RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 DNAH17Q9UFH2 4485 aa5.15□□□□□ -1.58
GGA3-201ENST00000537686 DNAH5Q8TE73 4624 aa5.14□□□□□ -1.59
GGA3-201ENST00000537686 C10orf95Q9H7T3 257 aa5.12□□□□□ -1.59
GGA3-201ENST00000537686 DNAH2Q9P225 4427 aa5.1□□□□□ -1.59
GGA3-201ENST00000537686 KRTAP10-4P60372 401 aaPredicted RBP5.1□□□□□ -1.59
GGA3-201ENST00000537686 NDUFAF8A1L188 74 aa5.09□□□□□ -1.59
GGA3-201ENST00000537686 KRTAP10-10P60014 251 aa5.08□□□□□ -1.6
GGA3-201ENST00000537686 DYNC1H1Q14204 4646 aaKnown RBP5.05□□□□□ -1.6
GGA3-201ENST00000537686 LRP1BQ9NZR2 4599 aa5.05□□□□□ -1.6
GGA3-201ENST00000537686 FAT1Q14517 4588 aa5.04□□□□□ -1.6
GGA3-201ENST00000537686 PP632Q6XCG6 107 aa5.02□□□□□ -1.61
GGA3-201ENST00000537686 HYDINQ4G0P3 5121 aa5□□□□□ -1.61
GGA3-201ENST00000537686 KRTAP4-5Q9BYR2 181 aa4.99□□□□□ -1.61
GGA3-201ENST00000537686 SACSQ9NZJ4 4579 aa4.98□□□□□ -1.61
GGA3-201ENST00000537686 DNAH6Q9C0G6 4158 aa4.98□□□□□ -1.61
GGA3-201ENST00000537686 MT1HL1P0DM35 61 aa4.97□□□□□ -1.61
GGA3-201ENST00000537686 KRTAP3-1Q9BYR8 98 aa4.94□□□□□ -1.62
GGA3-201ENST00000537686 KIAA1109Q2LD37 5005 aa4.91□□□□□ -1.62
GGA3-201ENST00000537686 FAT2Q9NYQ8 4349 aa4.9□□□□□ -1.62
GGA3-201ENST00000537686 RYR2Q92736 4967 aa4.89□□□□□ -1.63
GGA3-201ENST00000537686 VPS13BQ7Z7G8 4022 aa4.89□□□□□ -1.63
GGA3-201ENST00000537686 KMT2CQ8NEZ4 4911 aaKnown RBP4.89□□□□□ -1.63
GGA3-201ENST00000537686 PRO2289Q9P1D8 64 aa4.88□□□□□ -1.63
GGA3-201ENST00000537686 PKHD1P08F94 4074 aa4.88□□□□□ -1.63
GGA3-201ENST00000537686 PKD1P98161 4303 aa4.87□□□□□ -1.63
GGA3-201ENST00000537686 KRTAP12-2P59991 146 aa4.87□□□□□ -1.63
GGA3-201ENST00000537686 RYR3Q15413 4870 aa4.87□□□□□ -1.63
GGA3-201ENST00000537686 APOBP04114 4563 aaKnown RBP4.84□□□□□ -1.64
GGA3-201ENST00000537686 KRTAP12-1P59990 96 aa4.83□□□□□ -1.64
GGA3-201ENST00000537686 RYR1P21817 5038 aa4.83□□□□□ -1.64
GGA3-201ENST00000537686 KRTAP17-1Q9BYP8 105 aa4.81□□□□□ -1.64
GGA3-201ENST00000537686 KRTAP10-6P60371 365 aaPredicted RBP4.77□□□□□ -1.65
GGA3-201ENST00000537686 LRP1Q07954 4544 aaKnown RBP4.77□□□□□ -1.65
GGA3-201ENST00000537686 KRTAP13-4Q3LI77 160 aa4.76□□□□□ -1.65
GGA3-201ENST00000537686 MYCBP2O75592 4640 aa4.71□□□□□ -1.66
GGA3-201ENST00000537686 PKHD1L1Q86WI1 4243 aa4.69□□□□□ -1.66
GGA3-201ENST00000537686 HSPG2P98160 4391 aa4.67□□□□□ -1.66
GGA3-201ENST00000537686 KRTAP3-3Q9BYR6 98 aa4.64□□□□□ -1.67
GGA3-201ENST00000537686 FAT3Q8TDW7 4589 aa4.63□□□□□ -1.67
GGA3-201ENST00000537686 KRTAP3-2Q9BYR7 98 aa4.62□□□□□ -1.67
GGA3-201ENST00000537686 EPPK1P58107 5090 aaKnown RBP4.62□□□□□ -1.67
GGA3-201ENST00000537686 HERC2O95714 4834 aa4.59□□□□□ -1.67
GGA3-201ENST00000537686 KRTAP15-1Q3LI76 137 aa4.58□□□□□ -1.68
GGA3-201ENST00000537686 BIRC6Q9NR09 4857 aa4.53□□□□□ -1.68
GGA3-201ENST00000537686 KRTAP4-1Q9BYQ7 146 aa4.5□□□□□ -1.69
GGA3-201ENST00000537686 TNXBP22105 4242 aa4.48□□□□□ -1.69
GGA3-201ENST00000537686 LRP2P98164 4655 aa4.47□□□□□ -1.69
GGA3-201ENST00000537686 ABCA13Q86UQ4 5058 aa4.44□□□□□ -1.7
GGA3-201ENST00000537686 LORP23490 312 aaPredicted RBP4.4□□□□□ -1.71
GGA3-201ENST00000537686 KRTAP10-12P60413 245 aa4.38□□□□□ -1.71
GGA3-201ENST00000537686 LPAP08519 4548 aa4.38□□□□□ -1.71
GGA3-201ENST00000537686 KRTAP12-3P60328 96 aa4.27□□□□□ -1.73
GGA3-201ENST00000537686 HERC1Q15751 4861 aa4.24□□□□□ -1.73
GGA3-201ENST00000537686 PCLOQ9Y6V0 5065 aa4.23□□□□□ -1.73
GGA3-201ENST00000537686 LCE3AQ5TA76 89 aa4.23□□□□□ -1.73
GGA3-201ENST00000537686 CRCT1Q9UGL9 99 aa4.23□□□□□ -1.73
GGA3-201ENST00000537686 MT1HP80294 61 aa4.22□□□□□ -1.73
GGA3-201ENST00000537686 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
GGA3-201ENST00000537686 MT2AP02795 61 aa4.12□□□□□ -1.75
GGA3-201ENST00000537686 MUC2Q02817 5179 aa4.11□□□□□ -1.75
GGA3-201ENST00000537686 LCE2CQ5TA81 110 aa4.1□□□□□ -1.75
GGA3-201ENST00000537686 HMCN2Q8NDA2 5059 aa4.08□□□□□ -1.76
GGA3-201ENST00000537686 KRTAP19-2Q3LHN2 52 aa4.08□□□□□ -1.76
GGA3-201ENST00000537686 MT1FP04733 61 aa4.08□□□□□ -1.76
GGA3-201ENST00000537686 INE1O15225 51 aa4.07□□□□□ -1.76
GGA3-201ENST00000537686 RNF213Q63HN8 5207 aa4.07□□□□□ -1.76
GGA3-201ENST00000537686 MUC17Q685J3 4493 aa4.07□□□□□ -1.76
GGA3-201ENST00000537686 SPRR2GQ9BYE4 73 aa4.06□□□□□ -1.76
GGA3-201ENST00000537686 LCE2DQ5TA82 110 aaPredicted RBP4.06□□□□□ -1.76
GGA3-201ENST00000537686 KRTAP8-1Q8IUC2 63 aa4.06□□□□□ -1.76
GGA3-201ENST00000537686 UBR4Q5T4S7 5183 aa4.05□□□□□ -1.76
GGA3-201ENST00000537686 FAT4Q6V0I7 4981 aa3.98□□□□□ -1.77
GGA3-201ENST00000537686 FLGP20930 4061 aaPredicted RBP3.97□□□□□ -1.77
GGA3-201ENST00000537686 KRTAP19-1Q8IUB9 90 aa3.96□□□□□ -1.78
GGA3-201ENST00000537686 KRTAP9-8Q9BYQ0 159 aa3.96□□□□□ -1.78
GGA3-201ENST00000537686 FSIP2Q5CZC0 6907 aa3.9□□□□□ -1.79
GGA3-201ENST00000537686 KRTAP10-5P60370 271 aa3.89□□□□□ -1.79
GGA3-201ENST00000537686 KRTAP19-8Q3LI54 63 aa3.83□□□□□ -1.8
GGA3-201ENST00000537686 KRTAP19-5Q3LI72 72 aa3.83□□□□□ -1.8
GGA3-201ENST00000537686 KRTAP9-3Q9BYQ3 159 aa3.82□□□□□ -1.8
GGA3-201ENST00000537686 SPRR2FQ96RM1 72 aa3.81□□□□□ -1.8
GGA3-201ENST00000537686 MT1BP07438 61 aa3.8□□□□□ -1.8
GGA3-201ENST00000537686 SPRR5A0A1B0GTR4 108 aa3.8□□□□□ -1.8
GGA3-201ENST00000537686 SYNE1Q8NF91 8797 aaKnown RBP3.78□□□□□ -1.8
GGA3-201ENST00000537686 KRTAP10-7P60409 375 aaPredicted RBP3.75□□□□□ -1.81
GGA3-201ENST00000537686 LCE2AQ5TA79 106 aaPredicted RBP3.74□□□□□ -1.81
GGA3-201ENST00000537686 MT1XP80297 61 aa3.73□□□□□ -1.81
GGA3-201ENST00000537686 LCE2BO14633 110 aa3.72□□□□□ -1.81
GGA3-201ENST00000537686 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
GGA3-201ENST00000537686 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
GGA3-201ENST00000537686 KRTAP19-4Q3LI73 84 aa3.61□□□□□ -1.83
GGA3-201ENST00000537686 KRTAP4-8A0A0G2JLE6 195 aa3.61□□□□□ -1.83
GGA3-201ENST00000537686 KRTAP4-8Q9BYQ9 185 aa3.61□□□□□ -1.83
GGA3-201ENST00000537686 USH2AO75445 5202 aa3.51□□□□□ -1.85
GGA3-201ENST00000537686 SPRR2EP22531 72 aa3.51□□□□□ -1.85
GGA3-201ENST00000537686 SPRR2BP35325 72 aa3.51□□□□□ -1.85
GGA3-201ENST00000537686 SPRR2AP35326 72 aa3.51□□□□□ -1.85
GGA3-201ENST00000537686 MT1GP13640 62 aa3.48□□□□□ -1.85
GGA3-201ENST00000537686 LCE3BQ5TA77 95 aa3.45□□□□□ -1.86
GGA3-201ENST00000537686 KRTAP19-6Q3LI70 58 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms