF1-212ENST00000542495 RNF213Q63HN8 5207 aa2.54□□□□□ -2
ATPAF1-212ENST00000542495 LCE1AQ5T7P2 110 aa2.54□□□□□ -2
ATPAF1-212ENST00000542495 CRIPTQ9P021 101 aa2.53□□□□□ -2
ATPAF1-212ENST00000542495 LPAP08519 4548 aa2.52□□□□□ -2.01
ATPAF1-212ENST00000542495 KRTAP12-2P59991 146 aa2.52□□□□□ -2.01
ATPAF1-212ENST00000542495 M0QZ58 72 aa2.51□□□□□ -2.01
ATPAF1-212ENST00000542495 KRTAP12-1P59990 96 aa2.51□□□□□ -2.01
ATPAF1-212ENST00000542495 MUC17Q685J3 4493 aa2.46□□□□□ -2.02
ATPAF1-212ENST00000542495 SPINT4Q6UDR6 99 aa2.46□□□□□ -2.02
ATPAF1-212ENST00000542495 C10orf95Q9H7T3 257 aa2.46□□□□□ -2.02
ATPAF1-212ENST00000542495 KRTAP5-4Q6L8H1 288 aa2.44□□□□□ -2.02
ATPAF1-212ENST00000542495 KRTAP19-2Q3LHN2 52 aa2.44□□□□□ -2.02
ATPAF1-212ENST00000542495 LUZP6Q538Z0 58 aa2.44□□□□□ -2.02
ATPAF1-212ENST00000542495 KRTAP4-1Q9BYQ7 146 aa2.44□□□□□ -2.02
ATPAF1-212ENST00000542495 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
ATPAF1-212ENST00000542495 MUC2Q02817 5179 aa2.42□□□□□ -2.02
ATPAF1-212ENST00000542495 MT3P25713 68 aa2.41□□□□□ -2.02
ATPAF1-212ENST00000542495 KRTAP5-1Q6L8H4 278 aa2.41□□□□□ -2.02
ATPAF1-212ENST00000542495 R4GN34 69 aa2.41□□□□□ -2.02
ATPAF1-212ENST00000542495 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
ATPAF1-212ENST00000542495 FAT4Q6V0I7 4981 aa2.36□□□□□ -2.03
ATPAF1-212ENST00000542495 FLGP20930 4061 aaPredicted RBP2.34□□□□□ -2.04
ATPAF1-212ENST00000542495 LCE1FQ5T754 118 aa2.3□□□□□ -2.04
ATPAF1-212ENST00000542495 PP632Q6XCG6 107 aa2.3□□□□□ -2.04
ATPAF1-212ENST00000542495 KRTAP2-2Q9BYT5 123 aa2.3□□□□□ -2.04
ATPAF1-212ENST00000542495 LCE1EQ5T753 118 aa2.29□□□□□ -2.04
ATPAF1-212ENST00000542495 PLAC4Q8WY50 150 aa2.28□□□□□ -2.04
ATPAF1-212ENST00000542495 CRCT1Q9UGL9 99 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms