RNA–Protein interactions for RNA: ENST00000534548.6

NCAPD3-214, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NCAPD3, Length 5,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-214ENST00000534548 TPRXLQ17RH7 258 aa5.33□□□□□ -1.56
NCAPD3-214ENST00000534548 KRTAP10-8P60410 259 aa5.28□□□□□ -1.56
NCAPD3-214ENST00000534548 PP632Q6XCG6 107 aa5.28□□□□□ -1.56
NCAPD3-214ENST00000534548 DNAH5Q8TE73 4624 aa5.28□□□□□ -1.56
NCAPD3-214ENST00000534548 ALMS1Q8TCU4 4167 aa5.25□□□□□ -1.57
NCAPD3-214ENST00000534548 TNP1P09430 55 aa5.24□□□□□ -1.57
NCAPD3-214ENST00000534548 KRTAP12-2P59991 146 aa5.24□□□□□ -1.57
NCAPD3-214ENST00000534548 HYDINQ4G0P3 5121 aa5.23□□□□□ -1.57
NCAPD3-214ENST00000534548 VPS13BQ7Z7G8 4022 aa5.22□□□□□ -1.57
NCAPD3-214ENST00000534548 KRTAP3-1Q9BYR8 98 aa5.2□□□□□ -1.58
NCAPD3-214ENST00000534548 XP32Q5T750 250 aa5.18□□□□□ -1.58
NCAPD3-214ENST00000534548 FAT1Q14517 4588 aa5.18□□□□□ -1.58
NCAPD3-214ENST00000534548 KRTAP15-1Q3LI76 137 aa5.15□□□□□ -1.58
NCAPD3-214ENST00000534548 PKHD1P08F94 4074 aa5.15□□□□□ -1.59
NCAPD3-214ENST00000534548 KRTAP12-1P59990 96 aa5.14□□□□□ -1.59
NCAPD3-214ENST00000534548 KRTAP13-4Q3LI77 160 aa5.13□□□□□ -1.59
NCAPD3-214ENST00000534548 FAT2Q9NYQ8 4349 aa5.12□□□□□ -1.59
NCAPD3-214ENST00000534548 PKD1P98161 4303 aa5.1□□□□□ -1.59
NCAPD3-214ENST00000534548 KRTAP10-6P60371 365 aaPredicted RBP5.08□□□□□ -1.6
NCAPD3-214ENST00000534548 DYNC1H1Q14204 4646 aaKnown RBP5.08□□□□□ -1.6
NCAPD3-214ENST00000534548 MYCBP2O75592 4640 aa5□□□□□ -1.61
NCAPD3-214ENST00000534548 A0A1B0GVY2 172 aa4.99□□□□□ -1.61
NCAPD3-214ENST00000534548 SACSQ9NZJ4 4579 aa4.99□□□□□ -1.61
NCAPD3-214ENST00000534548 KRTAP10-4P60372 401 aaPredicted RBP4.99□□□□□ -1.61
NCAPD3-214ENST00000534548 PRO2289Q9P1D8 64 aa4.98□□□□□ -1.61
NCAPD3-214ENST00000534548 LRP1Q07954 4544 aaKnown RBP4.96□□□□□ -1.61
NCAPD3-214ENST00000534548 APOBP04114 4563 aaKnown RBP4.93□□□□□ -1.62
NCAPD3-214ENST00000534548 KRTAP3-2Q9BYR7 98 aa4.92□□□□□ -1.62
NCAPD3-214ENST00000534548 KRTAP3-3Q9BYR6 98 aa4.88□□□□□ -1.63
NCAPD3-214ENST00000534548 KMT2CQ8NEZ4 4911 aaKnown RBP4.86□□□□□ -1.63
NCAPD3-214ENST00000534548 KRTAP10-10P60014 251 aa4.86□□□□□ -1.63
NCAPD3-214ENST00000534548 FAT3Q8TDW7 4589 aa4.82□□□□□ -1.64
NCAPD3-214ENST00000534548 HSPG2P98160 4391 aa4.82□□□□□ -1.64
NCAPD3-214ENST00000534548 KIAA1109Q2LD37 5005 aa4.8□□□□□ -1.64
NCAPD3-214ENST00000534548 RYR2Q92736 4967 aa4.79□□□□□ -1.64
NCAPD3-214ENST00000534548 PKHD1L1Q86WI1 4243 aa4.79□□□□□ -1.64
NCAPD3-214ENST00000534548 KRTAP17-1Q9BYP8 105 aa4.74□□□□□ -1.65
NCAPD3-214ENST00000534548 RYR3Q15413 4870 aa4.72□□□□□ -1.65
NCAPD3-214ENST00000534548 LRP2P98164 4655 aa4.72□□□□□ -1.65
NCAPD3-214ENST00000534548 RYR1P21817 5038 aa4.71□□□□□ -1.66
NCAPD3-214ENST00000534548 MT1HL1P0DM35 61 aa4.71□□□□□ -1.66
NCAPD3-214ENST00000534548 INE1O15225 51 aa4.7□□□□□ -1.66
NCAPD3-214ENST00000534548 TNXBP22105 4242 aa4.67□□□□□ -1.66
NCAPD3-214ENST00000534548 LPAP08519 4548 aa4.65□□□□□ -1.66
NCAPD3-214ENST00000534548 KRTAP4-5Q9BYR2 181 aa4.59□□□□□ -1.68
NCAPD3-214ENST00000534548 ABCA13Q86UQ4 5058 aa4.53□□□□□ -1.68
NCAPD3-214ENST00000534548 EPPK1P58107 5090 aaKnown RBP4.52□□□□□ -1.69
NCAPD3-214ENST00000534548 LORP23490 312 aaPredicted RBP4.51□□□□□ -1.69
NCAPD3-214ENST00000534548 KRTAP23-1A1A580 65 aa4.48□□□□□ -1.69
NCAPD3-214ENST00000534548 KRTAP4-1Q9BYQ7 146 aa4.45□□□□□ -1.7
NCAPD3-214ENST00000534548 MUC2Q02817 5179 aa4.39□□□□□ -1.71
NCAPD3-214ENST00000534548 LCE3AQ5TA76 89 aa4.37□□□□□ -1.71
NCAPD3-214ENST00000534548 HERC2O95714 4834 aa4.35□□□□□ -1.71
NCAPD3-214ENST00000534548 KRTAP12-3P60328 96 aa4.31□□□□□ -1.72
NCAPD3-214ENST00000534548 KRTAP10-12P60413 245 aa4.31□□□□□ -1.72
NCAPD3-214ENST00000534548 MUC17Q685J3 4493 aa4.26□□□□□ -1.73
NCAPD3-214ENST00000534548 KRTAP19-2Q3LHN2 52 aa4.2□□□□□ -1.74
NCAPD3-214ENST00000534548 FAT4Q6V0I7 4981 aa4.19□□□□□ -1.74
NCAPD3-214ENST00000534548 HERC1Q15751 4861 aa4.18□□□□□ -1.74
NCAPD3-214ENST00000534548 RNF213Q63HN8 5207 aa4.11□□□□□ -1.75
NCAPD3-214ENST00000534548 FLGP20930 4061 aaPredicted RBP4.09□□□□□ -1.75
NCAPD3-214ENST00000534548 PCLOQ9Y6V0 5065 aa4.09□□□□□ -1.75
NCAPD3-214ENST00000534548 BIRC6Q9NR09 4857 aa4.06□□□□□ -1.76
NCAPD3-214ENST00000534548 SPRR5A0A1B0GTR4 108 aa4.02□□□□□ -1.77
NCAPD3-214ENST00000534548 CRCT1Q9UGL9 99 aa4.02□□□□□ -1.77
NCAPD3-214ENST00000534548 UBR4Q5T4S7 5183 aa3.99□□□□□ -1.77
NCAPD3-214ENST00000534548 LCE2CQ5TA81 110 aa3.99□□□□□ -1.77
NCAPD3-214ENST00000534548 HMCN2Q8NDA2 5059 aa3.99□□□□□ -1.77
NCAPD3-214ENST00000534548 KRTAP19-1Q8IUB9 90 aa3.98□□□□□ -1.77
NCAPD3-214ENST00000534548 SPRR2GQ9BYE4 73 aa3.97□□□□□ -1.77
NCAPD3-214ENST00000534548 KRTAP8-1Q8IUC2 63 aa3.96□□□□□ -1.78
NCAPD3-214ENST00000534548 MT1HP80294 61 aa3.94□□□□□ -1.78
NCAPD3-214ENST00000534548 MT1FP04733 61 aa3.94□□□□□ -1.78
NCAPD3-214ENST00000534548 KRTAP10-5P60370 271 aa3.94□□□□□ -1.78
NCAPD3-214ENST00000534548 MT2AP02795 61 aa3.92□□□□□ -1.78
NCAPD3-214ENST00000534548 LCE3CQ5T5A8 94 aa3.87□□□□□ -1.79
NCAPD3-214ENST00000534548 KRTAP19-5Q3LI72 72 aa3.83□□□□□ -1.8
NCAPD3-214ENST00000534548 KRTAP9-8Q9BYQ0 159 aa3.82□□□□□ -1.8
NCAPD3-214ENST00000534548 MT1BP07438 61 aa3.76□□□□□ -1.81
NCAPD3-214ENST00000534548 MT1XP80297 61 aa3.76□□□□□ -1.81
NCAPD3-214ENST00000534548 KRTAP19-8Q3LI54 63 aa3.74□□□□□ -1.81
NCAPD3-214ENST00000534548 KRTAP10-7P60409 375 aaPredicted RBP3.73□□□□□ -1.81
NCAPD3-214ENST00000534548 KRTAP19-4Q3LI73 84 aa3.71□□□□□ -1.82
NCAPD3-214ENST00000534548 USH2AO75445 5202 aa3.7□□□□□ -1.82
NCAPD3-214ENST00000534548 KRTAP9-3Q9BYQ3 159 aa3.65□□□□□ -1.83
NCAPD3-214ENST00000534548 KMT2DO14686 5537 aa3.65□□□□□ -1.83
NCAPD3-214ENST00000534548 SPRR2FQ96RM1 72 aa3.64□□□□□ -1.83
NCAPD3-214ENST00000534548 KRTAP12-4P60329 112 aa3.6□□□□□ -1.83
NCAPD3-214ENST00000534548 KRTAP4-8A0A0G2JLE6 195 aa3.56□□□□□ -1.84
NCAPD3-214ENST00000534548 KRTAP4-8Q9BYQ9 185 aa3.56□□□□□ -1.84
NCAPD3-214ENST00000534548 LCE2BO14633 110 aa3.55□□□□□ -1.84
NCAPD3-214ENST00000534548 FSIP2Q5CZC0 6907 aa3.54□□□□□ -1.84
NCAPD3-214ENST00000534548 SPRR2EP22531 72 aa3.49□□□□□ -1.85
NCAPD3-214ENST00000534548 SPRR2BP35325 72 aa3.49□□□□□ -1.85
NCAPD3-214ENST00000534548 SPRR2AP35326 72 aa3.49□□□□□ -1.85
NCAPD3-214ENST00000534548 KRTAP4-7Q9BYR0 210 aa3.45□□□□□ -1.86
NCAPD3-214ENST00000534548 LCE3BQ5TA77 95 aa3.44□□□□□ -1.86
NCAPD3-214ENST00000534548 MT1GP13640 62 aa3.43□□□□□ -1.86
NCAPD3-214ENST00000534548 SPRR2DP22532 72 aa3.42□□□□□ -1.86
NCAPD3-214ENST00000534548 KRTAP9-6A8MVA2 160 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms