RNA–Protein interactions for RNA: ENST00000539276.6

ATP2A2-204, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-204ENST00000539276 SEC61BP60468 96 aaKnown RBP7.92□□□□□ -1.14
ATP2A2-204ENST00000539276 KRTAP10-6P60371 365 aaPredicted RBP7.9□□□□□ -1.14
ATP2A2-204ENST00000539276 NDUFAF8A1L188 74 aa7.9□□□□□ -1.15
ATP2A2-204ENST00000539276 VPS13BQ7Z7G8 4022 aa7.89□□□□□ -1.15
ATP2A2-204ENST00000539276 DYNC2H1Q8NCM8 4307 aaKnown RBP7.88□□□□□ -1.15
ATP2A2-204ENST00000539276 KRTAP10-4P60372 401 aaPredicted RBP7.87□□□□□ -1.15
ATP2A2-204ENST00000539276 KRTAP12-2P59991 146 aa7.84□□□□□ -1.15
ATP2A2-204ENST00000539276 TPRXLQ17RH7 258 aa7.81□□□□□ -1.16
ATP2A2-204ENST00000539276 KRTAP3-3Q9BYR6 98 aa7.8□□□□□ -1.16
ATP2A2-204ENST00000539276 ALMS1Q8TCU4 4167 aa7.8□□□□□ -1.16
ATP2A2-204ENST00000539276 DYNC1H1Q14204 4646 aaKnown RBP7.79□□□□□ -1.16
ATP2A2-204ENST00000539276 LUZP6Q538Z0 58 aa7.77□□□□□ -1.17
ATP2A2-204ENST00000539276 KRTAP3-2Q9BYR7 98 aa7.75□□□□□ -1.17
ATP2A2-204ENST00000539276 KRTAP12-1P59990 96 aa7.72□□□□□ -1.17
ATP2A2-204ENST00000539276 MYCBP2O75592 4640 aa7.71□□□□□ -1.18
ATP2A2-204ENST00000539276 HYDINQ4G0P3 5121 aa7.69□□□□□ -1.18
ATP2A2-204ENST00000539276 SACSQ9NZJ4 4579 aa7.65□□□□□ -1.19
ATP2A2-204ENST00000539276 PKHD1P08F94 4074 aa7.62□□□□□ -1.19
ATP2A2-204ENST00000539276 M0R2T5 61 aa7.6□□□□□ -1.19
ATP2A2-204ENST00000539276 MT1HL1P0DM35 61 aa7.58□□□□□ -1.2
ATP2A2-204ENST00000539276 LRP1Q07954 4544 aaKnown RBP7.54□□□□□ -1.2
ATP2A2-204ENST00000539276 FAT2Q9NYQ8 4349 aa7.53□□□□□ -1.2
ATP2A2-204ENST00000539276 PLAC4Q8WY50 150 aa7.51□□□□□ -1.21
ATP2A2-204ENST00000539276 APOBP04114 4563 aaKnown RBP7.45□□□□□ -1.22
ATP2A2-204ENST00000539276 FAT3Q8TDW7 4589 aa7.41□□□□□ -1.22
ATP2A2-204ENST00000539276 PKD1P98161 4303 aa7.4□□□□□ -1.23
ATP2A2-204ENST00000539276 A0A0A0MQY5 61 aa7.38□□□□□ -1.23
ATP2A2-204ENST00000539276 TNP1P09430 55 aa7.37□□□□□ -1.23
ATP2A2-204ENST00000539276 KIAA1109Q2LD37 5005 aa7.37□□□□□ -1.23
ATP2A2-204ENST00000539276 RYR1P21817 5038 aa7.37□□□□□ -1.23
ATP2A2-204ENST00000539276 KRTAP15-1Q3LI76 137 aa7.33□□□□□ -1.24
ATP2A2-204ENST00000539276 KRTAP4-5Q9BYR2 181 aa7.33□□□□□ -1.24
ATP2A2-204ENST00000539276 PP632Q6XCG6 107 aa7.32□□□□□ -1.24
ATP2A2-204ENST00000539276 LORP23490 312 aaPredicted RBP7.26□□□□□ -1.25
ATP2A2-204ENST00000539276 RYR3Q15413 4870 aa7.24□□□□□ -1.25
ATP2A2-204ENST00000539276 LRP2P98164 4655 aa7.21□□□□□ -1.26
ATP2A2-204ENST00000539276 KRTAP17-1Q9BYP8 105 aa7.2□□□□□ -1.26
ATP2A2-204ENST00000539276 KMT2CQ8NEZ4 4911 aaKnown RBP7.17□□□□□ -1.26
ATP2A2-204ENST00000539276 RYR2Q92736 4967 aa7.17□□□□□ -1.26
ATP2A2-204ENST00000539276 HSPG2P98160 4391 aa7.16□□□□□ -1.26
ATP2A2-204ENST00000539276 KRTAP4-1Q9BYQ7 146 aa7.06□□□□□ -1.28
ATP2A2-204ENST00000539276 PKHD1L1Q86WI1 4243 aa7.04□□□□□ -1.28
ATP2A2-204ENST00000539276 KRTAP10-10P60014 251 aa7.02□□□□□ -1.29
ATP2A2-204ENST00000539276 LPAP08519 4548 aa6.94□□□□□ -1.3
ATP2A2-204ENST00000539276 TNXBP22105 4242 aa6.93□□□□□ -1.3
ATP2A2-204ENST00000539276 HERC2O95714 4834 aa6.72□□□□□ -1.33
ATP2A2-204ENST00000539276 EPPK1P58107 5090 aaKnown RBP6.66□□□□□ -1.34
ATP2A2-204ENST00000539276 ABCA13Q86UQ4 5058 aa6.64□□□□□ -1.35
ATP2A2-204ENST00000539276 LCE3AQ5TA76 89 aa6.6□□□□□ -1.35
ATP2A2-204ENST00000539276 KRTAP23-1A1A580 65 aa6.53□□□□□ -1.36
ATP2A2-204ENST00000539276 PRO2289Q9P1D8 64 aa6.53□□□□□ -1.36
ATP2A2-204ENST00000539276 MUC2Q02817 5179 aa6.49□□□□□ -1.37
ATP2A2-204ENST00000539276 KRTAP10-12P60413 245 aa6.43□□□□□ -1.38
ATP2A2-204ENST00000539276 SPRR2GQ9BYE4 73 aa6.43□□□□□ -1.38
ATP2A2-204ENST00000539276 KRTAP19-2Q3LHN2 52 aa6.42□□□□□ -1.38
ATP2A2-204ENST00000539276 MT1HP80294 61 aa6.4□□□□□ -1.39
ATP2A2-204ENST00000539276 KRTAP12-3P60328 96 aa6.39□□□□□ -1.39
ATP2A2-204ENST00000539276 MT2AP02795 61 aa6.36□□□□□ -1.39
ATP2A2-204ENST00000539276 KRTAP19-1Q8IUB9 90 aa6.36□□□□□ -1.39
ATP2A2-204ENST00000539276 MT1FP04733 61 aa6.36□□□□□ -1.39
ATP2A2-204ENST00000539276 MUC17Q685J3 4493 aa6.36□□□□□ -1.39
ATP2A2-204ENST00000539276 FAT4Q6V0I7 4981 aa6.29□□□□□ -1.4
ATP2A2-204ENST00000539276 FLGP20930 4061 aaPredicted RBP6.28□□□□□ -1.4
ATP2A2-204ENST00000539276 HERC1Q15751 4861 aa6.26□□□□□ -1.41
ATP2A2-204ENST00000539276 LCE2CQ5TA81 110 aa6.24□□□□□ -1.41
ATP2A2-204ENST00000539276 BIRC6Q9NR09 4857 aa6.19□□□□□ -1.42
ATP2A2-204ENST00000539276 KRTAP8-1Q8IUC2 63 aa6.15□□□□□ -1.43
ATP2A2-204ENST00000539276 RNF213Q63HN8 5207 aa6.14□□□□□ -1.43
ATP2A2-204ENST00000539276 SPRR5A0A1B0GTR4 108 aa6.12□□□□□ -1.43
ATP2A2-204ENST00000539276 PCLOQ9Y6V0 5065 aa6.11□□□□□ -1.43
ATP2A2-204ENST00000539276 INE1O15225 51 aa6.11□□□□□ -1.43
ATP2A2-204ENST00000539276 KRTAP9-8Q9BYQ0 159 aa6.07□□□□□ -1.44
ATP2A2-204ENST00000539276 KRTAP19-8Q3LI54 63 aa6.04□□□□□ -1.44
ATP2A2-204ENST00000539276 KRTAP10-7P60409 375 aaPredicted RBP6.04□□□□□ -1.44
ATP2A2-204ENST00000539276 MT1XP80297 61 aa6.04□□□□□ -1.44
ATP2A2-204ENST00000539276 MT1BP07438 61 aa6.02□□□□□ -1.45
ATP2A2-204ENST00000539276 KRTAP10-5P60370 271 aa6.02□□□□□ -1.45
ATP2A2-204ENST00000539276 HMCN2Q8NDA2 5059 aa6.01□□□□□ -1.45
ATP2A2-204ENST00000539276 UBR4Q5T4S7 5183 aa5.96□□□□□ -1.46
ATP2A2-204ENST00000539276 KRTAP19-5Q3LI72 72 aa5.94□□□□□ -1.46
ATP2A2-204ENST00000539276 KRTAP9-3Q9BYQ3 159 aa5.82□□□□□ -1.48
ATP2A2-204ENST00000539276 LCE3CQ5T5A8 94 aa5.81□□□□□ -1.48
ATP2A2-204ENST00000539276 CRCT1Q9UGL9 99 aa5.79□□□□□ -1.48
ATP2A2-204ENST00000539276 KRTAP4-8A0A0G2JLE6 195 aa5.75□□□□□ -1.49
ATP2A2-204ENST00000539276 KRTAP4-8Q9BYQ9 185 aa5.75□□□□□ -1.49
ATP2A2-204ENST00000539276 LCE2BO14633 110 aa5.64□□□□□ -1.51
ATP2A2-204ENST00000539276 FSIP2Q5CZC0 6907 aa5.61□□□□□ -1.51
ATP2A2-204ENST00000539276 KRTAP4-7Q9BYR0 210 aa5.55□□□□□ -1.52
ATP2A2-204ENST00000539276 USH2AO75445 5202 aa5.54□□□□□ -1.52
ATP2A2-204ENST00000539276 KMT2DO14686 5537 aa5.49□□□□□ -1.53
ATP2A2-204ENST00000539276 MT1LQ93083 61 aa5.3□□□□□ -1.56
ATP2A2-204ENST00000539276 KRTAP19-7Q3SYF9 63 aa5.29□□□□□ -1.56
ATP2A2-204ENST00000539276 MT1GP13640 62 aa5.29□□□□□ -1.56
ATP2A2-204ENST00000539276 KRTAP9-6A8MVA2 160 aa5.28□□□□□ -1.56
ATP2A2-204ENST00000539276 MT1EP04732 61 aa5.26□□□□□ -1.57
ATP2A2-204ENST00000539276 KRTAP19-4Q3LI73 84 aa5.24□□□□□ -1.57
ATP2A2-204ENST00000539276 SPRR2FQ96RM1 72 aa5.22□□□□□ -1.57
ATP2A2-204ENST00000539276 LCE2AQ5TA79 106 aaPredicted RBP5.22□□□□□ -1.57
ATP2A2-204ENST00000539276 SYNE1Q8NF91 8797 aaKnown RBP5.2□□□□□ -1.58
ATP2A2-204ENST00000539276 DSTQ03001 7570 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms