RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 K7ERS5 55 aa6□□□□□ -1.45
CPT1A-206ENST00000540367 HSPG2P98160 4391 aa5.97□□□□□ -1.45
CPT1A-206ENST00000540367 MYCBP2O75592 4640 aa5.95□□□□□ -1.46
CPT1A-206ENST00000540367 A0A1B0GVY2 172 aa5.94□□□□□ -1.46
CPT1A-206ENST00000540367 COX6B2Q6YFQ2 88 aa5.93□□□□□ -1.46
CPT1A-206ENST00000540367 EPPK1P58107 5090 aaKnown RBP5.93□□□□□ -1.46
CPT1A-206ENST00000540367 KIAA1109Q2LD37 5005 aa5.93□□□□□ -1.46
CPT1A-206ENST00000540367 SEC61BP60468 96 aaKnown RBP5.91□□□□□ -1.46
CPT1A-206ENST00000540367 TNXBP22105 4242 aa5.89□□□□□ -1.47
CPT1A-206ENST00000540367 FLG2Q5D862 2391 aaPredicted RBP5.89□□□□□ -1.47
CPT1A-206ENST00000540367 KRTAP10-4P60372 401 aaPredicted RBP5.88□□□□□ -1.47
CPT1A-206ENST00000540367 KRTAP17-1Q9BYP8 105 aa5.87□□□□□ -1.47
CPT1A-206ENST00000540367 RYR1P21817 5038 aa5.86□□□□□ -1.47
CPT1A-206ENST00000540367 P0C880 135 aa5.85□□□□□ -1.47
CPT1A-206ENST00000540367 CRIPTQ9P021 101 aa5.85□□□□□ -1.47
CPT1A-206ENST00000540367 FAT3Q8TDW7 4589 aa5.84□□□□□ -1.47
CPT1A-206ENST00000540367 KRTAP10-6P60371 365 aaPredicted RBP5.81□□□□□ -1.48
CPT1A-206ENST00000540367 RPL37P61927 97 aaKnown RBP5.81□□□□□ -1.48
CPT1A-206ENST00000540367 DMBT1Q9UGM3 2413 aaPredicted RBP5.79□□□□□ -1.48
CPT1A-206ENST00000540367 BIRC6Q9NR09 4857 aa5.78□□□□□ -1.48
CPT1A-206ENST00000540367 KRTAP13-4Q3LI77 160 aa5.78□□□□□ -1.48
CPT1A-206ENST00000540367 LPAP08519 4548 aa5.75□□□□□ -1.49
CPT1A-206ENST00000540367 A0A0D9SG42 100 aa5.74□□□□□ -1.49
CPT1A-206ENST00000540367 SPINT4Q6UDR6 99 aa5.74□□□□□ -1.49
CPT1A-206ENST00000540367 ABCA13Q86UQ4 5058 aa5.73□□□□□ -1.49
CPT1A-206ENST00000540367 TPRXLQ17RH7 258 aa5.71□□□□□ -1.5
CPT1A-206ENST00000540367 S4R3F8 94 aa5.71□□□□□ -1.5
CPT1A-206ENST00000540367 Q5VSD8 79 aa5.7□□□□□ -1.5
CPT1A-206ENST00000540367 KRTAP10-8P60410 259 aa5.67□□□□□ -1.5
CPT1A-206ENST00000540367 NDUFAF8A1L188 74 aa5.66□□□□□ -1.5
CPT1A-206ENST00000540367 LRP2P98164 4655 aa5.65□□□□□ -1.51
CPT1A-206ENST00000540367 XP32Q5T750 250 aa5.63□□□□□ -1.51
CPT1A-206ENST00000540367 C10orf95Q9H7T3 257 aa5.63□□□□□ -1.51
CPT1A-206ENST00000540367 KRTAP15-1Q3LI76 137 aa5.62□□□□□ -1.51
CPT1A-206ENST00000540367 HERC2O95714 4834 aa5.62□□□□□ -1.51
CPT1A-206ENST00000540367 KRTAP12-2P59991 146 aa5.61□□□□□ -1.51
CPT1A-206ENST00000540367 KRTAP4-5Q9BYR2 181 aa5.59□□□□□ -1.51
CPT1A-206ENST00000540367 KRTAP23-1A1A580 65 aa5.58□□□□□ -1.52
CPT1A-206ENST00000540367 LCE2CQ5TA81 110 aa5.57□□□□□ -1.52
CPT1A-206ENST00000540367 KRTAP12-1P59990 96 aa5.56□□□□□ -1.52
CPT1A-206ENST00000540367 LUZP6Q538Z0 58 aa5.56□□□□□ -1.52
CPT1A-206ENST00000540367 LCE2AQ5TA79 106 aaPredicted RBP5.56□□□□□ -1.52
CPT1A-206ENST00000540367 MT1HL1P0DM35 61 aa5.53□□□□□ -1.52
CPT1A-206ENST00000540367 M0QZ58 72 aa5.49□□□□□ -1.53
CPT1A-206ENST00000540367 LCE2BO14633 110 aa5.46□□□□□ -1.54
CPT1A-206ENST00000540367 MUC2Q02817 5179 aa5.45□□□□□ -1.54
CPT1A-206ENST00000540367 PCLOQ9Y6V0 5065 aa5.43□□□□□ -1.54
CPT1A-206ENST00000540367 HERC1Q15751 4861 aa5.41□□□□□ -1.54
CPT1A-206ENST00000540367 R4GN34 69 aa5.3□□□□□ -1.56
CPT1A-206ENST00000540367 MUC17Q685J3 4493 aa5.3□□□□□ -1.56
CPT1A-206ENST00000540367 PLAC4Q8WY50 150 aa5.24□□□□□ -1.57
CPT1A-206ENST00000540367 LORP23490 312 aaPredicted RBP5.21□□□□□ -1.57
CPT1A-206ENST00000540367 KRTAP4-1Q9BYQ7 146 aa5.2□□□□□ -1.58
CPT1A-206ENST00000540367 FAT4Q6V0I7 4981 aa5.18□□□□□ -1.58
CPT1A-206ENST00000540367 HMCN2Q8NDA2 5059 aa5.16□□□□□ -1.58
CPT1A-206ENST00000540367 RNF213Q63HN8 5207 aa5.15□□□□□ -1.58
CPT1A-206ENST00000540367 PP632Q6XCG6 107 aa5.14□□□□□ -1.59
CPT1A-206ENST00000540367 UBR4Q5T4S7 5183 aa5.1□□□□□ -1.59
CPT1A-206ENST00000540367 CAMK2N1Q7Z7J9 78 aa5.05□□□□□ -1.6
CPT1A-206ENST00000540367 KRTAP19-2Q3LHN2 52 aa5.02□□□□□ -1.61
CPT1A-206ENST00000540367 FLGP20930 4061 aaPredicted RBP5□□□□□ -1.61
CPT1A-206ENST00000540367 TNP1P09430 55 aa4.9□□□□□ -1.63
CPT1A-206ENST00000540367 SPRR5A0A1B0GTR4 108 aa4.85□□□□□ -1.63
CPT1A-206ENST00000540367 PRO2289Q9P1D8 64 aa4.8□□□□□ -1.64
CPT1A-206ENST00000540367 SPRR2GQ9BYE4 73 aa4.69□□□□□ -1.66
CPT1A-206ENST00000540367 M0R2T5 61 aa4.66□□□□□ -1.66
CPT1A-206ENST00000540367 MT1HP80294 61 aa4.65□□□□□ -1.66
CPT1A-206ENST00000540367 KRTAP19-1Q8IUB9 90 aa4.65□□□□□ -1.67
CPT1A-206ENST00000540367 LCE3AQ5TA76 89 aa4.62□□□□□ -1.67
CPT1A-206ENST00000540367 INE1O15225 51 aa4.57□□□□□ -1.68
CPT1A-206ENST00000540367 MT1FP04733 61 aa4.56□□□□□ -1.68
CPT1A-206ENST00000540367 USH2AO75445 5202 aa4.56□□□□□ -1.68
CPT1A-206ENST00000540367 KRTAP10-10P60014 251 aa4.53□□□□□ -1.68
CPT1A-206ENST00000540367 MT2AP02795 61 aa4.53□□□□□ -1.68
CPT1A-206ENST00000540367 KRTAP8-1Q8IUC2 63 aa4.52□□□□□ -1.69
CPT1A-206ENST00000540367 KRTAP9-8Q9BYQ0 159 aa4.52□□□□□ -1.69
CPT1A-206ENST00000540367 KRTAP19-8Q3LI54 63 aa4.45□□□□□ -1.7
CPT1A-206ENST00000540367 KMT2DO14686 5537 aa4.41□□□□□ -1.7
CPT1A-206ENST00000540367 KRTAP10-5P60370 271 aa4.4□□□□□ -1.7
CPT1A-206ENST00000540367 MT1XP80297 61 aa4.39□□□□□ -1.71
CPT1A-206ENST00000540367 KRTAP12-3P60328 96 aa4.39□□□□□ -1.71
CPT1A-206ENST00000540367 MT1BP07438 61 aa4.38□□□□□ -1.71
CPT1A-206ENST00000540367 KRTAP10-12P60413 245 aa4.37□□□□□ -1.71
CPT1A-206ENST00000540367 FSIP2Q5CZC0 6907 aa4.34□□□□□ -1.71
CPT1A-206ENST00000540367 KRTAP9-6A0A140TA67 174 aa4.32□□□□□ -1.72
CPT1A-206ENST00000540367 KRTAP9-3Q9BYQ3 159 aa4.32□□□□□ -1.72
CPT1A-206ENST00000540367 KRTAP10-7P60409 375 aaPredicted RBP4.31□□□□□ -1.72
CPT1A-206ENST00000540367 KRTAP9-2Q9BYQ4 174 aa4.26□□□□□ -1.73
CPT1A-206ENST00000540367 LCE3CQ5T5A8 94 aa4.15□□□□□ -1.75
CPT1A-206ENST00000540367 SSPOA2VEC9 5147 aa4.14□□□□□ -1.75
CPT1A-206ENST00000540367 KRTAP19-5Q3LI72 72 aa4.14□□□□□ -1.75
CPT1A-206ENST00000540367 KRTAP4-8A0A0G2JLE6 195 aa4.11□□□□□ -1.75
CPT1A-206ENST00000540367 KRTAP4-8Q9BYQ9 185 aa4.11□□□□□ -1.75
CPT1A-206ENST00000540367 CRCT1Q9UGL9 99 aa4.06□□□□□ -1.76
CPT1A-206ENST00000540367 KRTAP19-4Q3LI73 84 aa4.03□□□□□ -1.76
CPT1A-206ENST00000540367 LCE5AQ5TCM9 118 aa4.03□□□□□ -1.76
CPT1A-206ENST00000540367 KRTAP9-6A8MVA2 160 aa4.01□□□□□ -1.77
CPT1A-206ENST00000540367 KRTAP4-7Q9BYR0 210 aa4□□□□□ -1.77
CPT1A-206ENST00000540367 KRTAP2-3P0C7H8 128 aa3.96□□□□□ -1.78
CPT1A-206ENST00000540367 KRTAP9-4Q9BYQ2 154 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms