RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 CSAG1Q6PB30 78 aa2.25□□□□□ -2.05
USH1C-210ENST00000534556 LINC00643Q86TS7 51 aa2.25□□□□□ -2.05
USH1C-210ENST00000534556 OCR1Q9BZK8 76 aa2.25□□□□□ -2.05
USH1C-210ENST00000534556 LOC101927531A0A1B0GV80 90 aa2.24□□□□□ -2.05
USH1C-210ENST00000534556 UQCRQO14949 82 aa2.24□□□□□ -2.05
USH1C-210ENST00000534556 ATP5EP2Q5VTU8 51 aa2.24□□□□□ -2.05
USH1C-210ENST00000534556 GPR98Q8WXG9 6306 aa2.24□□□□□ -2.05
USH1C-210ENST00000534556 KMT2DO14686 5537 aa2.23□□□□□ -2.05
USH1C-210ENST00000534556 FAM236AA0A1B0GUQ0 79 aa2.23□□□□□ -2.05
USH1C-210ENST00000534556 FAM236BA0A1B0GV22 79 aa2.23□□□□□ -2.05
USH1C-210ENST00000534556 KRTAP6-3Q3LI67 103 aa2.23□□□□□ -2.05
USH1C-210ENST00000534556 LINC00208Q96KT6 92 aa2.22□□□□□ -2.05
USH1C-210ENST00000534556 KRTAP10-5P60370 271 aa2.21□□□□□ -2.06
USH1C-210ENST00000534556 Q5VV11 94 aa2.21□□□□□ -2.06
USH1C-210ENST00000534556 ATOX1O00244 68 aa2.19□□□□□ -2.06
USH1C-210ENST00000534556 KRTAP3-2Q9BYR7 98 aa2.19□□□□□ -2.06
USH1C-210ENST00000534556 A6NN06 94 aa2.18□□□□□ -2.06
USH1C-210ENST00000534556 H0YAA0 97 aa2.18□□□□□ -2.06
USH1C-210ENST00000534556 MT-ATP8P03928 68 aa2.18□□□□□ -2.06
USH1C-210ENST00000534556 P0C880 135 aa2.18□□□□□ -2.06
USH1C-210ENST00000534556 ADM2Q7Z4H4 148 aa2.17□□□□□ -2.06
USH1C-210ENST00000534556 NDUFC1O43677 76 aa2.16□□□□□ -2.06
USH1C-210ENST00000534556 MT1XP80297 61 aa2.16□□□□□ -2.06
USH1C-210ENST00000534556 IMUPQ9GZP8 106 aa2.16□□□□□ -2.06
USH1C-210ENST00000534556 A8MUN3 132 aa2.15□□□□□ -2.07
USH1C-210ENST00000534556 DMAC1Q96GE9 116 aa2.15□□□□□ -2.07
USH1C-210ENST00000534556 CRIPTQ9P021 101 aa2.15□□□□□ -2.07
USH1C-210ENST00000534556 MP68P56378 58 aa2.14□□□□□ -2.07
USH1C-210ENST00000534556 H3BPC8 53 aa2.13□□□□□ -2.07
USH1C-210ENST00000534556 J3QR89 54 aa2.13□□□□□ -2.07
USH1C-210ENST00000534556 KRTAP5-9P26371 169 aa2.13□□□□□ -2.07
USH1C-210ENST00000534556 TRAV7A0A075B6U4 112 aa2.11□□□□□ -2.07
USH1C-210ENST00000534556 SCGB1A1P11684 91 aa2.11□□□□□ -2.07
USH1C-210ENST00000534556 K7ERU9 68 aa2.09□□□□□ -2.07
USH1C-210ENST00000534556 SNURFQ9Y675 71 aa2.09□□□□□ -2.07
USH1C-210ENST00000534556 KRTAP4-8A0A0G2JLE6 195 aa2.08□□□□□ -2.08
USH1C-210ENST00000534556 M0QZ58 72 aa2.08□□□□□ -2.08
USH1C-210ENST00000534556 KRTAP4-8Q9BYQ9 185 aa2.08□□□□□ -2.08
USH1C-210ENST00000534556 KRTAP2-3P0C7H8 128 aa2.07□□□□□ -2.08
USH1C-210ENST00000534556 KRTAP2-4Q9BYR9 128 aa2.07□□□□□ -2.08
USH1C-210ENST00000534556 R4GN34 69 aa2.07□□□□□ -2.08
USH1C-210ENST00000534556 ACYP2P14621 99 aa2.06□□□□□ -2.08
USH1C-210ENST00000534556 KRTAP10-7P60409 375 aaPredicted RBP2.06□□□□□ -2.08
USH1C-210ENST00000534556 KRTAP13-4Q3LI77 160 aa2.06□□□□□ -2.08
USH1C-210ENST00000534556 KRTAP12-2P59991 146 aa2.05□□□□□ -2.08
USH1C-210ENST00000534556 LINC01554Q52M75 96 aa2.05□□□□□ -2.08
USH1C-210ENST00000534556 C20orf197Q8N268 126 aa2.05□□□□□ -2.08
USH1C-210ENST00000534556 CYSTM1Q9H1C7 97 aa2.05□□□□□ -2.08
USH1C-210ENST00000534556 SMIM20Q8N5G0 67 aa2.04□□□□□ -2.08
USH1C-210ENST00000534556 PLAC4Q8WY50 150 aa2.04□□□□□ -2.08
USH1C-210ENST00000534556 SPRR2FQ96RM1 72 aa2.04□□□□□ -2.08
USH1C-210ENST00000534556 KRTAP10-12P60413 245 aa2.03□□□□□ -2.08
USH1C-210ENST00000534556 SERP2Q8N6R1 65 aa2.03□□□□□ -2.08
USH1C-210ENST00000534556 LCE1AQ5T7P2 110 aa2.02□□□□□ -2.09
USH1C-210ENST00000534556 SPANXA2-OT1Q8N9U9 137 aa2.02□□□□□ -2.09
USH1C-210ENST00000534556 PRO2289Q9P1D8 64 aa2.02□□□□□ -2.09
USH1C-210ENST00000534556 KRTAP8-1Q8IUC2 63 aa2.01□□□□□ -2.09
USH1C-210ENST00000534556 SPRR2EP22531 72 aa2□□□□□ -2.09
USH1C-210ENST00000534556 SPRR2BP35325 72 aa2□□□□□ -2.09
USH1C-210ENST00000534556 SPRR2AP35326 72 aa2□□□□□ -2.09
USH1C-210ENST00000534556 CHKB-CPT1BH3BT56 60 aa1.99□□□□□ -2.09
USH1C-210ENST00000534556 COA5Q86WW8 74 aa1.99□□□□□ -2.09
USH1C-210ENST00000534556 H7BZZ5 65 aa1.98□□□□□ -2.09
USH1C-210ENST00000534556 COX7CP15954 63 aa1.98□□□□□ -2.09
USH1C-210ENST00000534556 KRTAP2-2Q9BYT5 123 aa1.98□□□□□ -2.09
USH1C-210ENST00000534556 KRTAP2-1Q9BYU5 128 aa1.98□□□□□ -2.09
USH1C-210ENST00000534556 AHNAK2Q8IVF2 5795 aa1.98□□□□□ -2.09
USH1C-210ENST00000534556 SPTSSBQ8NFR3 76 aa1.97□□□□□ -2.09
USH1C-210ENST00000534556 SPATA8Q6RVD6 105 aa1.95□□□□□ -2.1
USH1C-210ENST00000534556 KRTAP19-7Q3SYF9 63 aa1.94□□□□□ -2.1
USH1C-210ENST00000534556 DSTQ03001 7570 aaKnown RBP1.93□□□□□ -2.1
USH1C-210ENST00000534556 SPRR2DP22532 72 aa1.93□□□□□ -2.1
USH1C-210ENST00000534556 KRTAP12-1P59990 96 aa1.93□□□□□ -2.1
USH1C-210ENST00000534556 HMCN1Q96RW7 5635 aa1.93□□□□□ -2.1
USH1C-210ENST00000534556 A0A0D9SG42 100 aa1.92□□□□□ -2.1
USH1C-210ENST00000534556 CCDC179H3BU77 68 aa1.92□□□□□ -2.1
USH1C-210ENST00000534556 A8MU10 97 aa1.9□□□□□ -2.11
USH1C-210ENST00000534556 MT1EP04732 61 aa1.9□□□□□ -2.11
USH1C-210ENST00000534556 A0A1B0GU33 70 aa1.89□□□□□ -2.11
USH1C-210ENST00000534556 LCE3BQ5TA77 95 aa1.89□□□□□ -2.11
USH1C-210ENST00000534556 CAMK2N1Q7Z7J9 78 aa1.89□□□□□ -2.11
USH1C-210ENST00000534556 ANAPC13Q9BS18 74 aa1.89□□□□□ -2.11
USH1C-210ENST00000534556 LCE5AQ5TCM9 118 aa1.88□□□□□ -2.11
USH1C-210ENST00000534556 KRTAP19-5Q3LI72 72 aa1.87□□□□□ -2.11
USH1C-210ENST00000534556 SPINT4Q6UDR6 99 aa1.87□□□□□ -2.11
USH1C-210ENST00000534556 SERP1Q9Y6X1 66 aa1.87□□□□□ -2.11
USH1C-210ENST00000534556 C10orf95Q9H7T3 257 aa1.86□□□□□ -2.11
USH1C-210ENST00000534556 SEC61GP60059 68 aa1.85□□□□□ -2.11
USH1C-210ENST00000534556 KRTAP19-3Q7Z4W3 81 aa1.85□□□□□ -2.11
USH1C-210ENST00000534556 KRTAP4-9Q9BYQ8 210 aa1.85□□□□□ -2.11
USH1C-210ENST00000534556 A0A1B0GU69 56 aa1.84□□□□□ -2.11
USH1C-210ENST00000534556 LCE3AQ5TA76 89 aa1.83□□□□□ -2.12
USH1C-210ENST00000534556 MT1LQ93083 61 aa1.82□□□□□ -2.12
USH1C-210ENST00000534556 KRTAP4-3Q9BYR4 195 aa1.82□□□□□ -2.12
USH1C-210ENST00000534556 MT1MQ8N339 61 aa1.81□□□□□ -2.12
USH1C-210ENST00000534556 LINC01558Q9Y6Z2 57 aa1.81□□□□□ -2.12
USH1C-210ENST00000534556 SMIM26A0A096LP01 95 aa1.8□□□□□ -2.12
USH1C-210ENST00000534556 MT1GP13640 62 aa1.8□□□□□ -2.12
USH1C-210ENST00000534556 ATP5EP56381 51 aaPredicted RBP1.78□□□□□ -2.12
USH1C-210ENST00000534556 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms