RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 KRTAP3-3Q9BYR6 98 aa11.63□□□□□ -0.55
CHFR-218ENST00000540963 TP53AIP1Q9HCN2 124 aa11.63□□□□□ -0.55
CHFR-218ENST00000540963 F8W1H4 67 aa11.61□□□□□ -0.55
CHFR-218ENST00000540963 GTF2H5Q6ZYL4 71 aa11.58□□□□□ -0.56
CHFR-218ENST00000540963 SPRR2FQ96RM1 72 aa11.56□□□□□ -0.56
CHFR-218ENST00000540963 A0A087WVE0 104 aa11.55□□□□□ -0.56
CHFR-218ENST00000540963 SPRR2EP22531 72 aa11.55□□□□□ -0.56
CHFR-218ENST00000540963 SPRR2BP35325 72 aa11.55□□□□□ -0.56
CHFR-218ENST00000540963 SPRR2AP35326 72 aa11.55□□□□□ -0.56
CHFR-218ENST00000540963 CYP4F30PQ9H0H9 118 aa11.54□□□□□ -0.56
CHFR-218ENST00000540963 PCP4L1A6NKN8 68 aa11.47□□□□□ -0.57
CHFR-218ENST00000540963 KRTAP2-2Q9BYT5 123 aa11.45□□□□□ -0.58
CHFR-218ENST00000540963 KRTAP2-1Q9BYU5 128 aa11.45□□□□□ -0.58
CHFR-218ENST00000540963 PRO2289Q9P1D8 64 aa11.39□□□□□ -0.59
CHFR-218ENST00000540963 TRAV22A0A0B4J277 110 aa11.37□□□□□ -0.59
CHFR-218ENST00000540963 LOC101927531A0A1B0GV80 90 aa11.34□□□□□ -0.59
CHFR-218ENST00000540963 LCE1AQ5T7P2 110 aa11.33□□□□□ -0.6
CHFR-218ENST00000540963 KRTAP8-1Q8IUC2 63 aa11.31□□□□□ -0.6
CHFR-218ENST00000540963 ACYP1P07311 99 aa11.3□□□□□ -0.6
CHFR-218ENST00000540963 H0YAA0 97 aa11.28□□□□□ -0.6
CHFR-218ENST00000540963 FAM240AA0A1B0GVK7 77 aa11.26□□□□□ -0.61
CHFR-218ENST00000540963 MT1XP80297 61 aa11.25□□□□□ -0.61
CHFR-218ENST00000540963 UQCRQO14949 82 aa11.23□□□□□ -0.61
CHFR-218ENST00000540963 HIST1H4AP62805 103 aaKnown RBP11.21□□□□□ -0.61
CHFR-218ENST00000540963 ATP5EP2Q5VTU8 51 aa11.21□□□□□ -0.61
CHFR-218ENST00000540963 H0Y9P7 68 aa11.2□□□□□ -0.62
CHFR-218ENST00000540963 KRTAP12-2P59991 146 aa11.2□□□□□ -0.62
CHFR-218ENST00000540963 SPRR2DP22532 72 aa11.18□□□□□ -0.62
CHFR-218ENST00000540963 A8MUN3 132 aa11.17□□□□□ -0.62
CHFR-218ENST00000540963 NDUFC1O43677 76 aa11.13□□□□□ -0.63
CHFR-218ENST00000540963 ATOX1O00244 68 aa11.12□□□□□ -0.63
CHFR-218ENST00000540963 PLAC4Q8WY50 150 aa11.11□□□□□ -0.63
CHFR-218ENST00000540963 LINC00643Q86TS7 51 aa11.06□□□□□ -0.64
CHFR-218ENST00000540963 ADM2Q7Z4H4 148 aa11.03□□□□□ -0.64
CHFR-218ENST00000540963 LINC00208Q96KT6 92 aa11.02□□□□□ -0.65
CHFR-218ENST00000540963 OCR1Q9BZK8 76 aa11.01□□□□□ -0.65
CHFR-218ENST00000540963 KRTAP4-8A0A0G2JLE6 195 aa10.95□□□□□ -0.66
CHFR-218ENST00000540963 KRTAP4-8Q9BYQ9 185 aa10.95□□□□□ -0.66
CHFR-218ENST00000540963 LCE3BQ5TA77 95 aa10.94□□□□□ -0.66
CHFR-218ENST00000540963 A0A1B0GV90 55 aa10.88□□□□□ -0.67
CHFR-218ENST00000540963 R4GN34 69 aa10.85□□□□□ -0.67
CHFR-218ENST00000540963 MP68P56378 58 aa10.84□□□□□ -0.67
CHFR-218ENST00000540963 P0C880 135 aa10.83□□□□□ -0.68
CHFR-218ENST00000540963 KRTAP3-2Q9BYR7 98 aa10.77□□□□□ -0.69
CHFR-218ENST00000540963 C20orf197Q8N268 126 aa10.76□□□□□ -0.69
CHFR-218ENST00000540963 KRTAP10-12P60413 245 aa10.72□□□□□ -0.69
CHFR-218ENST00000540963 DMAC1Q96GE9 116 aa10.72□□□□□ -0.69
CHFR-218ENST00000540963 M0QZ58 72 aa10.7□□□□□ -0.7
CHFR-218ENST00000540963 GPR98Q8WXG9 6306 aa10.7□□□□□ -0.7
CHFR-218ENST00000540963 H3BPC8 53 aa10.69□□□□□ -0.7
CHFR-218ENST00000540963 KRTAP10-7P60409 375 aaPredicted RBP10.69□□□□□ -0.7
CHFR-218ENST00000540963 SCGB1A1P11684 91 aa10.54□□□□□ -0.72
CHFR-218ENST00000540963 LINC01554Q52M75 96 aa10.54□□□□□ -0.72
CHFR-218ENST00000540963 DSTQ03001 7570 aaKnown RBP10.52□□□□□ -0.72
CHFR-218ENST00000540963 J3QR89 54 aa10.51□□□□□ -0.73
CHFR-218ENST00000540963 TRAV7A0A075B6U4 112 aa10.43□□□□□ -0.74
CHFR-218ENST00000540963 MT-ATP8P03928 68 aa10.38□□□□□ -0.75
CHFR-218ENST00000540963 ACYP2P14621 99 aa10.35□□□□□ -0.75
CHFR-218ENST00000540963 KRTAP4-9Q9BYQ8 210 aa10.3□□□□□ -0.76
CHFR-218ENST00000540963 LCE5AQ5TCM9 118 aa10.24□□□□□ -0.77
CHFR-218ENST00000540963 SMIM20Q8N5G0 67 aa10.19□□□□□ -0.78
CHFR-218ENST00000540963 SPTSSBQ8NFR3 76 aa10.15□□□□□ -0.78
CHFR-218ENST00000540963 SNURFQ9Y675 71 aa10.15□□□□□ -0.78
CHFR-218ENST00000540963 K7ERU9 68 aa10.12□□□□□ -0.79
CHFR-218ENST00000540963 KRTAP13-4Q3LI77 160 aa10.1□□□□□ -0.79
CHFR-218ENST00000540963 KRTAP19-3Q7Z4W3 81 aa10.1□□□□□ -0.79
CHFR-218ENST00000540963 CHKB-CPT1BH3BT56 60 aa10.08□□□□□ -0.8
CHFR-218ENST00000540963 KRTAP19-7Q3SYF9 63 aa10.08□□□□□ -0.8
CHFR-218ENST00000540963 LCE1DQ5T752 114 aa10.04□□□□□ -0.8
CHFR-218ENST00000540963 MT1EP04732 61 aa10.02□□□□□ -0.81
CHFR-218ENST00000540963 SPANXA2-OT1Q8N9U9 137 aa10□□□□□ -0.81
CHFR-218ENST00000540963 CYSTM1Q9H1C7 97 aa9.91□□□□□ -0.82
CHFR-218ENST00000540963 LCE4AQ5TA78 99 aa9.9□□□□□ -0.82
CHFR-218ENST00000540963 HMCN1Q96RW7 5635 aa9.89□□□□□ -0.83
CHFR-218ENST00000540963 SERP2Q8N6R1 65 aa9.87□□□□□ -0.83
CHFR-218ENST00000540963 CAMK2N1Q7Z7J9 78 aa9.85□□□□□ -0.83
CHFR-218ENST00000540963 MT1GP13640 62 aa9.82□□□□□ -0.84
CHFR-218ENST00000540963 MT4P47944 62 aa9.79□□□□□ -0.84
CHFR-218ENST00000540963 AHNAK2Q8IVF2 5795 aa9.78□□□□□ -0.84
CHFR-218ENST00000540963 PP632Q6XCG6 107 aa9.75□□□□□ -0.85
CHFR-218ENST00000540963 COA5Q86WW8 74 aa9.75□□□□□ -0.85
CHFR-218ENST00000540963 KRTAP5-10Q6L8G5 202 aa9.69□□□□□ -0.86
CHFR-218ENST00000540963 A0A0D9SG42 100 aa9.62□□□□□ -0.87
CHFR-218ENST00000540963 SPATA8Q6RVD6 105 aa9.62□□□□□ -0.87
CHFR-218ENST00000540963 KRTAP19-5Q3LI72 72 aa9.61□□□□□ -0.87
CHFR-218ENST00000540963 KRTAP5-4Q6L8H1 288 aa9.59□□□□□ -0.87
CHFR-218ENST00000540963 MT1MQ8N339 61 aa9.59□□□□□ -0.87
CHFR-218ENST00000540963 COX7CP15954 63 aa9.52□□□□□ -0.89
CHFR-218ENST00000540963 SERP1Q9Y6X1 66 aa9.51□□□□□ -0.89
CHFR-218ENST00000540963 KRTAP12-1P59990 96 aa9.5□□□□□ -0.89
CHFR-218ENST00000540963 A0A1B0GU33 70 aa9.48□□□□□ -0.89
CHFR-218ENST00000540963 H7BZZ5 65 aa9.48□□□□□ -0.89
CHFR-218ENST00000540963 SEC61GP60059 68 aa9.48□□□□□ -0.89
CHFR-218ENST00000540963 SPINT4Q6UDR6 99 aa9.46□□□□□ -0.9
CHFR-218ENST00000540963 MT1LQ93083 61 aa9.46□□□□□ -0.9
CHFR-218ENST00000540963 KRTAP4-6Q9BYQ5 205 aa9.46□□□□□ -0.9
CHFR-218ENST00000540963 KRTAP5-7Q6L8G8 165 aa9.44□□□□□ -0.9
CHFR-218ENST00000540963 KRTAP5-3Q6L8H2 238 aa9.31□□□□□ -0.92
CHFR-218ENST00000540963 KRTAP4-3Q9BYR4 195 aa9.31□□□□□ -0.92
CHFR-218ENST00000540963 A8MU10 97 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms