RNA–Protein interactions for RNA: ENST00000536727.5

CADM1-204, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CADM1, Length 3,520 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-204ENST00000536727 PKHD1P08F94 4074 aa6.9□□□□□ -1.31
CADM1-204ENST00000536727 KRTAP3-3Q9BYR6 98 aa6.87□□□□□ -1.31
CADM1-204ENST00000536727 KRTAP12-2P59991 146 aa6.85□□□□□ -1.31
CADM1-204ENST00000536727 KRTAP3-2Q9BYR7 98 aa6.85□□□□□ -1.31
CADM1-204ENST00000536727 KRTAP10-8P60410 259 aa6.84□□□□□ -1.31
CADM1-204ENST00000536727 SACSQ9NZJ4 4579 aa6.81□□□□□ -1.32
CADM1-204ENST00000536727 DYNC1H1Q14204 4646 aaKnown RBP6.81□□□□□ -1.32
CADM1-204ENST00000536727 MYCBP2O75592 4640 aa6.81□□□□□ -1.32
CADM1-204ENST00000536727 KRTAP15-1Q3LI76 137 aa6.77□□□□□ -1.33
CADM1-204ENST00000536727 KRTAP12-1P59990 96 aa6.72□□□□□ -1.33
CADM1-204ENST00000536727 XP32Q5T750 250 aa6.69□□□□□ -1.34
CADM1-204ENST00000536727 LRP1Q07954 4544 aaKnown RBP6.68□□□□□ -1.34
CADM1-204ENST00000536727 KRTAP10-4P60372 401 aaPredicted RBP6.68□□□□□ -1.34
CADM1-204ENST00000536727 HSPG2P98160 4391 aa6.65□□□□□ -1.35
CADM1-204ENST00000536727 APOBP04114 4563 aaKnown RBP6.64□□□□□ -1.35
CADM1-204ENST00000536727 PKHD1L1Q86WI1 4243 aa6.62□□□□□ -1.35
CADM1-204ENST00000536727 M0QZ58 72 aa6.61□□□□□ -1.35
CADM1-204ENST00000536727 FAT3Q8TDW7 4589 aa6.56□□□□□ -1.36
CADM1-204ENST00000536727 R4GN34 69 aa6.55□□□□□ -1.36
CADM1-204ENST00000536727 A0A1B0GVY2 172 aa6.55□□□□□ -1.36
CADM1-204ENST00000536727 Q5VSD8 79 aa6.54□□□□□ -1.36
CADM1-204ENST00000536727 PLAC4Q8WY50 150 aa6.47□□□□□ -1.37
CADM1-204ENST00000536727 LPAP08519 4548 aa6.43□□□□□ -1.38
CADM1-204ENST00000536727 LUZP6Q538Z0 58 aa6.41□□□□□ -1.38
CADM1-204ENST00000536727 LRP2P98164 4655 aa6.41□□□□□ -1.38
CADM1-204ENST00000536727 KMT2CQ8NEZ4 4911 aaKnown RBP6.4□□□□□ -1.38
CADM1-204ENST00000536727 TNXBP22105 4242 aa6.39□□□□□ -1.39
CADM1-204ENST00000536727 A0A0A0MQY5 61 aa6.38□□□□□ -1.39
CADM1-204ENST00000536727 KRTAP21-3Q3LHN1 58 aa6.35□□□□□ -1.39
CADM1-204ENST00000536727 CAMK2N1Q7Z7J9 78 aa6.35□□□□□ -1.39
CADM1-204ENST00000536727 LORP23490 312 aaPredicted RBP6.32□□□□□ -1.4
CADM1-204ENST00000536727 RYR2Q92736 4967 aa6.3□□□□□ -1.4
CADM1-204ENST00000536727 MT1HL1P0DM35 61 aa6.24□□□□□ -1.41
CADM1-204ENST00000536727 KIAA1109Q2LD37 5005 aa6.21□□□□□ -1.41
CADM1-204ENST00000536727 KRTAP17-1Q9BYP8 105 aa6.21□□□□□ -1.41
CADM1-204ENST00000536727 RYR1P21817 5038 aa6.19□□□□□ -1.42
CADM1-204ENST00000536727 RYR3Q15413 4870 aa6.12□□□□□ -1.43
CADM1-204ENST00000536727 PP632Q6XCG6 107 aa6.1□□□□□ -1.43
CADM1-204ENST00000536727 SEC61BP60468 96 aaKnown RBP6.08□□□□□ -1.44
CADM1-204ENST00000536727 ABCA13Q86UQ4 5058 aa6.02□□□□□ -1.45
CADM1-204ENST00000536727 TNP1P09430 55 aa6□□□□□ -1.45
CADM1-204ENST00000536727 KRTAP4-1Q9BYQ7 146 aa5.99□□□□□ -1.45
CADM1-204ENST00000536727 J3QL48 77 aa5.93□□□□□ -1.46
CADM1-204ENST00000536727 KRTAP4-5Q9BYR2 181 aa5.92□□□□□ -1.46
CADM1-204ENST00000536727 MUC2Q02817 5179 aa5.86□□□□□ -1.47
CADM1-204ENST00000536727 EPPK1P58107 5090 aaKnown RBP5.82□□□□□ -1.48
CADM1-204ENST00000536727 MUC17Q685J3 4493 aa5.82□□□□□ -1.48
CADM1-204ENST00000536727 KRTAP19-2Q3LHN2 52 aa5.69□□□□□ -1.5
CADM1-204ENST00000536727 M0R2T5 61 aa5.67□□□□□ -1.5
CADM1-204ENST00000536727 SPRR5A0A1B0GTR4 108 aa5.66□□□□□ -1.5
CADM1-204ENST00000536727 LCE3AQ5TA76 89 aa5.62□□□□□ -1.51
CADM1-204ENST00000536727 KRTAP23-1A1A580 65 aa5.61□□□□□ -1.51
CADM1-204ENST00000536727 FLGP20930 4061 aaPredicted RBP5.59□□□□□ -1.51
CADM1-204ENST00000536727 HERC2O95714 4834 aa5.58□□□□□ -1.52
CADM1-204ENST00000536727 FAT4Q6V0I7 4981 aa5.57□□□□□ -1.52
CADM1-204ENST00000536727 PCLOQ9Y6V0 5065 aa5.55□□□□□ -1.52
CADM1-204ENST00000536727 PRO2289Q9P1D8 64 aa5.51□□□□□ -1.53
CADM1-204ENST00000536727 KRTAP10-10P60014 251 aa5.47□□□□□ -1.53
CADM1-204ENST00000536727 KRTAP19-1Q8IUB9 90 aa5.44□□□□□ -1.54
CADM1-204ENST00000536727 HERC1Q15751 4861 aa5.41□□□□□ -1.54
CADM1-204ENST00000536727 SPRR2GQ9BYE4 73 aa5.41□□□□□ -1.54
CADM1-204ENST00000536727 BIRC6Q9NR09 4857 aa5.39□□□□□ -1.55
CADM1-204ENST00000536727 INE1O15225 51 aa5.36□□□□□ -1.55
CADM1-204ENST00000536727 KRTAP12-3P60328 96 aa5.32□□□□□ -1.56
CADM1-204ENST00000536727 HMCN2Q8NDA2 5059 aa5.31□□□□□ -1.56
CADM1-204ENST00000536727 RNF213Q63HN8 5207 aa5.31□□□□□ -1.56
CADM1-204ENST00000536727 LCE2CQ5TA81 110 aa5.3□□□□□ -1.56
CADM1-204ENST00000536727 KRTAP8-1Q8IUC2 63 aa5.3□□□□□ -1.56
CADM1-204ENST00000536727 MT1FP04733 61 aa5.28□□□□□ -1.56
CADM1-204ENST00000536727 KRTAP10-12P60413 245 aa5.27□□□□□ -1.57
CADM1-204ENST00000536727 MT2AP02795 61 aa5.24□□□□□ -1.57
CADM1-204ENST00000536727 MT1HP80294 61 aa5.22□□□□□ -1.57
CADM1-204ENST00000536727 UBR4Q5T4S7 5183 aa5.2□□□□□ -1.58
CADM1-204ENST00000536727 KRTAP10-5P60370 271 aa5.17□□□□□ -1.58
CADM1-204ENST00000536727 MT1XP80297 61 aa5.16□□□□□ -1.58
CADM1-204ENST00000536727 KRTAP10-7P60409 375 aaPredicted RBP5.15□□□□□ -1.58
CADM1-204ENST00000536727 MT1BP07438 61 aa5.11□□□□□ -1.59
CADM1-204ENST00000536727 KRTAP9-8Q9BYQ0 159 aa5.09□□□□□ -1.59
CADM1-204ENST00000536727 KRTAP19-8Q3LI54 63 aa5.07□□□□□ -1.6
CADM1-204ENST00000536727 KRTAP19-5Q3LI72 72 aa5□□□□□ -1.61
CADM1-204ENST00000536727 KMT2DO14686 5537 aa5□□□□□ -1.61
CADM1-204ENST00000536727 LCE3CQ5T5A8 94 aa4.96□□□□□ -1.62
CADM1-204ENST00000536727 USH2AO75445 5202 aa4.9□□□□□ -1.62
CADM1-204ENST00000536727 KRTAP4-8A0A0G2JLE6 195 aa4.85□□□□□ -1.63
CADM1-204ENST00000536727 KRTAP4-8Q9BYQ9 185 aa4.85□□□□□ -1.63
CADM1-204ENST00000536727 KRTAP9-3Q9BYQ3 159 aa4.84□□□□□ -1.63
CADM1-204ENST00000536727 KRTAP9-6A8MVA2 160 aa4.83□□□□□ -1.64
CADM1-204ENST00000536727 KRTAP4-7Q9BYR0 210 aa4.83□□□□□ -1.64
CADM1-204ENST00000536727 LCE2BO14633 110 aa4.69□□□□□ -1.66
CADM1-204ENST00000536727 KRTAP2-3P0C7H8 128 aa4.62□□□□□ -1.67
CADM1-204ENST00000536727 KRTAP2-4Q9BYR9 128 aa4.62□□□□□ -1.67
CADM1-204ENST00000536727 KRTAP2-1Q9BYU5 128 aa4.62□□□□□ -1.67
CADM1-204ENST00000536727 KRTAP19-7Q3SYF9 63 aa4.58□□□□□ -1.68
CADM1-204ENST00000536727 CRCT1Q9UGL9 99 aa4.57□□□□□ -1.68
CADM1-204ENST00000536727 FSIP2Q5CZC0 6907 aa4.5□□□□□ -1.69
CADM1-204ENST00000536727 MT1LQ93083 61 aa4.49□□□□□ -1.69
CADM1-204ENST00000536727 LOC100996750A0A140TA64 210 aa4.47□□□□□ -1.69
CADM1-204ENST00000536727 MT1EP04732 61 aa4.43□□□□□ -1.7
CADM1-204ENST00000536727 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
CADM1-204ENST00000536727 DSTQ03001 7570 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms