RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 A0A1B0GVY2 172 aa9.72□□□□□ -0.85
SFSWAP-207ENST00000538548 KRTAP10-6P60371 365 aaPredicted RBP9.69□□□□□ -0.86
SFSWAP-207ENST00000538548 PKHD1L1Q86WI1 4243 aa9.68□□□□□ -0.86
SFSWAP-207ENST00000538548 TPRXLQ17RH7 258 aa9.66□□□□□ -0.86
SFSWAP-207ENST00000538548 KRTAP13-4Q3LI77 160 aa9.64□□□□□ -0.87
SFSWAP-207ENST00000538548 SPINT4Q6UDR6 99 aa9.64□□□□□ -0.87
SFSWAP-207ENST00000538548 EPPK1P58107 5090 aaKnown RBP9.63□□□□□ -0.87
SFSWAP-207ENST00000538548 LRP1Q07954 4544 aaKnown RBP9.62□□□□□ -0.87
SFSWAP-207ENST00000538548 KIAA1109Q2LD37 5005 aa9.62□□□□□ -0.87
SFSWAP-207ENST00000538548 A0A0D9SG42 100 aa9.61□□□□□ -0.87
SFSWAP-207ENST00000538548 KRTAP3-3Q9BYR6 98 aa9.6□□□□□ -0.87
SFSWAP-207ENST00000538548 HSPG2P98160 4391 aa9.58□□□□□ -0.88
SFSWAP-207ENST00000538548 KRTAP3-2Q9BYR7 98 aa9.57□□□□□ -0.88
SFSWAP-207ENST00000538548 MYCBP2O75592 4640 aa9.52□□□□□ -0.88
SFSWAP-207ENST00000538548 DMBT1Q9UGM3 2413 aaPredicted RBP9.52□□□□□ -0.89
SFSWAP-207ENST00000538548 C10orf95Q9H7T3 257 aa9.51□□□□□ -0.89
SFSWAP-207ENST00000538548 RYR1P21817 5038 aa9.49□□□□□ -0.89
SFSWAP-207ENST00000538548 KRTAP10-4P60372 401 aaPredicted RBP9.48□□□□□ -0.89
SFSWAP-207ENST00000538548 KRTAP15-1Q3LI76 137 aa9.48□□□□□ -0.89
SFSWAP-207ENST00000538548 KRTAP17-1Q9BYP8 105 aa9.47□□□□□ -0.89
SFSWAP-207ENST00000538548 S4R3F8 94 aa9.45□□□□□ -0.9
SFSWAP-207ENST00000538548 NDUFAF8A1L188 74 aa9.4□□□□□ -0.9
SFSWAP-207ENST00000538548 KRTAP12-2P59991 146 aa9.38□□□□□ -0.91
SFSWAP-207ENST00000538548 Q5VSD8 79 aa9.35□□□□□ -0.91
SFSWAP-207ENST00000538548 FAT3Q8TDW7 4589 aa9.33□□□□□ -0.92
SFSWAP-207ENST00000538548 KRTAP10-8P60410 259 aa9.33□□□□□ -0.92
SFSWAP-207ENST00000538548 TNXBP22105 4242 aa9.31□□□□□ -0.92
SFSWAP-207ENST00000538548 KRTAP12-1P59990 96 aa9.29□□□□□ -0.92
SFSWAP-207ENST00000538548 XP32Q5T750 250 aa9.25□□□□□ -0.93
SFSWAP-207ENST00000538548 M0QZ58 72 aa9.15□□□□□ -0.95
SFSWAP-207ENST00000538548 KRTAP4-5Q9BYR2 181 aa9.15□□□□□ -0.95
SFSWAP-207ENST00000538548 ABCA13Q86UQ4 5058 aa9.12□□□□□ -0.95
SFSWAP-207ENST00000538548 HERC2O95714 4834 aa9.01□□□□□ -0.97
SFSWAP-207ENST00000538548 LPAP08519 4548 aa8.98□□□□□ -0.97
SFSWAP-207ENST00000538548 MT1HL1P0DM35 61 aa8.98□□□□□ -0.97
SFSWAP-207ENST00000538548 LRP2P98164 4655 aa8.93□□□□□ -0.98
SFSWAP-207ENST00000538548 J3QL48 77 aa8.91□□□□□ -0.98
SFSWAP-207ENST00000538548 BIRC6Q9NR09 4857 aa8.89□□□□□ -0.99
SFSWAP-207ENST00000538548 PLAC4Q8WY50 150 aa8.84□□□□□ -0.99
SFSWAP-207ENST00000538548 R4GN34 69 aa8.8□□□□□ -1
SFSWAP-207ENST00000538548 PCLOQ9Y6V0 5065 aa8.79□□□□□ -1
SFSWAP-207ENST00000538548 HERC1Q15751 4861 aa8.77□□□□□ -1.01
SFSWAP-207ENST00000538548 LUZP6Q538Z0 58 aa8.64□□□□□ -1.03
SFSWAP-207ENST00000538548 MUC2Q02817 5179 aa8.63□□□□□ -1.03
SFSWAP-207ENST00000538548 PP632Q6XCG6 107 aa8.59□□□□□ -1.03
SFSWAP-207ENST00000538548 A0A0A0MQY5 61 aa8.59□□□□□ -1.03
SFSWAP-207ENST00000538548 LORP23490 312 aaPredicted RBP8.56□□□□□ -1.04
SFSWAP-207ENST00000538548 CAMK2N1Q7Z7J9 78 aa8.41□□□□□ -1.06
SFSWAP-207ENST00000538548 HMCN2Q8NDA2 5059 aa8.38□□□□□ -1.07
SFSWAP-207ENST00000538548 MUC17Q685J3 4493 aa8.36□□□□□ -1.07
SFSWAP-207ENST00000538548 KRTAP4-1Q9BYQ7 146 aa8.33□□□□□ -1.08
SFSWAP-207ENST00000538548 SEC61BP60468 96 aaKnown RBP8.32□□□□□ -1.08
SFSWAP-207ENST00000538548 RNF213Q63HN8 5207 aa8.31□□□□□ -1.08
SFSWAP-207ENST00000538548 UBR4Q5T4S7 5183 aa8.26□□□□□ -1.09
SFSWAP-207ENST00000538548 FAT4Q6V0I7 4981 aa8.22□□□□□ -1.09
SFSWAP-207ENST00000538548 KRTAP23-1A1A580 65 aa8.19□□□□□ -1.1
SFSWAP-207ENST00000538548 SPRR5A0A1B0GTR4 108 aa8.18□□□□□ -1.1
SFSWAP-207ENST00000538548 TNP1P09430 55 aa8.16□□□□□ -1.1
SFSWAP-207ENST00000538548 KRTAP19-2Q3LHN2 52 aa8.15□□□□□ -1.11
SFSWAP-207ENST00000538548 FLGP20930 4061 aaPredicted RBP7.95□□□□□ -1.14
SFSWAP-207ENST00000538548 LCE2DQ5TA82 110 aaPredicted RBP7.8□□□□□ -1.16
SFSWAP-207ENST00000538548 LCE2CQ5TA81 110 aa7.73□□□□□ -1.17
SFSWAP-207ENST00000538548 PRO2289Q9P1D8 64 aa7.72□□□□□ -1.17
SFSWAP-207ENST00000538548 SPRR2GQ9BYE4 73 aa7.67□□□□□ -1.18
SFSWAP-207ENST00000538548 LCE3AQ5TA76 89 aa7.65□□□□□ -1.18
SFSWAP-207ENST00000538548 M0R2T5 61 aa7.64□□□□□ -1.19
SFSWAP-207ENST00000538548 INE1O15225 51 aa7.59□□□□□ -1.19
SFSWAP-207ENST00000538548 KRTAP19-1Q8IUB9 90 aa7.58□□□□□ -1.2
SFSWAP-207ENST00000538548 MT1HP80294 61 aa7.56□□□□□ -1.2
SFSWAP-207ENST00000538548 KRTAP8-1Q8IUC2 63 aa7.49□□□□□ -1.21
SFSWAP-207ENST00000538548 MT1FP04733 61 aa7.34□□□□□ -1.23
SFSWAP-207ENST00000538548 KRTAP10-10P60014 251 aa7.33□□□□□ -1.24
SFSWAP-207ENST00000538548 MT2AP02795 61 aa7.32□□□□□ -1.24
SFSWAP-207ENST00000538548 KRTAP9-8Q9BYQ0 159 aa7.31□□□□□ -1.24
SFSWAP-207ENST00000538548 KRTAP12-3P60328 96 aa7.28□□□□□ -1.24
SFSWAP-207ENST00000538548 KRTAP19-8Q3LI54 63 aa7.24□□□□□ -1.25
SFSWAP-207ENST00000538548 USH2AO75445 5202 aa7.22□□□□□ -1.25
SFSWAP-207ENST00000538548 KRTAP10-5P60370 271 aa7.21□□□□□ -1.26
SFSWAP-207ENST00000538548 KRTAP10-12P60413 245 aa7.21□□□□□ -1.26
SFSWAP-207ENST00000538548 MT1XP80297 61 aa7.18□□□□□ -1.26
SFSWAP-207ENST00000538548 MT1BP07438 61 aa7.12□□□□□ -1.27
SFSWAP-207ENST00000538548 FSIP2Q5CZC0 6907 aa7.07□□□□□ -1.28
SFSWAP-207ENST00000538548 LCE2AQ5TA79 106 aaPredicted RBP7.07□□□□□ -1.28
SFSWAP-207ENST00000538548 LCE2BO14633 110 aa7.02□□□□□ -1.29
SFSWAP-207ENST00000538548 KRTAP10-7P60409 375 aaPredicted RBP7.02□□□□□ -1.29
SFSWAP-207ENST00000538548 KRTAP9-3Q9BYQ3 159 aa7□□□□□ -1.29
SFSWAP-207ENST00000538548 LCE3CQ5T5A8 94 aa6.88□□□□□ -1.31
SFSWAP-207ENST00000538548 KRTAP19-5Q3LI72 72 aa6.8□□□□□ -1.32
SFSWAP-207ENST00000538548 KMT2DO14686 5537 aa6.8□□□□□ -1.32
SFSWAP-207ENST00000538548 SSPOA2VEC9 5147 aa6.69□□□□□ -1.34
SFSWAP-207ENST00000538548 KRTAP9-6A8MVA2 160 aa6.67□□□□□ -1.34
SFSWAP-207ENST00000538548 KRTAP2-3P0C7H8 128 aa6.63□□□□□ -1.35
SFSWAP-207ENST00000538548 KRTAP2-4Q9BYR9 128 aa6.63□□□□□ -1.35
SFSWAP-207ENST00000538548 KRTAP2-1Q9BYU5 128 aa6.63□□□□□ -1.35
SFSWAP-207ENST00000538548 KRTAP4-8A0A0G2JLE6 195 aa6.46□□□□□ -1.38
SFSWAP-207ENST00000538548 KRTAP4-8Q9BYQ9 185 aa6.46□□□□□ -1.38
SFSWAP-207ENST00000538548 KRTAP19-4Q3LI73 84 aa6.41□□□□□ -1.38
SFSWAP-207ENST00000538548 KRTAP19-7Q3SYF9 63 aa6.4□□□□□ -1.38
SFSWAP-207ENST00000538548 KRTAP4-7Q9BYR0 210 aa6.39□□□□□ -1.39
SFSWAP-207ENST00000538548 FCGBPQ9Y6R7 5405 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms