RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 KRTAP10-6P60371 365 aaPredicted RBP7.22□□□□□ -1.25
SCNN1A-215ENST00000540037 HSPG2P98160 4391 aa7.22□□□□□ -1.25
SCNN1A-215ENST00000540037 LRP1Q07954 4544 aaKnown RBP7.21□□□□□ -1.25
SCNN1A-215ENST00000540037 KRTAP3-3Q9BYR6 98 aa7.21□□□□□ -1.26
SCNN1A-215ENST00000540037 MYCBP2O75592 4640 aa7.18□□□□□ -1.26
SCNN1A-215ENST00000540037 P0C880 135 aa7.16□□□□□ -1.26
SCNN1A-215ENST00000540037 FAT3Q8TDW7 4589 aa7.15□□□□□ -1.27
SCNN1A-215ENST00000540037 KRTAP10-8P60410 259 aa7.15□□□□□ -1.27
SCNN1A-215ENST00000540037 RPL37P61927 97 aaKnown RBP7.14□□□□□ -1.27
SCNN1A-215ENST00000540037 KRTAP3-2Q9BYR7 98 aa7.14□□□□□ -1.27
SCNN1A-215ENST00000540037 TPRXLQ17RH7 258 aa7.12□□□□□ -1.27
SCNN1A-215ENST00000540037 C10orf95Q9H7T3 257 aa7.12□□□□□ -1.27
SCNN1A-215ENST00000540037 A0A1B0GVY2 172 aa7.08□□□□□ -1.28
SCNN1A-215ENST00000540037 TNXBP22105 4242 aa7.07□□□□□ -1.28
SCNN1A-215ENST00000540037 S4R3F8 94 aa7.04□□□□□ -1.28
SCNN1A-215ENST00000540037 LPAP08519 4548 aa7.03□□□□□ -1.28
SCNN1A-215ENST00000540037 SPINT4Q6UDR6 99 aa7.01□□□□□ -1.29
SCNN1A-215ENST00000540037 KRTAP12-2P59991 146 aa7.01□□□□□ -1.29
SCNN1A-215ENST00000540037 KMT2CQ8NEZ4 4911 aaKnown RBP6.99□□□□□ -1.29
SCNN1A-215ENST00000540037 SEC61BP60468 96 aaKnown RBP6.99□□□□□ -1.29
SCNN1A-215ENST00000540037 XP32Q5T750 250 aa6.99□□□□□ -1.29
SCNN1A-215ENST00000540037 RYR2Q92736 4967 aa6.96□□□□□ -1.3
SCNN1A-215ENST00000540037 KRTAP12-1P59990 96 aa6.89□□□□□ -1.31
SCNN1A-215ENST00000540037 NDUFAF8A1L188 74 aa6.87□□□□□ -1.31
SCNN1A-215ENST00000540037 LRP2P98164 4655 aa6.87□□□□□ -1.31
SCNN1A-215ENST00000540037 KRTAP17-1Q9BYP8 105 aa6.84□□□□□ -1.31
SCNN1A-215ENST00000540037 KRTAP15-1Q3LI76 137 aa6.84□□□□□ -1.31
SCNN1A-215ENST00000540037 Q5VSD8 79 aa6.84□□□□□ -1.31
SCNN1A-215ENST00000540037 KIAA1109Q2LD37 5005 aa6.73□□□□□ -1.33
SCNN1A-215ENST00000540037 RYR1P21817 5038 aa6.72□□□□□ -1.33
SCNN1A-215ENST00000540037 MT1HL1P0DM35 61 aa6.7□□□□□ -1.34
SCNN1A-215ENST00000540037 RYR3Q15413 4870 aa6.69□□□□□ -1.34
SCNN1A-215ENST00000540037 M0QZ58 72 aa6.68□□□□□ -1.34
SCNN1A-215ENST00000540037 ABCA13Q86UQ4 5058 aa6.66□□□□□ -1.34
SCNN1A-215ENST00000540037 KRTAP21-3Q3LHN1 58 aa6.62□□□□□ -1.35
SCNN1A-215ENST00000540037 LORP23490 312 aaPredicted RBP6.59□□□□□ -1.35
SCNN1A-215ENST00000540037 R4GN34 69 aa6.58□□□□□ -1.36
SCNN1A-215ENST00000540037 EPPK1P58107 5090 aaKnown RBP6.46□□□□□ -1.38
SCNN1A-215ENST00000540037 LUZP6Q538Z0 58 aa6.46□□□□□ -1.38
SCNN1A-215ENST00000540037 MUC17Q685J3 4493 aa6.44□□□□□ -1.38
SCNN1A-215ENST00000540037 PLAC4Q8WY50 150 aa6.43□□□□□ -1.38
SCNN1A-215ENST00000540037 KRTAP4-1Q9BYQ7 146 aa6.4□□□□□ -1.38
SCNN1A-215ENST00000540037 KRTAP4-5Q9BYR2 181 aa6.39□□□□□ -1.39
SCNN1A-215ENST00000540037 MUC2Q02817 5179 aa6.37□□□□□ -1.39
SCNN1A-215ENST00000540037 CAMK2N1Q7Z7J9 78 aa6.28□□□□□ -1.4
SCNN1A-215ENST00000540037 KRTAP19-2Q3LHN2 52 aa6.24□□□□□ -1.41
SCNN1A-215ENST00000540037 PP632Q6XCG6 107 aa6.15□□□□□ -1.43
SCNN1A-215ENST00000540037 KRTAP23-1A1A580 65 aa6.14□□□□□ -1.43
SCNN1A-215ENST00000540037 PCLOQ9Y6V0 5065 aa6.12□□□□□ -1.43
SCNN1A-215ENST00000540037 HERC2O95714 4834 aa6.08□□□□□ -1.44
SCNN1A-215ENST00000540037 FLGP20930 4061 aaPredicted RBP6.06□□□□□ -1.44
SCNN1A-215ENST00000540037 FAT4Q6V0I7 4981 aa6.01□□□□□ -1.45
SCNN1A-215ENST00000540037 TNP1P09430 55 aa6.01□□□□□ -1.45
SCNN1A-215ENST00000540037 BIRC6Q9NR09 4857 aa5.9□□□□□ -1.46
SCNN1A-215ENST00000540037 HERC1Q15751 4861 aa5.9□□□□□ -1.47
SCNN1A-215ENST00000540037 SPRR5A0A1B0GTR4 108 aa5.89□□□□□ -1.47
SCNN1A-215ENST00000540037 LCE2DQ5TA82 110 aaPredicted RBP5.8□□□□□ -1.48
SCNN1A-215ENST00000540037 KRTAP19-1Q8IUB9 90 aa5.79□□□□□ -1.48
SCNN1A-215ENST00000540037 LCE2CQ5TA81 110 aa5.77□□□□□ -1.49
SCNN1A-215ENST00000540037 LCE3AQ5TA76 89 aa5.77□□□□□ -1.49
SCNN1A-215ENST00000540037 RNF213Q63HN8 5207 aa5.76□□□□□ -1.49
SCNN1A-215ENST00000540037 SPRR2GQ9BYE4 73 aa5.74□□□□□ -1.49
SCNN1A-215ENST00000540037 HMCN2Q8NDA2 5059 aa5.74□□□□□ -1.49
SCNN1A-215ENST00000540037 M0R2T5 61 aa5.68□□□□□ -1.5
SCNN1A-215ENST00000540037 UBR4Q5T4S7 5183 aa5.68□□□□□ -1.5
SCNN1A-215ENST00000540037 LCE2AQ5TA79 106 aaPredicted RBP5.66□□□□□ -1.5
SCNN1A-215ENST00000540037 MT1FP04733 61 aa5.61□□□□□ -1.51
SCNN1A-215ENST00000540037 KRTAP10-10P60014 251 aa5.59□□□□□ -1.51
SCNN1A-215ENST00000540037 MT1HP80294 61 aa5.59□□□□□ -1.51
SCNN1A-215ENST00000540037 MT2AP02795 61 aa5.57□□□□□ -1.52
SCNN1A-215ENST00000540037 KRTAP8-1Q8IUC2 63 aa5.51□□□□□ -1.53
SCNN1A-215ENST00000540037 KRTAP9-8Q9BYQ0 159 aa5.5□□□□□ -1.53
SCNN1A-215ENST00000540037 KRTAP10-5P60370 271 aa5.49□□□□□ -1.53
SCNN1A-215ENST00000540037 MT1XP80297 61 aa5.47□□□□□ -1.53
SCNN1A-215ENST00000540037 MT1BP07438 61 aa5.45□□□□□ -1.54
SCNN1A-215ENST00000540037 LCE2BO14633 110 aa5.44□□□□□ -1.54
SCNN1A-215ENST00000540037 KRTAP12-3P60328 96 aa5.43□□□□□ -1.54
SCNN1A-215ENST00000540037 KRTAP19-8Q3LI54 63 aa5.42□□□□□ -1.54
SCNN1A-215ENST00000540037 KRTAP10-7P60409 375 aaPredicted RBP5.4□□□□□ -1.54
SCNN1A-215ENST00000540037 KRTAP10-12P60413 245 aa5.4□□□□□ -1.54
SCNN1A-215ENST00000540037 PRO2289Q9P1D8 64 aa5.4□□□□□ -1.55
SCNN1A-215ENST00000540037 KMT2DO14686 5537 aa5.31□□□□□ -1.56
SCNN1A-215ENST00000540037 INE1O15225 51 aa5.28□□□□□ -1.56
SCNN1A-215ENST00000540037 USH2AO75445 5202 aa5.27□□□□□ -1.57
SCNN1A-215ENST00000540037 KRTAP9-3Q9BYQ3 159 aa5.24□□□□□ -1.57
SCNN1A-215ENST00000540037 KRTAP19-5Q3LI72 72 aa5.18□□□□□ -1.58
SCNN1A-215ENST00000540037 LCE3CQ5T5A8 94 aa5.12□□□□□ -1.59
SCNN1A-215ENST00000540037 KRTAP4-8A0A0G2JLE6 195 aa5.08□□□□□ -1.6
SCNN1A-215ENST00000540037 KRTAP4-8Q9BYQ9 185 aa5.08□□□□□ -1.6
SCNN1A-215ENST00000540037 KRTAP9-6A8MVA2 160 aa5.07□□□□□ -1.6
SCNN1A-215ENST00000540037 KRTAP4-7Q9BYR0 210 aa5□□□□□ -1.61
SCNN1A-215ENST00000540037 KRTAP19-7Q3SYF9 63 aa4.88□□□□□ -1.63
SCNN1A-215ENST00000540037 KRTAP2-3P0C7H8 128 aa4.84□□□□□ -1.63
SCNN1A-215ENST00000540037 KRTAP2-4Q9BYR9 128 aa4.84□□□□□ -1.63
SCNN1A-215ENST00000540037 KRTAP2-1Q9BYU5 128 aa4.84□□□□□ -1.63
SCNN1A-215ENST00000540037 MT1LQ93083 61 aa4.73□□□□□ -1.65
SCNN1A-215ENST00000540037 MT1EP04732 61 aa4.69□□□□□ -1.66
SCNN1A-215ENST00000540037 FSIP2Q5CZC0 6907 aa4.65□□□□□ -1.66
SCNN1A-215ENST00000540037 LOC100996750A0A140TA64 210 aa4.65□□□□□ -1.67
SCNN1A-215ENST00000540037 KRTAP4-3Q9BYR4 195 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms