RNA–Protein interactions for RNA: ENST00000534011.5

FOXRED1-217, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 2

Gene FOXRED1, Length 1,955 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-217ENST00000534011 KRTAP3-3Q9BYR6 98 aa7.17□□□□□ -1.26
FOXRED1-217ENST00000534011 ROMO1P60602 79 aa7.15□□□□□ -1.27
FOXRED1-217ENST00000534011 RPL37P61927 97 aaKnown RBP7.15□□□□□ -1.27
FOXRED1-217ENST00000534011 TNXBP22105 4242 aa7.11□□□□□ -1.27
FOXRED1-217ENST00000534011 KRTAP3-2Q9BYR7 98 aa7.11□□□□□ -1.27
FOXRED1-217ENST00000534011 CRIPTQ9P021 101 aa7.11□□□□□ -1.27
FOXRED1-217ENST00000534011 KRTAP10-8P60410 259 aa7.1□□□□□ -1.27
FOXRED1-217ENST00000534011 KMT2CQ8NEZ4 4911 aaKnown RBP7.09□□□□□ -1.27
FOXRED1-217ENST00000534011 KRTAP13-4Q3LI77 160 aa7.09□□□□□ -1.27
FOXRED1-217ENST00000534011 S4R3F8 94 aa7.08□□□□□ -1.28
FOXRED1-217ENST00000534011 LRP1Q07954 4544 aaKnown RBP7.07□□□□□ -1.28
FOXRED1-217ENST00000534011 RYR2Q92736 4967 aa7.06□□□□□ -1.28
FOXRED1-217ENST00000534011 DMBT1Q9UGM3 2413 aaPredicted RBP7.05□□□□□ -1.28
FOXRED1-217ENST00000534011 SEC61BP60468 96 aaKnown RBP7.04□□□□□ -1.28
FOXRED1-217ENST00000534011 HSPG2P98160 4391 aa7.04□□□□□ -1.28
FOXRED1-217ENST00000534011 XP32Q5T750 250 aa7.04□□□□□ -1.28
FOXRED1-217ENST00000534011 A0A0D9SG42 100 aa7.02□□□□□ -1.29
FOXRED1-217ENST00000534011 RYR3Q15413 4870 aa6.98□□□□□ -1.29
FOXRED1-217ENST00000534011 P0C880 135 aa6.96□□□□□ -1.3
FOXRED1-217ENST00000534011 TPRXLQ17RH7 258 aa6.95□□□□□ -1.3
FOXRED1-217ENST00000534011 Q5VSD8 79 aa6.92□□□□□ -1.3
FOXRED1-217ENST00000534011 MYCBP2O75592 4640 aa6.89□□□□□ -1.31
FOXRED1-217ENST00000534011 KRTAP12-2P59991 146 aa6.88□□□□□ -1.31
FOXRED1-217ENST00000534011 C10orf95Q9H7T3 257 aa6.86□□□□□ -1.31
FOXRED1-217ENST00000534011 M0QZ58 72 aa6.84□□□□□ -1.31
FOXRED1-217ENST00000534011 KRTAP12-1P59990 96 aa6.84□□□□□ -1.31
FOXRED1-217ENST00000534011 SPINT4Q6UDR6 99 aa6.84□□□□□ -1.32
FOXRED1-217ENST00000534011 MT1HL1P0DM35 61 aa6.8□□□□□ -1.32
FOXRED1-217ENST00000534011 RYR1P21817 5038 aa6.76□□□□□ -1.33
FOXRED1-217ENST00000534011 EPPK1P58107 5090 aaKnown RBP6.75□□□□□ -1.33
FOXRED1-217ENST00000534011 KRTAP15-1Q3LI76 137 aa6.72□□□□□ -1.33
FOXRED1-217ENST00000534011 LCE2DQ5TA82 110 aaPredicted RBP6.72□□□□□ -1.33
FOXRED1-217ENST00000534011 KRTAP17-1Q9BYP8 105 aa6.69□□□□□ -1.34
FOXRED1-217ENST00000534011 LPAP08519 4548 aa6.67□□□□□ -1.34
FOXRED1-217ENST00000534011 LRP2P98164 4655 aa6.66□□□□□ -1.34
FOXRED1-217ENST00000534011 KIAA1109Q2LD37 5005 aa6.64□□□□□ -1.35
FOXRED1-217ENST00000534011 NDUFAF8A1L188 74 aa6.58□□□□□ -1.36
FOXRED1-217ENST00000534011 R4GN34 69 aa6.57□□□□□ -1.36
FOXRED1-217ENST00000534011 BIRC6Q9NR09 4857 aa6.49□□□□□ -1.37
FOXRED1-217ENST00000534011 KRTAP4-5Q9BYR2 181 aa6.48□□□□□ -1.37
FOXRED1-217ENST00000534011 MUC17Q685J3 4493 aa6.45□□□□□ -1.38
FOXRED1-217ENST00000534011 LUZP6Q538Z0 58 aa6.42□□□□□ -1.38
FOXRED1-217ENST00000534011 LORP23490 312 aaPredicted RBP6.41□□□□□ -1.38
FOXRED1-217ENST00000534011 HERC2O95714 4834 aa6.38□□□□□ -1.39
FOXRED1-217ENST00000534011 ABCA13Q86UQ4 5058 aa6.37□□□□□ -1.39
FOXRED1-217ENST00000534011 PLAC4Q8WY50 150 aa6.35□□□□□ -1.39
FOXRED1-217ENST00000534011 PP632Q6XCG6 107 aa6.35□□□□□ -1.39
FOXRED1-217ENST00000534011 KRTAP4-1Q9BYQ7 146 aa6.32□□□□□ -1.4
FOXRED1-217ENST00000534011 KRTAP19-2Q3LHN2 52 aa6.31□□□□□ -1.4
FOXRED1-217ENST00000534011 CAMK2N1Q7Z7J9 78 aa6.24□□□□□ -1.41
FOXRED1-217ENST00000534011 PCLOQ9Y6V0 5065 aa6.21□□□□□ -1.41
FOXRED1-217ENST00000534011 KRTAP23-1A1A580 65 aa6.14□□□□□ -1.43
FOXRED1-217ENST00000534011 FLGP20930 4061 aaPredicted RBP6.14□□□□□ -1.43
FOXRED1-217ENST00000534011 HERC1Q15751 4861 aa6.09□□□□□ -1.44
FOXRED1-217ENST00000534011 TNP1P09430 55 aa6.07□□□□□ -1.44
FOXRED1-217ENST00000534011 SPRR5A0A1B0GTR4 108 aa5.97□□□□□ -1.45
FOXRED1-217ENST00000534011 SPRR2GQ9BYE4 73 aa5.91□□□□□ -1.46
FOXRED1-217ENST00000534011 MUC2Q02817 5179 aa5.9□□□□□ -1.46
FOXRED1-217ENST00000534011 HMCN2Q8NDA2 5059 aa5.87□□□□□ -1.47
FOXRED1-217ENST00000534011 LCE2CQ5TA81 110 aa5.84□□□□□ -1.48
FOXRED1-217ENST00000534011 KRTAP19-1Q8IUB9 90 aa5.81□□□□□ -1.48
FOXRED1-217ENST00000534011 LCE3AQ5TA76 89 aa5.69□□□□□ -1.5
FOXRED1-217ENST00000534011 UBR4Q5T4S7 5183 aa5.68□□□□□ -1.5
FOXRED1-217ENST00000534011 FAT4Q6V0I7 4981 aa5.66□□□□□ -1.5
FOXRED1-217ENST00000534011 M0R2T5 61 aa5.66□□□□□ -1.5
FOXRED1-217ENST00000534011 MT1HP80294 61 aa5.66□□□□□ -1.5
FOXRED1-217ENST00000534011 KRTAP19-8Q3LI54 63 aa5.62□□□□□ -1.51
FOXRED1-217ENST00000534011 MT2AP02795 61 aa5.62□□□□□ -1.51
FOXRED1-217ENST00000534011 KRTAP8-1Q8IUC2 63 aa5.62□□□□□ -1.51
FOXRED1-217ENST00000534011 MT1FP04733 61 aa5.61□□□□□ -1.51
FOXRED1-217ENST00000534011 KRTAP10-10P60014 251 aa5.6□□□□□ -1.51
FOXRED1-217ENST00000534011 RNF213Q63HN8 5207 aa5.59□□□□□ -1.51
FOXRED1-217ENST00000534011 KRTAP9-8Q9BYQ0 159 aa5.57□□□□□ -1.52
FOXRED1-217ENST00000534011 LCE2BO14633 110 aa5.56□□□□□ -1.52
FOXRED1-217ENST00000534011 PRO2289Q9P1D8 64 aa5.54□□□□□ -1.52
FOXRED1-217ENST00000534011 KRTAP10-5P60370 271 aa5.49□□□□□ -1.53
FOXRED1-217ENST00000534011 MT1BP07438 61 aa5.49□□□□□ -1.53
FOXRED1-217ENST00000534011 MT1XP80297 61 aa5.49□□□□□ -1.53
FOXRED1-217ENST00000534011 KRTAP12-3P60328 96 aa5.44□□□□□ -1.54
FOXRED1-217ENST00000534011 KRTAP10-12P60413 245 aa5.44□□□□□ -1.54
FOXRED1-217ENST00000534011 INE1O15225 51 aa5.39□□□□□ -1.55
FOXRED1-217ENST00000534011 KRTAP9-3Q9BYQ3 159 aa5.34□□□□□ -1.55
FOXRED1-217ENST00000534011 KRTAP10-7P60409 375 aaPredicted RBP5.31□□□□□ -1.56
FOXRED1-217ENST00000534011 LCE2AQ5TA79 106 aaPredicted RBP5.21□□□□□ -1.58
FOXRED1-217ENST00000534011 LCE3CQ5T5A8 94 aa5.14□□□□□ -1.59
FOXRED1-217ENST00000534011 KRTAP19-5Q3LI72 72 aa5.13□□□□□ -1.59
FOXRED1-217ENST00000534011 KRTAP19-4Q3LI73 84 aa4.98□□□□□ -1.61
FOXRED1-217ENST00000534011 KRTAP9-6A8MVA2 160 aa4.93□□□□□ -1.62
FOXRED1-217ENST00000534011 KRTAP4-8A0A0G2JLE6 195 aa4.91□□□□□ -1.62
FOXRED1-217ENST00000534011 KRTAP4-8Q9BYQ9 185 aa4.91□□□□□ -1.62
FOXRED1-217ENST00000534011 KRTAP19-7Q3SYF9 63 aa4.89□□□□□ -1.63
FOXRED1-217ENST00000534011 KRTAP2-3P0C7H8 128 aa4.88□□□□□ -1.63
FOXRED1-217ENST00000534011 KRTAP2-4Q9BYR9 128 aa4.88□□□□□ -1.63
FOXRED1-217ENST00000534011 KRTAP2-1Q9BYU5 128 aa4.88□□□□□ -1.63
FOXRED1-217ENST00000534011 KMT2DO14686 5537 aa4.87□□□□□ -1.63
FOXRED1-217ENST00000534011 USH2AO75445 5202 aa4.85□□□□□ -1.63
FOXRED1-217ENST00000534011 KRTAP4-7Q9BYR0 210 aa4.78□□□□□ -1.64
FOXRED1-217ENST00000534011 MT1LQ93083 61 aa4.76□□□□□ -1.65
FOXRED1-217ENST00000534011 MT1EP04732 61 aa4.74□□□□□ -1.65
FOXRED1-217ENST00000534011 KRTAP9-2Q9BYQ4 174 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms