RNA–Protein interactions for RNA: ENST00000541764.5

LMO3-227, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 1,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-227ENST00000541764 C7orf65Q6ZTY9 151 aa5.46□□□□□ -1.53
LMO3-227ENST00000541764 C20orf166-AS1Q96NR2 134 aa5.46□□□□□ -1.53
LMO3-227ENST00000541764 PKHD1P08F94 4074 aa5.46□□□□□ -1.54
LMO3-227ENST00000541764 A8MUU9 505 aa5.45□□□□□ -1.54
LMO3-227ENST00000541764 PMAIP1Q13794 54 aa5.45□□□□□ -1.54
LMO3-227ENST00000541764 SPINK7P58062 85 aa5.44□□□□□ -1.54
LMO3-227ENST00000541764 FAT1Q14517 4588 aa5.4□□□□□ -1.54
LMO3-227ENST00000541764 A6NN06 94 aa5.4□□□□□ -1.54
LMO3-227ENST00000541764 SMR3BP02814 79 aaPredicted RBP5.4□□□□□ -1.54
LMO3-227ENST00000541764 A0A1B0GU69 56 aa5.39□□□□□ -1.55
LMO3-227ENST00000541764 RYR2Q92736 4967 aa5.38□□□□□ -1.55
LMO3-227ENST00000541764 SPATA8Q6RVD6 105 aa5.37□□□□□ -1.55
LMO3-227ENST00000541764 SPTSSBQ8NFR3 76 aa5.37□□□□□ -1.55
LMO3-227ENST00000541764 KTN1-AS1Q86SY8 53 aa5.35□□□□□ -1.55
LMO3-227ENST00000541764 UQCR11O14957 56 aa5.32□□□□□ -1.56
LMO3-227ENST00000541764 C9orf92A6NGG3 77 aa5.31□□□□□ -1.56
LMO3-227ENST00000541764 KRTAP10-8P60410 259 aa5.31□□□□□ -1.56
LMO3-227ENST00000541764 Q8N1X5 172 aa5.3□□□□□ -1.56
LMO3-227ENST00000541764 FAT3Q8TDW7 4589 aa5.3□□□□□ -1.56
LMO3-227ENST00000541764 MIR22HGQ0VDD5 57 aa5.28□□□□□ -1.56
LMO3-227ENST00000541764 KRTAP3-1Q9BYR8 98 aa5.28□□□□□ -1.56
LMO3-227ENST00000541764 TNXBP22105 4242 aa5.27□□□□□ -1.57
LMO3-227ENST00000541764 SEC61GP60059 68 aa5.26□□□□□ -1.57
LMO3-227ENST00000541764 FLG2Q5D862 2391 aaPredicted RBP5.25□□□□□ -1.57
LMO3-227ENST00000541764 COX6B2Q6YFQ2 88 aa5.25□□□□□ -1.57
LMO3-227ENST00000541764 HSPG2P98160 4391 aa5.23□□□□□ -1.57
LMO3-227ENST00000541764 KMT2CQ8NEZ4 4911 aaKnown RBP5.21□□□□□ -1.58
LMO3-227ENST00000541764 Q5VSD8 79 aa5.2□□□□□ -1.58
LMO3-227ENST00000541764 RPL37P61927 97 aaKnown RBP5.2□□□□□ -1.58
LMO3-227ENST00000541764 RYR1P21817 5038 aa5.18□□□□□ -1.58
LMO3-227ENST00000541764 LRP1Q07954 4544 aaKnown RBP5.16□□□□□ -1.58
LMO3-227ENST00000541764 RBM12B-AS1Q9P1G2 102 aa5.15□□□□□ -1.58
LMO3-227ENST00000541764 A0A1B0GU33 70 aa5.13□□□□□ -1.59
LMO3-227ENST00000541764 H1FX-AS1Q4G0G2 97 aa5.13□□□□□ -1.59
LMO3-227ENST00000541764 H0YAA0 97 aa5.13□□□□□ -1.59
LMO3-227ENST00000541764 KRTAP23-1A1A580 65 aa5.12□□□□□ -1.59
LMO3-227ENST00000541764 MT1HL1P0DM35 61 aa5.12□□□□□ -1.59
LMO3-227ENST00000541764 RYR3Q15413 4870 aa5.06□□□□□ -1.6
LMO3-227ENST00000541764 TPRXLQ17RH7 258 aa5.03□□□□□ -1.6
LMO3-227ENST00000541764 KRTAP10-6P60371 365 aaPredicted RBP5.02□□□□□ -1.61
LMO3-227ENST00000541764 ADM2Q7Z4H4 148 aa5.02□□□□□ -1.61
LMO3-227ENST00000541764 PRAC1Q96KF2 57 aa5.02□□□□□ -1.61
LMO3-227ENST00000541764 S4R3F8 94 aa5.02□□□□□ -1.61
LMO3-227ENST00000541764 MYCBP2O75592 4640 aa5.02□□□□□ -1.61
LMO3-227ENST00000541764 DMBT1Q9UGM3 2413 aaPredicted RBP5□□□□□ -1.61
LMO3-227ENST00000541764 KIAA1109Q2LD37 5005 aa4.98□□□□□ -1.61
LMO3-227ENST00000541764 K7ERS5 55 aa4.97□□□□□ -1.61
LMO3-227ENST00000541764 LINC01554Q52M75 96 aa4.93□□□□□ -1.62
LMO3-227ENST00000541764 CSAG1Q6PB30 78 aa4.93□□□□□ -1.62
LMO3-227ENST00000541764 KRTAP13-4Q3LI77 160 aa4.9□□□□□ -1.62
LMO3-227ENST00000541764 KRTAP25-1Q3LHN0 102 aa4.88□□□□□ -1.63
LMO3-227ENST00000541764 P0C880 135 aa4.87□□□□□ -1.63
LMO3-227ENST00000541764 LRP2P98164 4655 aa4.86□□□□□ -1.63
LMO3-227ENST00000541764 EPPK1P58107 5090 aaKnown RBP4.85□□□□□ -1.63
LMO3-227ENST00000541764 ROMO1P60602 79 aa4.85□□□□□ -1.63
LMO3-227ENST00000541764 M0QZ58 72 aa4.83□□□□□ -1.64
LMO3-227ENST00000541764 SEC61BP60468 96 aaKnown RBP4.82□□□□□ -1.64
LMO3-227ENST00000541764 LPAP08519 4548 aa4.8□□□□□ -1.64
LMO3-227ENST00000541764 A0A0D9SG42 100 aa4.79□□□□□ -1.64
LMO3-227ENST00000541764 MUC17Q685J3 4493 aa4.77□□□□□ -1.65
LMO3-227ENST00000541764 KRTAP12-1P59990 96 aa4.75□□□□□ -1.65
LMO3-227ENST00000541764 KRTAP12-2P59991 146 aa4.74□□□□□ -1.65
LMO3-227ENST00000541764 ABCA13Q86UQ4 5058 aa4.72□□□□□ -1.65
LMO3-227ENST00000541764 KRTAP19-2Q3LHN2 52 aa4.69□□□□□ -1.66
LMO3-227ENST00000541764 KRTAP4-1Q9BYQ7 146 aa4.68□□□□□ -1.66
LMO3-227ENST00000541764 HERC2O95714 4834 aa4.67□□□□□ -1.66
LMO3-227ENST00000541764 SPINT4Q6UDR6 99 aa4.65□□□□□ -1.66
LMO3-227ENST00000541764 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.64□□□□□ -1.67
LMO3-227ENST00000541764 CRIPTQ9P021 101 aa4.64□□□□□ -1.67
LMO3-227ENST00000541764 R4GN34 69 aa4.62□□□□□ -1.67
LMO3-227ENST00000541764 BIRC6Q9NR09 4857 aa4.62□□□□□ -1.67
LMO3-227ENST00000541764 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
LMO3-227ENST00000541764 FLGP20930 4061 aaPredicted RBP4.55□□□□□ -1.68
LMO3-227ENST00000541764 C10orf95Q9H7T3 257 aa4.55□□□□□ -1.68
LMO3-227ENST00000541764 HERC1Q15751 4861 aa4.53□□□□□ -1.68
LMO3-227ENST00000541764 A0A0A0MQY5 61 aa4.48□□□□□ -1.69
LMO3-227ENST00000541764 HMCN2Q8NDA2 5059 aa4.45□□□□□ -1.7
LMO3-227ENST00000541764 PP632Q6XCG6 107 aa4.4□□□□□ -1.71
LMO3-227ENST00000541764 KRTAP5-11Q6L8G4 156 aa4.37□□□□□ -1.71
LMO3-227ENST00000541764 CAMK2N1Q7Z7J9 78 aa4.37□□□□□ -1.71
LMO3-227ENST00000541764 PCLOQ9Y6V0 5065 aa4.36□□□□□ -1.71
LMO3-227ENST00000541764 SPRR2GQ9BYE4 73 aa4.33□□□□□ -1.72
LMO3-227ENST00000541764 KRTAP10-7P60409 375 aaPredicted RBP4.31□□□□□ -1.72
LMO3-227ENST00000541764 MUC2Q02817 5179 aa4.3□□□□□ -1.72
LMO3-227ENST00000541764 TNP1P09430 55 aa4.26□□□□□ -1.73
LMO3-227ENST00000541764 PLAC4Q8WY50 150 aa4.26□□□□□ -1.73
LMO3-227ENST00000541764 MT1HP80294 61 aa4.25□□□□□ -1.73
LMO3-227ENST00000541764 NDUFAF8A1L188 74 aa4.2□□□□□ -1.74
LMO3-227ENST00000541764 RNF213Q63HN8 5207 aa4.19□□□□□ -1.74
LMO3-227ENST00000541764 MT2AP02795 61 aa4.18□□□□□ -1.74
LMO3-227ENST00000541764 M0R2T5 61 aa4.18□□□□□ -1.74
LMO3-227ENST00000541764 KRTAP19-8Q3LI54 63 aa4.17□□□□□ -1.74
LMO3-227ENST00000541764 MT1FP04733 61 aa4.16□□□□□ -1.74
LMO3-227ENST00000541764 FAT4Q6V0I7 4981 aa4.15□□□□□ -1.75
LMO3-227ENST00000541764 KRTAP10-10P60014 251 aa4.12□□□□□ -1.75
LMO3-227ENST00000541764 SPRR5A0A1B0GTR4 108 aa4.08□□□□□ -1.76
LMO3-227ENST00000541764 UBR4Q5T4S7 5183 aa4.06□□□□□ -1.76
LMO3-227ENST00000541764 MT1BP07438 61 aa4.05□□□□□ -1.76
LMO3-227ENST00000541764 LUZP6Q538Z0 58 aa4.04□□□□□ -1.76
LMO3-227ENST00000541764 KRTAP10-5P60370 271 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms