RNA–Protein interactions for RNA: ENST00000535835.5

SPARCL1-208, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-208ENST00000535835 COL12A1Q99715 3063 aa1.05□□□□□ -2.24
SPARCL1-208ENST00000535835 FLNCQ14315 2725 aa1.05□□□□□ -2.24
SPARCL1-208ENST00000535835 DNAH9Q9NYC9 4486 aa1.05□□□□□ -2.24
SPARCL1-208ENST00000535835 ATMQ13315 3056 aa1.04□□□□□ -2.24
SPARCL1-208ENST00000535835 DNAH12Q6ZR08 3092 aa1.04□□□□□ -2.24
SPARCL1-208ENST00000535835 TGP01266 2768 aa1.04□□□□□ -2.24
SPARCL1-208ENST00000535835 SPTAN1Q13813 2472 aaKnown RBP1.04□□□□□ -2.24
SPARCL1-208ENST00000535835 KRTAP10-4P60372 401 aaPredicted RBP1.04□□□□□ -2.24
SPARCL1-208ENST00000535835 CENPEQ02224 2701 aa1.04□□□□□ -2.24
SPARCL1-208ENST00000535835 C5orf42Q9H799 3197 aa1.04□□□□□ -2.24
SPARCL1-208ENST00000535835 XIRP2A4UGR9 3374 aa1.04□□□□□ -2.24
SPARCL1-208ENST00000535835 NSD1Q96L73 2696 aaPredicted RBP1.03□□□□□ -2.24
SPARCL1-208ENST00000535835 DCHS2Q6V1P9 2916 aa1.03□□□□□ -2.24
SPARCL1-208ENST00000535835 KALRNO60229 2985 aa1.03□□□□□ -2.24
SPARCL1-208ENST00000535835 DMXL2Q8TDJ6 3036 aa1.03□□□□□ -2.24
SPARCL1-208ENST00000535835 DNAH17Q9UFH2 4485 aa1.03□□□□□ -2.24
SPARCL1-208ENST00000535835 DMDP11532 3685 aa1.03□□□□□ -2.24
SPARCL1-208ENST00000535835 MTORP42345 2549 aa1.03□□□□□ -2.24
SPARCL1-208ENST00000535835 TEX15Q9BXT5 2789 aa1.03□□□□□ -2.24
SPARCL1-208ENST00000535835 ANK3Q12955 4377 aaKnown RBP1.03□□□□□ -2.24
SPARCL1-208ENST00000535835 ZFYVE26Q68DK2 2539 aa1.03□□□□□ -2.25
SPARCL1-208ENST00000535835 ITPR2Q14571 2701 aa1.02□□□□□ -2.25
SPARCL1-208ENST00000535835 COL7A1Q02388 2944 aa1.02□□□□□ -2.25
SPARCL1-208ENST00000535835 SPEGQ15772 3267 aa1.02□□□□□ -2.25
SPARCL1-208ENST00000535835 TENM1Q9UKZ4 2725 aa1.02□□□□□ -2.25
SPARCL1-208ENST00000535835 CSMD3Q7Z407 3707 aa1.02□□□□□ -2.25
SPARCL1-208ENST00000535835 CDH23Q9H251 3354 aa1.01□□□□□ -2.25
SPARCL1-208ENST00000535835 DMXL1Q9Y485 3027 aa1.01□□□□□ -2.25
SPARCL1-208ENST00000535835 ANKRD11Q6UB99 2663 aaPredicted RBP1.01□□□□□ -2.25
SPARCL1-208ENST00000535835 USP34Q70CQ2 3546 aa1.01□□□□□ -2.25
SPARCL1-208ENST00000535835 FLNBO75369 2602 aaKnown RBP1.01□□□□□ -2.25
SPARCL1-208ENST00000535835 TLN2Q9Y4G6 2542 aa1□□□□□ -2.25
SPARCL1-208ENST00000535835 DOPEY1Q5JWR5 2465 aa1□□□□□ -2.25
SPARCL1-208ENST00000535835 FAT3Q8TDW7 4589 aa1□□□□□ -2.25
SPARCL1-208ENST00000535835 USP9XQ93008 2570 aaPredicted RBP1□□□□□ -2.25
SPARCL1-208ENST00000535835 HIVEP1P15822 2718 aa1□□□□□ -2.25
SPARCL1-208ENST00000535835 SETXQ7Z333 2677 aaKnown RBP1□□□□□ -2.25
SPARCL1-208ENST00000535835 RELNP78509 3460 aa0.99□□□□□ -2.25
SPARCL1-208ENST00000535835 FREM2Q5SZK8 3169 aa0.99□□□□□ -2.25
SPARCL1-208ENST00000535835 MYO9AB2RTY4 2548 aa0.99□□□□□ -2.25
SPARCL1-208ENST00000535835 DCHS1Q96JQ0 3298 aa0.99□□□□□ -2.25
SPARCL1-208ENST00000535835 PDZD2O15018 2839 aa0.99□□□□□ -2.25
SPARCL1-208ENST00000535835 HSPG2P98160 4391 aa0.99□□□□□ -2.25
SPARCL1-208ENST00000535835 MAST4O15021 2626 aa0.99□□□□□ -2.25
SPARCL1-208ENST00000535835 PKD1P98161 4303 aa0.98□□□□□ -2.25
SPARCL1-208ENST00000535835 MYO15AQ9UKN7 3530 aa0.98□□□□□ -2.25
SPARCL1-208ENST00000535835 ASPMQ8IZT6 3477 aa0.98□□□□□ -2.25
SPARCL1-208ENST00000535835 SMG1Q96Q15 3661 aaKnown RBP0.98□□□□□ -2.25
SPARCL1-208ENST00000535835 SPENQ96T58 3664 aaKnown RBP0.98□□□□□ -2.25
SPARCL1-208ENST00000535835 DNAH14Q0VDD8 3507 aa0.98□□□□□ -2.25
SPARCL1-208ENST00000535835 DNAH3Q8TD57 4116 aa0.98□□□□□ -2.25
SPARCL1-208ENST00000535835 CMYA5Q8N3K9 4069 aa0.98□□□□□ -2.25
SPARCL1-208ENST00000535835 STAB2Q8WWQ8 2551 aa0.98□□□□□ -2.25
SPARCL1-208ENST00000535835 LAMA1P25391 3075 aa0.97□□□□□ -2.25
SPARCL1-208ENST00000535835 FRAS1Q86XX4 4008 aa0.97□□□□□ -2.25
SPARCL1-208ENST00000535835 LAMA5O15230 3695 aa0.97□□□□□ -2.25
SPARCL1-208ENST00000535835 FASNP49327 2511 aaKnown RBP0.97□□□□□ -2.25
SPARCL1-208ENST00000535835 PKHD1L1Q86WI1 4243 aa0.97□□□□□ -2.25
SPARCL1-208ENST00000535835 KMT2AQ03164 3969 aa0.97□□□□□ -2.25
SPARCL1-208ENST00000535835 BSNQ9UPA5 3926 aa0.97□□□□□ -2.25
SPARCL1-208ENST00000535835 NBEAL1Q6ZS30 2694 aa0.97□□□□□ -2.25
SPARCL1-208ENST00000535835 PRKDCP78527 4128 aaKnown RBP0.97□□□□□ -2.25
SPARCL1-208ENST00000535835 TEP1Q99973 2627 aaKnown RBP0.97□□□□□ -2.25
SPARCL1-208ENST00000535835 STAB1Q9NY15 2570 aa0.97□□□□□ -2.25
SPARCL1-208ENST00000535835 NBEAL2Q6ZNJ1 2754 aa0.96□□□□□ -2.26
SPARCL1-208ENST00000535835 ACACBO00763 2458 aa0.96□□□□□ -2.26
SPARCL1-208ENST00000535835 GCN1Q92616 2671 aaKnown RBP0.96□□□□□ -2.26
SPARCL1-208ENST00000535835 MYO18BQ8IUG5 2567 aa0.96□□□□□ -2.26
SPARCL1-208ENST00000535835 PLECQ15149 4684 aaKnown RBP0.95□□□□□ -2.26
SPARCL1-208ENST00000535835 MXRA5Q9NR99 2828 aa0.95□□□□□ -2.26
SPARCL1-208ENST00000535835 CEP295Q9C0D2 2601 aa0.95□□□□□ -2.26
SPARCL1-208ENST00000535835 SMR3BP02814 79 aaPredicted RBP0.95□□□□□ -2.26
SPARCL1-208ENST00000535835 LOC400499M0QZD8 3231 aa0.95□□□□□ -2.26
SPARCL1-208ENST00000535835 DNAH6Q9C0G6 4158 aa0.95□□□□□ -2.26
SPARCL1-208ENST00000535835 VPS13BQ7Z7G8 4022 aa0.94□□□□□ -2.26
SPARCL1-208ENST00000535835 PKD1L1Q8TDX9 2849 aa0.94□□□□□ -2.26
SPARCL1-208ENST00000535835 ZANQ9Y493 2812 aa0.94□□□□□ -2.26
SPARCL1-208ENST00000535835 CSMD1Q96PZ7 3565 aa0.93□□□□□ -2.26
SPARCL1-208ENST00000535835 TACC2O95359 2948 aa0.93□□□□□ -2.26
SPARCL1-208ENST00000535835 LPAP08519 4548 aa0.93□□□□□ -2.26
SPARCL1-208ENST00000535835 DYNC1H1Q14204 4646 aaKnown RBP0.93□□□□□ -2.26
SPARCL1-208ENST00000535835 NOTCH1P46531 2555 aa0.93□□□□□ -2.26
SPARCL1-208ENST00000535835 DNHD1Q96M86 4753 aa0.93□□□□□ -2.26
SPARCL1-208ENST00000535835 FLNAP21333 2647 aaKnown RBP0.92□□□□□ -2.26
SPARCL1-208ENST00000535835 DNAH5Q8TE73 4624 aa0.92□□□□□ -2.26
SPARCL1-208ENST00000535835 LRP1Q07954 4544 aaKnown RBP0.92□□□□□ -2.26
SPARCL1-208ENST00000535835 FAT2Q9NYQ8 4349 aa0.92□□□□□ -2.26
SPARCL1-208ENST00000535835 TRRAPQ9Y4A5 3859 aa0.91□□□□□ -2.26
SPARCL1-208ENST00000535835 TNXBP22105 4242 aa0.91□□□□□ -2.26
SPARCL1-208ENST00000535835 SVEP1Q4LDE5 3571 aa0.91□□□□□ -2.26
SPARCL1-208ENST00000535835 DNAH7Q8WXX0 4024 aa0.91□□□□□ -2.26
SPARCL1-208ENST00000535835 MT1AP04731 61 aa0.91□□□□□ -2.26
SPARCL1-208ENST00000535835 KRTAP19-5Q3LI72 72 aa0.91□□□□□ -2.26
SPARCL1-208ENST00000535835 WDFY3Q8IZQ1 3526 aa0.91□□□□□ -2.26
SPARCL1-208ENST00000535835 PRM1P04553 51 aa0.9□□□□□ -2.27
SPARCL1-208ENST00000535835 ANK2Q01484 3957 aa0.9□□□□□ -2.27
SPARCL1-208ENST00000535835 FLGP20930 4061 aaPredicted RBP0.9□□□□□ -2.27
SPARCL1-208ENST00000535835 FBN2P35556 2912 aa0.9□□□□□ -2.27
SPARCL1-208ENST00000535835 LYSTQ99698 3801 aa0.9□□□□□ -2.27
SPARCL1-208ENST00000535835 MUC17Q685J3 4493 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms