RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 ATOX1O00244 68 aa6.71□□□□□ -1.34
RAB40B-202ENST00000538809 Q5VV11 94 aa6.71□□□□□ -1.34
RAB40B-202ENST00000538809 KLKP1Q107X0 134 aa6.7□□□□□ -1.34
RAB40B-202ENST00000538809 KRTAP19-8Q3LI54 63 aa6.69□□□□□ -1.34
RAB40B-202ENST00000538809 KRTAP6-3Q3LI67 103 aa6.68□□□□□ -1.34
RAB40B-202ENST00000538809 A6NN06 94 aa6.67□□□□□ -1.34
RAB40B-202ENST00000538809 OCR1Q9BZK8 76 aa6.65□□□□□ -1.34
RAB40B-202ENST00000538809 LINC00208Q96KT6 92 aa6.61□□□□□ -1.35
RAB40B-202ENST00000538809 A8MUN3 132 aa6.59□□□□□ -1.35
RAB40B-202ENST00000538809 H0YAA0 97 aa6.58□□□□□ -1.36
RAB40B-202ENST00000538809 KRTAP10-5P60370 271 aa6.58□□□□□ -1.36
RAB40B-202ENST00000538809 NDUFC1O43677 76 aa6.57□□□□□ -1.36
RAB40B-202ENST00000538809 IMUPQ9GZP8 106 aa6.57□□□□□ -1.36
RAB40B-202ENST00000538809 CRIPTQ9P021 101 aa6.57□□□□□ -1.36
RAB40B-202ENST00000538809 MP68P56378 58 aa6.55□□□□□ -1.36
RAB40B-202ENST00000538809 J3QR89 54 aa6.54□□□□□ -1.36
RAB40B-202ENST00000538809 H3BPC8 53 aa6.5□□□□□ -1.37
RAB40B-202ENST00000538809 ADM2Q7Z4H4 148 aa6.48□□□□□ -1.37
RAB40B-202ENST00000538809 NEBP20929 6669 aa6.48□□□□□ -1.37
RAB40B-202ENST00000538809 MUC12Q9UKN1 5478 aa6.46□□□□□ -1.38
RAB40B-202ENST00000538809 DMAC1Q96GE9 116 aa6.44□□□□□ -1.38
RAB40B-202ENST00000538809 SCGB1A1P11684 91 aa6.41□□□□□ -1.38
RAB40B-202ENST00000538809 MT-ATP8P03928 68 aa6.37□□□□□ -1.39
RAB40B-202ENST00000538809 P0C880 135 aa6.35□□□□□ -1.39
RAB40B-202ENST00000538809 KRTAP5-9P26371 169 aa6.35□□□□□ -1.39
RAB40B-202ENST00000538809 KRTAP3-2Q9BYR7 98 aa6.33□□□□□ -1.4
RAB40B-202ENST00000538809 K7ERU9 68 aa6.31□□□□□ -1.4
RAB40B-202ENST00000538809 TRAV7A0A075B6U4 112 aa6.3□□□□□ -1.4
RAB40B-202ENST00000538809 MT1XP80297 61 aa6.3□□□□□ -1.4
RAB40B-202ENST00000538809 R4GN34 69 aa6.3□□□□□ -1.4
RAB40B-202ENST00000538809 KMT2DO14686 5537 aa6.29□□□□□ -1.4
RAB40B-202ENST00000538809 C20orf197Q8N268 126 aa6.28□□□□□ -1.4
RAB40B-202ENST00000538809 SMIM20Q8N5G0 67 aa6.28□□□□□ -1.4
RAB40B-202ENST00000538809 PLAC4Q8WY50 150 aa6.28□□□□□ -1.4
RAB40B-202ENST00000538809 PRO2289Q9P1D8 64 aa6.28□□□□□ -1.4
RAB40B-202ENST00000538809 M0QZ58 72 aa6.27□□□□□ -1.41
RAB40B-202ENST00000538809 MDN1Q9NU22 5596 aa6.25□□□□□ -1.41
RAB40B-202ENST00000538809 KRTAP20-1Q3LI63 56 aa6.24□□□□□ -1.41
RAB40B-202ENST00000538809 ACYP2P14621 99 aa6.23□□□□□ -1.41
RAB40B-202ENST00000538809 LINC01554Q52M75 96 aa6.2□□□□□ -1.42
RAB40B-202ENST00000538809 SPRR2FQ96RM1 72 aa6.19□□□□□ -1.42
RAB40B-202ENST00000538809 SNURFQ9Y675 71 aa6.16□□□□□ -1.42
RAB40B-202ENST00000538809 KRTAP12-2P59991 146 aa6.13□□□□□ -1.43
RAB40B-202ENST00000538809 KRTAP8-1Q8IUC2 63 aa6.13□□□□□ -1.43
RAB40B-202ENST00000538809 SPTSSBQ8NFR3 76 aa6.13□□□□□ -1.43
RAB40B-202ENST00000538809 SPRR2EP22531 72 aa6.12□□□□□ -1.43
RAB40B-202ENST00000538809 SPRR2BP35325 72 aa6.12□□□□□ -1.43
RAB40B-202ENST00000538809 SPRR2AP35326 72 aa6.12□□□□□ -1.43
RAB40B-202ENST00000538809 SPANXA2-OT1Q8N9U9 137 aa6.1□□□□□ -1.43
RAB40B-202ENST00000538809 CHKB-CPT1BH3BT56 60 aa6.08□□□□□ -1.44
RAB40B-202ENST00000538809 SERP2Q8N6R1 65 aa6.08□□□□□ -1.44
RAB40B-202ENST00000538809 KRTAP4-8A0A0G2JLE6 195 aa6.06□□□□□ -1.44
RAB40B-202ENST00000538809 KRTAP4-8Q9BYQ9 185 aa6.06□□□□□ -1.44
RAB40B-202ENST00000538809 KRTAP2-3P0C7H8 128 aa6.03□□□□□ -1.44
RAB40B-202ENST00000538809 KRTAP10-7P60409 375 aaPredicted RBP6.03□□□□□ -1.44
RAB40B-202ENST00000538809 KRTAP2-4Q9BYR9 128 aa6.03□□□□□ -1.44
RAB40B-202ENST00000538809 LCE1AQ5T7P2 110 aa6□□□□□ -1.45
RAB40B-202ENST00000538809 KRTAP10-12P60413 245 aa5.97□□□□□ -1.45
RAB40B-202ENST00000538809 KRTAP13-4Q3LI77 160 aa5.96□□□□□ -1.46
RAB40B-202ENST00000538809 COA5Q86WW8 74 aa5.92□□□□□ -1.46
RAB40B-202ENST00000538809 SPRR2DP22532 72 aa5.91□□□□□ -1.46
RAB40B-202ENST00000538809 COX7CP15954 63 aa5.9□□□□□ -1.46
RAB40B-202ENST00000538809 CYSTM1Q9H1C7 97 aa5.85□□□□□ -1.47
RAB40B-202ENST00000538809 H7BZZ5 65 aa5.83□□□□□ -1.48
RAB40B-202ENST00000538809 KRTAP2-2Q9BYT5 123 aa5.83□□□□□ -1.48
RAB40B-202ENST00000538809 KRTAP2-1Q9BYU5 128 aa5.83□□□□□ -1.48
RAB40B-202ENST00000538809 CAMK2N1Q7Z7J9 78 aa5.79□□□□□ -1.48
RAB40B-202ENST00000538809 SERP1Q9Y6X1 66 aa5.75□□□□□ -1.49
RAB40B-202ENST00000538809 SEC61GP60059 68 aa5.74□□□□□ -1.49
RAB40B-202ENST00000538809 LCE3BQ5TA77 95 aa5.74□□□□□ -1.49
RAB40B-202ENST00000538809 A0A0D9SG42 100 aa5.72□□□□□ -1.49
RAB40B-202ENST00000538809 SPATA8Q6RVD6 105 aa5.72□□□□□ -1.49
RAB40B-202ENST00000538809 A0A1B0GU33 70 aa5.69□□□□□ -1.5
RAB40B-202ENST00000538809 KRTAP12-1P59990 96 aa5.65□□□□□ -1.5
RAB40B-202ENST00000538809 ANAPC13Q9BS18 74 aa5.65□□□□□ -1.5
RAB40B-202ENST00000538809 KRTAP19-7Q3SYF9 63 aa5.63□□□□□ -1.51
RAB40B-202ENST00000538809 SPINT4Q6UDR6 99 aa5.62□□□□□ -1.51
RAB40B-202ENST00000538809 CCDC179H3BU77 68 aa5.59□□□□□ -1.51
RAB40B-202ENST00000538809 A0A1B0GU69 56 aa5.58□□□□□ -1.52
RAB40B-202ENST00000538809 MT1EP04732 61 aa5.58□□□□□ -1.52
RAB40B-202ENST00000538809 LCE5AQ5TCM9 118 aa5.56□□□□□ -1.52
RAB40B-202ENST00000538809 KRTAP19-3Q7Z4W3 81 aa5.54□□□□□ -1.52
RAB40B-202ENST00000538809 DSTQ03001 7570 aaKnown RBP5.53□□□□□ -1.52
RAB40B-202ENST00000538809 SMIM26A0A096LP01 95 aa5.52□□□□□ -1.53
RAB40B-202ENST00000538809 A8MU10 97 aa5.51□□□□□ -1.53
RAB40B-202ENST00000538809 ATP5EP56381 51 aaPredicted RBP5.5□□□□□ -1.53
RAB40B-202ENST00000538809 KRTAP19-5Q3LI72 72 aa5.48□□□□□ -1.53
RAB40B-202ENST00000538809 GPR98Q8WXG9 6306 aa5.43□□□□□ -1.54
RAB40B-202ENST00000538809 LINC01558Q9Y6Z2 57 aa5.42□□□□□ -1.54
RAB40B-202ENST00000538809 C10orf95Q9H7T3 257 aa5.41□□□□□ -1.54
RAB40B-202ENST00000538809 PRR15LQ9BU68 103 aa5.39□□□□□ -1.55
RAB40B-202ENST00000538809 KRTAP4-9Q9BYQ8 210 aa5.38□□□□□ -1.55
RAB40B-202ENST00000538809 MT1GP13640 62 aa5.37□□□□□ -1.55
RAB40B-202ENST00000538809 TMEM258P61165 79 aa5.36□□□□□ -1.55
RAB40B-202ENST00000538809 LCE3AQ5TA76 89 aa5.34□□□□□ -1.55
RAB40B-202ENST00000538809 PP632Q6XCG6 107 aa5.34□□□□□ -1.55
RAB40B-202ENST00000538809 MT1MQ8N339 61 aa5.33□□□□□ -1.56
RAB40B-202ENST00000538809 TNP1P09430 55 aa5.32□□□□□ -1.56
RAB40B-202ENST00000538809 MT1LQ93083 61 aa5.32□□□□□ -1.56
RAB40B-202ENST00000538809 UQCR11O14957 56 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms