RNA–Protein interactions for RNA: ENST00000539004.5

FAM60A-205, Transcript of Protein FAM60A, humanhuman

TSL 5

Gene FAM60A, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-205ENST00000539004 CELSR3Q9NYQ7 3312 aa0.16□□□□□ -2.38
FAM60A-205ENST00000539004 APOBP04114 4563 aaKnown RBP0.16□□□□□ -2.38
FAM60A-205ENST00000539004 FAT3Q8TDW7 4589 aa0.16□□□□□ -2.38
FAM60A-205ENST00000539004 FRYQ5TBA9 3013 aa0.16□□□□□ -2.38
FAM60A-205ENST00000539004 KRTAP19-5Q3LI72 72 aa0.16□□□□□ -2.38
FAM60A-205ENST00000539004 DNAH9Q9NYC9 4486 aa0.16□□□□□ -2.38
FAM60A-205ENST00000539004 USP9XQ93008 2570 aaPredicted RBP0.16□□□□□ -2.38
FAM60A-205ENST00000539004 NBEAQ8NFP9 2946 aa0.16□□□□□ -2.38
FAM60A-205ENST00000539004 LRP1BQ9NZR2 4599 aa0.15□□□□□ -2.38
FAM60A-205ENST00000539004 MGAQ8IWI9 3026 aa0.15□□□□□ -2.39
FAM60A-205ENST00000539004 UTP20O75691 2785 aaKnown RBP0.15□□□□□ -2.39
FAM60A-205ENST00000539004 SPRR2AP35326 72 aa0.15□□□□□ -2.39
FAM60A-205ENST00000539004 KRTAP6-2Q3LI66 62 aa0.15□□□□□ -2.39
FAM60A-205ENST00000539004 SPRR2GQ9BYE4 73 aa0.15□□□□□ -2.39
FAM60A-205ENST00000539004 SVEP1Q4LDE5 3571 aa0.15□□□□□ -2.39
FAM60A-205ENST00000539004 DNAH6Q9C0G6 4158 aa0.15□□□□□ -2.39
FAM60A-205ENST00000539004 TGP01266 2768 aa0.15□□□□□ -2.39
FAM60A-205ENST00000539004 MAP1AP78559 2803 aaPredicted RBP0.14□□□□□ -2.39
FAM60A-205ENST00000539004 COL6A3P12111 3177 aa0.14□□□□□ -2.39
FAM60A-205ENST00000539004 AKAP9Q99996 3911 aa0.14□□□□□ -2.39
FAM60A-205ENST00000539004 RELNP78509 3460 aa0.14□□□□□ -2.39
FAM60A-205ENST00000539004 RANBP2P49792 3224 aaKnown RBP0.14□□□□□ -2.39
FAM60A-205ENST00000539004 ITPR1Q14643 2758 aa0.14□□□□□ -2.39
FAM60A-205ENST00000539004 DNAH10Q8IVF4 4471 aa0.14□□□□□ -2.39
FAM60A-205ENST00000539004 CEP250Q9BV73 2442 aa0.14□□□□□ -2.39
FAM60A-205ENST00000539004 FASNP49327 2511 aaKnown RBP0.14□□□□□ -2.39
FAM60A-205ENST00000539004 SPTBN5Q9NRC6 3674 aaKnown RBP0.14□□□□□ -2.39
FAM60A-205ENST00000539004 FLNAP21333 2647 aaKnown RBP0.13□□□□□ -2.39
FAM60A-205ENST00000539004 SMR3BP02814 79 aaPredicted RBP0.13□□□□□ -2.39
FAM60A-205ENST00000539004 TNP1P09430 55 aa0.13□□□□□ -2.39
FAM60A-205ENST00000539004 SPRR2EP22531 72 aa0.13□□□□□ -2.39
FAM60A-205ENST00000539004 LEAP2Q969E1 77 aa0.13□□□□□ -2.39
FAM60A-205ENST00000539004 DNAH1Q9P2D7 4330 aa0.13□□□□□ -2.39
FAM60A-205ENST00000539004 CSMD1Q96PZ7 3565 aa0.13□□□□□ -2.39
FAM60A-205ENST00000539004 LAMA3Q16787 3333 aa0.13□□□□□ -2.39
FAM60A-205ENST00000539004 MXRA5Q9NR99 2828 aa0.13□□□□□ -2.39
FAM60A-205ENST00000539004 H0YGG7 62 aa0.12□□□□□ -2.39
FAM60A-205ENST00000539004 PRCDQ00LT1 54 aa0.12□□□□□ -2.39
FAM60A-205ENST00000539004 SPRR2FQ96RM1 72 aa0.12□□□□□ -2.39
FAM60A-205ENST00000539004 STAB2Q8WWQ8 2551 aa0.12□□□□□ -2.39
FAM60A-205ENST00000539004 KALRNO60229 2985 aa0.12□□□□□ -2.39
FAM60A-205ENST00000539004 PLECQ15149 4684 aaKnown RBP0.11□□□□□ -2.39
FAM60A-205ENST00000539004 K7EIM0 57 aa0.11□□□□□ -2.39
FAM60A-205ENST00000539004 LRBAP50851 2863 aa0.11□□□□□ -2.39
FAM60A-205ENST00000539004 WDR87Q6ZQQ6 2873 aa0.11□□□□□ -2.39
FAM60A-205ENST00000539004 DMXL2Q8TDJ6 3036 aa0.11□□□□□ -2.39
FAM60A-205ENST00000539004 LAMA1P25391 3075 aa0.1□□□□□ -2.39
FAM60A-205ENST00000539004 FAT1Q14517 4588 aa0.1□□□□□ -2.39
FAM60A-205ENST00000539004 LRP2P98164 4655 aa0.1□□□□□ -2.39
FAM60A-205ENST00000539004 SMG1Q96Q15 3661 aaKnown RBP0.1□□□□□ -2.39
FAM60A-205ENST00000539004 DNAH17Q9UFH2 4485 aa0.1□□□□□ -2.39
FAM60A-205ENST00000539004 HERC1Q15751 4861 aa0.1□□□□□ -2.39
FAM60A-205ENST00000539004 DSTQ03001 7570 aaKnown RBP0.1□□□□□ -2.39
FAM60A-205ENST00000539004 TRRAPQ9Y4A5 3859 aa0.1□□□□□ -2.39
FAM60A-205ENST00000539004 TEX15Q9BXT5 2789 aa0.09□□□□□ -2.39
FAM60A-205ENST00000539004 ATMQ13315 3056 aa0.09□□□□□ -2.39
FAM60A-205ENST00000539004 H3BNG1 76 aa0.09□□□□□ -2.4
FAM60A-205ENST00000539004 TTTY10Q9BZA0 68 aa0.09□□□□□ -2.4
FAM60A-205ENST00000539004 TOMM7Q9P0U1 55 aa0.09□□□□□ -2.4
FAM60A-205ENST00000539004 CFAP54Q96N23 3096 aa0.09□□□□□ -2.4
FAM60A-205ENST00000539004 MGAM2Q2M2H8 2515 aa0.09□□□□□ -2.4
FAM60A-205ENST00000539004 NIPBLQ6KC79 2804 aaeCLIP0.09□□□□□ -2.4
FAM60A-205ENST00000539004 CMYA5Q8N3K9 4069 aa0.08□□□□□ -2.4
FAM60A-205ENST00000539004 DNAH5Q8TE73 4624 aa0.08□□□□□ -2.4
FAM60A-205ENST00000539004 SPTAN1Q13813 2472 aaKnown RBP0.08□□□□□ -2.4
FAM60A-205ENST00000539004 C5orf42Q9H799 3197 aa0.08□□□□□ -2.4
FAM60A-205ENST00000539004 ITPR2Q14571 2701 aa0.07□□□□□ -2.4
FAM60A-205ENST00000539004 ADGRG4Q8IZF6 3080 aa0.07□□□□□ -2.4
FAM60A-205ENST00000539004 DOPEY1Q5JWR5 2465 aa0.07□□□□□ -2.4
FAM60A-205ENST00000539004 TMEM167AQ8TBQ9 72 aa0.07□□□□□ -2.4
FAM60A-205ENST00000539004 DNAH12Q6ZR08 3092 aa0.07□□□□□ -2.4
FAM60A-205ENST00000539004 DYNC1H1Q14204 4646 aaKnown RBP0.07□□□□□ -2.4
FAM60A-205ENST00000539004 DMDP11532 3685 aa0.07□□□□□ -2.4
FAM60A-205ENST00000539004 HTTP42858 3142 aa0.07□□□□□ -2.4
FAM60A-205ENST00000539004 NBEAL1Q6ZS30 2694 aa0.06□□□□□ -2.4
FAM60A-205ENST00000539004 VPS13CQ709C8 3753 aa0.06□□□□□ -2.4
FAM60A-205ENST00000539004 DEFB110Q30KQ9 67 aa0.06□□□□□ -2.4
FAM60A-205ENST00000539004 DEFB104AQ8WTQ1 72 aa0.06□□□□□ -2.4
FAM60A-205ENST00000539004 MUC17Q685J3 4493 aa0.06□□□□□ -2.4
FAM60A-205ENST00000539004 MT1EP04732 61 aa0.05□□□□□ -2.4
FAM60A-205ENST00000539004 MT1HP80294 61 aa0.05□□□□□ -2.4
FAM60A-205ENST00000539004 CFAP46Q8IYW2 2715 aa0.05□□□□□ -2.4
FAM60A-205ENST00000539004 TRIOO75962 3097 aa0.04□□□□□ -2.4
FAM60A-205ENST00000539004 TLN1Q9Y490 2541 aaKnown RBP0.04□□□□□ -2.4
FAM60A-205ENST00000539004 H3BSH0 61 aa0.04□□□□□ -2.4
FAM60A-205ENST00000539004 PCLOQ9Y6V0 5065 aa0.04□□□□□ -2.4
FAM60A-205ENST00000539004 CSMD2Q7Z408 3487 aa0.04□□□□□ -2.4
FAM60A-205ENST00000539004 KMT2CQ8NEZ4 4911 aaKnown RBP0.04□□□□□ -2.4
FAM60A-205ENST00000539004 FRYLO94915 3013 aa0.03□□□□□ -2.4
FAM60A-205ENST00000539004 SPART-AS1P0CW21 52 aa0.03□□□□□ -2.4
FAM60A-205ENST00000539004 MT1LQ93083 61 aa0.03□□□□□ -2.4
FAM60A-205ENST00000539004 PRUNE2Q8WUY3 3088 aa0.03□□□□□ -2.4
FAM60A-205ENST00000539004 CEP295Q9C0D2 2601 aa0.02□□□□□ -2.41
FAM60A-205ENST00000539004 DNHD1Q96M86 4753 aa0.02□□□□□ -2.41
FAM60A-205ENST00000539004 MYO9AB2RTY4 2548 aa0.02□□□□□ -2.41
FAM60A-205ENST00000539004 DEFB124Q8NES8 71 aa0.02□□□□□ -2.41
FAM60A-205ENST00000539004 UBR4Q5T4S7 5183 aa0.01□□□□□ -2.41
FAM60A-205ENST00000539004 STARD9Q9P2P6 4700 aa0.01□□□□□ -2.41
FAM60A-205ENST00000539004 MUC2Q02817 5179 aa0.01□□□□□ -2.41
FAM60A-205ENST00000539004 USH2AO75445 5202 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms