RNA–Protein interactions for RNA: ENST00000534638.1

ME3-211, Transcript of malic enzyme 3, humanhuman

TSL 4

Gene ME3, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-211ENST00000534638 KRTAP21-1Q3LI58 79 aa0.55□□□□□ -2.32
ME3-211ENST00000534638 LRP1Q07954 4544 aaKnown RBP0.55□□□□□ -2.32
ME3-211ENST00000534638 ITSN2Q9NZM3 1697 aa0.54□□□□□ -2.32
ME3-211ENST00000534638 DNAH9Q9NYC9 4486 aa0.54□□□□□ -2.32
ME3-211ENST00000534638 STARD9Q9P2P6 4700 aa0.54□□□□□ -2.32
ME3-211ENST00000534638 PKD1P98161 4303 aa0.54□□□□□ -2.32
ME3-211ENST00000534638 PRM1P04553 51 aa0.53□□□□□ -2.32
ME3-211ENST00000534638 WNK2Q9Y3S1 2297 aa0.53□□□□□ -2.33
ME3-211ENST00000534638 ACACAQ13085 2346 aa0.53□□□□□ -2.33
ME3-211ENST00000534638 TIAM1Q13009 1591 aa0.52□□□□□ -2.33
ME3-211ENST00000534638 MROH2BQ7Z745 1585 aa0.52□□□□□ -2.33
ME3-211ENST00000534638 HUWE1Q7Z6Z7 4374 aaKnown RBP0.52□□□□□ -2.33
ME3-211ENST00000534638 PLECQ15149 4684 aaKnown RBP0.52□□□□□ -2.33
ME3-211ENST00000534638 HRNRQ86YZ3 2850 aaPredicted RBP0.51□□□□□ -2.33
ME3-211ENST00000534638 M0R1W7 72 aa0.51□□□□□ -2.33
ME3-211ENST00000534638 DEPDC5O75140 1603 aa0.51□□□□□ -2.33
ME3-211ENST00000534638 ABCC6O95255 1503 aa0.51□□□□□ -2.33
ME3-211ENST00000534638 DEFB130BP0DP73 79 aa0.51□□□□□ -2.33
ME3-211ENST00000534638 DEFB130AP0DP74 79 aa0.51□□□□□ -2.33
ME3-211ENST00000534638 IQGAP1P46940 1657 aa0.51□□□□□ -2.33
ME3-211ENST00000534638 ANK3Q12955 4377 aaKnown RBP0.51□□□□□ -2.33
ME3-211ENST00000534638 SAMD9LQ8IVG5 1584 aa0.5□□□□□ -2.33
ME3-211ENST00000534638 FANCD2Q9BXW9 1451 aa0.5□□□□□ -2.33
ME3-211ENST00000534638 IAPPP10997 89 aa0.5□□□□□ -2.33
ME3-211ENST00000534638 DEFB114Q30KQ6 69 aa0.5□□□□□ -2.33
ME3-211ENST00000534638 LYNX1G3V0Z9 82 aa0.49□□□□□ -2.33
ME3-211ENST00000534638 TNXBP22105 4242 aa0.48□□□□□ -2.33
ME3-211ENST00000534638 FAT1Q14517 4588 aa0.48□□□□□ -2.33
ME3-211ENST00000534638 M0R2T5 61 aa0.48□□□□□ -2.33
ME3-211ENST00000534638 NCBP2-AS2Q69YL0 99 aa0.48□□□□□ -2.33
ME3-211ENST00000534638 PLXNC1O60486 1568 aa0.48□□□□□ -2.33
ME3-211ENST00000534638 ATP7AQ04656 1500 aa0.48□□□□□ -2.33
ME3-211ENST00000534638 DEFB135Q30KP9 77 aa0.47□□□□□ -2.33
ME3-211ENST00000534638 PRXQ9BXM0 1461 aa0.47□□□□□ -2.33
ME3-211ENST00000534638 MINOS1Q5TGZ0 78 aa0.46□□□□□ -2.34
ME3-211ENST00000534638 APOBP04114 4563 aaKnown RBP0.46□□□□□ -2.34
ME3-211ENST00000534638 ALS2Q96Q42 1657 aa0.46□□□□□ -2.34
ME3-211ENST00000534638 PKHD1L1Q86WI1 4243 aa0.45□□□□□ -2.34
ME3-211ENST00000534638 DNAH5Q8TE73 4624 aa0.45□□□□□ -2.34
ME3-211ENST00000534638 NMES1Q9C002 83 aa0.45□□□□□ -2.34
ME3-211ENST00000534638 ABCA5Q8WWZ7 1642 aa0.45□□□□□ -2.34
ME3-211ENST00000534638 CLTCL1P53675 1640 aa0.44□□□□□ -2.34
ME3-211ENST00000534638 DNAH3Q8TD57 4116 aa0.44□□□□□ -2.34
ME3-211ENST00000534638 AGLP35573 1532 aa0.43□□□□□ -2.34
ME3-211ENST00000534638 DNAH6Q9C0G6 4158 aa0.43□□□□□ -2.34
ME3-211ENST00000534638 KRTAP19-6Q3LI70 58 aa0.43□□□□□ -2.34
ME3-211ENST00000534638 LY75O60449 1722 aa0.43□□□□□ -2.34
ME3-211ENST00000534638 ABCA10Q8WWZ4 1543 aa0.43□□□□□ -2.34
ME3-211ENST00000534638 MROH2AA6NES4 1674 aa0.43□□□□□ -2.34
ME3-211ENST00000534638 PHGR1C9JFL3 82 aa0.42□□□□□ -2.34
ME3-211ENST00000534638 DNAH10Q8IVF4 4471 aa0.42□□□□□ -2.34
ME3-211ENST00000534638 ABCC8Q09428 1581 aa0.41□□□□□ -2.34
ME3-211ENST00000534638 IGIPA6NJ69 53 aa0.41□□□□□ -2.34
ME3-211ENST00000534638 LPAP08519 4548 aa0.4□□□□□ -2.35
ME3-211ENST00000534638 H0YGG7 62 aa0.4□□□□□ -2.35
ME3-211ENST00000534638 SERF2P84101 59 aa0.4□□□□□ -2.35
ME3-211ENST00000534638 RPS27P42677 84 aaKnown RBP0.39□□□□□ -2.35
ME3-211ENST00000534638 RPS27LQ71UM5 84 aaKnown RBP0.39□□□□□ -2.35
ME3-211ENST00000534638 C6orf48Q9UBA6 75 aa0.39□□□□□ -2.35
ME3-211ENST00000534638 DNAH11Q96DT5 4516 aa0.39□□□□□ -2.35
ME3-211ENST00000534638 DNAH2Q9P225 4427 aa0.37□□□□□ -2.35
ME3-211ENST00000534638 TOGARAM1Q9Y4F4 1720 aa0.37□□□□□ -2.35
ME3-211ENST00000534638 MUC17Q685J3 4493 aa0.36□□□□□ -2.35
ME3-211ENST00000534638 VPS13BQ7Z7G8 4022 aa0.36□□□□□ -2.35
ME3-211ENST00000534638 WT1-ASQ06250 92 aa0.36□□□□□ -2.35
ME3-211ENST00000534638 DEFB106AQ8N104 65 aa0.36□□□□□ -2.35
ME3-211ENST00000534638 S4R3F8 94 aa0.36□□□□□ -2.35
ME3-211ENST00000534638 TRPM2O94759 1503 aa0.36□□□□□ -2.35
ME3-211ENST00000534638 DNAH17Q9UFH2 4485 aa0.36□□□□□ -2.35
ME3-211ENST00000534638 LMO7Q8WWI1 1683 aa0.36□□□□□ -2.35
ME3-211ENST00000534638 KIF1AQ12756 1690 aa0.35□□□□□ -2.35
ME3-211ENST00000534638 SPRR2EP22531 72 aa0.35□□□□□ -2.35
ME3-211ENST00000534638 SPRR2DP22532 72 aa0.35□□□□□ -2.35
ME3-211ENST00000534638 SPRR2BP35325 72 aa0.35□□□□□ -2.35
ME3-211ENST00000534638 SPRR2AP35326 72 aa0.35□□□□□ -2.35
ME3-211ENST00000534638 VPS13DQ5THJ4 4388 aa0.35□□□□□ -2.35
ME3-211ENST00000534638 MT4P47944 62 aa0.34□□□□□ -2.36
ME3-211ENST00000534638 ANKRD36CQ5JPF3 1778 aa0.33□□□□□ -2.36
ME3-211ENST00000534638 PRLHP81277 87 aa0.33□□□□□ -2.36
ME3-211ENST00000534638 LINC00308Q8TCZ7 52 aa0.33□□□□□ -2.36
ME3-211ENST00000534638 NFAT5O94916 1531 aa0.33□□□□□ -2.36
ME3-211ENST00000534638 FLGP20930 4061 aaPredicted RBP0.33□□□□□ -2.36
ME3-211ENST00000534638 H0YGX0 51 aa0.3□□□□□ -2.36
ME3-211ENST00000534638 TMEM167BQ9NRX6 74 aa0.29□□□□□ -2.36
ME3-211ENST00000534638 CDC42BPAQ5VT25 1732 aa0.29□□□□□ -2.36
ME3-211ENST00000534638 DDX60Q8IY21 1712 aaKnown RBP0.29□□□□□ -2.36
ME3-211ENST00000534638 SYCP2Q9BX26 1530 aa0.28□□□□□ -2.36
ME3-211ENST00000534638 TOP2AP11388 1531 aaKnown RBP0.28□□□□□ -2.37
ME3-211ENST00000534638 PLNP26678 52 aa0.27□□□□□ -2.37
ME3-211ENST00000534638 DEFB124Q8NES8 71 aa0.27□□□□□ -2.37
ME3-211ENST00000534638 DNAH8Q96JB1 4490 aa0.27□□□□□ -2.37
ME3-211ENST00000534638 H3BNG1 76 aa0.25□□□□□ -2.37
ME3-211ENST00000534638 FAM208AQ9UK61 1670 aaKnown RBP0.24□□□□□ -2.37
ME3-211ENST00000534638 H3BUA1 57 aa0.24□□□□□ -2.37
ME3-211ENST00000534638 TIMM8BQ9Y5J9 83 aaPredicted RBP0.24□□□□□ -2.37
ME3-211ENST00000534638 SNRPGP15A8MWD9 76 aa0.23□□□□□ -2.37
ME3-211ENST00000534638 SMR3BP02814 79 aaPredicted RBP0.23□□□□□ -2.37
ME3-211ENST00000534638 CMC2Q9NRP2 79 aa0.23□□□□□ -2.37
ME3-211ENST00000534638 KAAG1Q9UBP8 84 aa0.23□□□□□ -2.37
ME3-211ENST00000534638 TFF3Q07654 80 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms