RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 SPRR2EP22531 72 aa7.65□□□□□ -1.18
UBXN1-216ENST00000533908 SPRR2BP35325 72 aa7.65□□□□□ -1.18
UBXN1-216ENST00000533908 SPRR2AP35326 72 aa7.65□□□□□ -1.18
UBXN1-216ENST00000533908 PRO0461Q9UI25 63 aa7.65□□□□□ -1.18
UBXN1-216ENST00000533908 MT1XP80297 61 aa7.6□□□□□ -1.19
UBXN1-216ENST00000533908 H0YAA0 97 aa7.57□□□□□ -1.2
UBXN1-216ENST00000533908 K7EP34 96 aa7.56□□□□□ -1.2
UBXN1-216ENST00000533908 LCE1AQ5T7P2 110 aa7.55□□□□□ -1.2
UBXN1-216ENST00000533908 NDUFC1O43677 76 aa7.52□□□□□ -1.21
UBXN1-216ENST00000533908 KRTAP8-1Q8IUC2 63 aa7.52□□□□□ -1.21
UBXN1-216ENST00000533908 TRAV22A0A0B4J277 110 aa7.51□□□□□ -1.21
UBXN1-216ENST00000533908 LOC101927531A0A1B0GV80 90 aa7.51□□□□□ -1.21
UBXN1-216ENST00000533908 ADM2Q7Z4H4 148 aa7.51□□□□□ -1.21
UBXN1-216ENST00000533908 PRO2289Q9P1D8 64 aa7.51□□□□□ -1.21
UBXN1-216ENST00000533908 KRTAP2-2Q9BYT5 123 aa7.5□□□□□ -1.21
UBXN1-216ENST00000533908 KRTAP2-1Q9BYU5 128 aa7.5□□□□□ -1.21
UBXN1-216ENST00000533908 A8MUN3 132 aa7.49□□□□□ -1.21
UBXN1-216ENST00000533908 KRTAP4-8A0A0G2JLE6 195 aa7.44□□□□□ -1.22
UBXN1-216ENST00000533908 LOC105371267A0A1B0GV96 52 aa7.44□□□□□ -1.22
UBXN1-216ENST00000533908 KRTAP12-2P59991 146 aa7.44□□□□□ -1.22
UBXN1-216ENST00000533908 KRTAP4-8Q9BYQ9 185 aa7.44□□□□□ -1.22
UBXN1-216ENST00000533908 PLAC4Q8WY50 150 aa7.43□□□□□ -1.22
UBXN1-216ENST00000533908 COL5A1-AS1Q5SY13 56 aa7.41□□□□□ -1.22
UBXN1-216ENST00000533908 SPRR2DP22532 72 aa7.39□□□□□ -1.23
UBXN1-216ENST00000533908 ETDBQ3ZM63 59 aa7.38□□□□□ -1.23
UBXN1-216ENST00000533908 ACYP1P07311 99 aa7.37□□□□□ -1.23
UBXN1-216ENST00000533908 H0Y9P7 68 aa7.36□□□□□ -1.23
UBXN1-216ENST00000533908 UQCRQO14949 82 aa7.35□□□□□ -1.23
UBXN1-216ENST00000533908 P0C880 135 aa7.33□□□□□ -1.24
UBXN1-216ENST00000533908 F8W1H4 67 aa7.32□□□□□ -1.24
UBXN1-216ENST00000533908 ATOX1O00244 68 aa7.3□□□□□ -1.24
UBXN1-216ENST00000533908 R4GN34 69 aa7.29□□□□□ -1.24
UBXN1-216ENST00000533908 GTF2H5Q6ZYL4 71 aa7.28□□□□□ -1.24
UBXN1-216ENST00000533908 KRTAP10-7P60409 375 aaPredicted RBP7.26□□□□□ -1.25
UBXN1-216ENST00000533908 M0QZ58 72 aa7.25□□□□□ -1.25
UBXN1-216ENST00000533908 HIST1H4AP62805 103 aaKnown RBP7.25□□□□□ -1.25
UBXN1-216ENST00000533908 LINC00208Q96KT6 92 aa7.24□□□□□ -1.25
UBXN1-216ENST00000533908 LCE3BQ5TA77 95 aa7.23□□□□□ -1.25
UBXN1-216ENST00000533908 KRTAP3-2Q9BYR7 98 aa7.23□□□□□ -1.25
UBXN1-216ENST00000533908 KRTAP10-12P60413 245 aa7.2□□□□□ -1.26
UBXN1-216ENST00000533908 LINC01554Q52M75 96 aa7.18□□□□□ -1.26
UBXN1-216ENST00000533908 ATP5EP2Q5VTU8 51 aa7.18□□□□□ -1.26
UBXN1-216ENST00000533908 C20orf197Q8N268 126 aa7.16□□□□□ -1.26
UBXN1-216ENST00000533908 FAM240AA0A1B0GVK7 77 aa7.12□□□□□ -1.27
UBXN1-216ENST00000533908 OCR1Q9BZK8 76 aa7.11□□□□□ -1.27
UBXN1-216ENST00000533908 MP68P56378 58 aa7.07□□□□□ -1.28
UBXN1-216ENST00000533908 DMAC1Q96GE9 116 aa7.05□□□□□ -1.28
UBXN1-216ENST00000533908 LINC00643Q86TS7 51 aa7.02□□□□□ -1.29
UBXN1-216ENST00000533908 PCP4L1A6NKN8 68 aa6.97□□□□□ -1.29
UBXN1-216ENST00000533908 GPR98Q8WXG9 6306 aa6.95□□□□□ -1.3
UBXN1-216ENST00000533908 DSTQ03001 7570 aaKnown RBP6.92□□□□□ -1.3
UBXN1-216ENST00000533908 H3BPC8 53 aa6.92□□□□□ -1.3
UBXN1-216ENST00000533908 MT-ATP8P03928 68 aa6.9□□□□□ -1.3
UBXN1-216ENST00000533908 KRTAP4-9Q9BYQ8 210 aa6.88□□□□□ -1.31
UBXN1-216ENST00000533908 TRAV7A0A075B6U4 112 aa6.86□□□□□ -1.31
UBXN1-216ENST00000533908 LCE5AQ5TCM9 118 aa6.84□□□□□ -1.31
UBXN1-216ENST00000533908 KRTAP19-7Q3SYF9 63 aa6.81□□□□□ -1.32
UBXN1-216ENST00000533908 ACYP2P14621 99 aa6.78□□□□□ -1.32
UBXN1-216ENST00000533908 MT1EP04732 61 aa6.75□□□□□ -1.33
UBXN1-216ENST00000533908 KRTAP19-3Q7Z4W3 81 aa6.75□□□□□ -1.33
UBXN1-216ENST00000533908 SCGB1A1P11684 91 aa6.73□□□□□ -1.33
UBXN1-216ENST00000533908 KRTAP13-4Q3LI77 160 aa6.72□□□□□ -1.33
UBXN1-216ENST00000533908 SPTSSBQ8NFR3 76 aa6.71□□□□□ -1.34
UBXN1-216ENST00000533908 LCE1DQ5T752 114 aa6.65□□□□□ -1.34
UBXN1-216ENST00000533908 CAMK2N1Q7Z7J9 78 aa6.65□□□□□ -1.34
UBXN1-216ENST00000533908 CHKB-CPT1BH3BT56 60 aa6.61□□□□□ -1.35
UBXN1-216ENST00000533908 CYSTM1Q9H1C7 97 aa6.59□□□□□ -1.35
UBXN1-216ENST00000533908 A0A1B0GV90 55 aa6.58□□□□□ -1.36
UBXN1-216ENST00000533908 MT1GP13640 62 aa6.55□□□□□ -1.36
UBXN1-216ENST00000533908 KRTAP19-5Q3LI72 72 aa6.53□□□□□ -1.36
UBXN1-216ENST00000533908 MT4P47944 62 aa6.52□□□□□ -1.37
UBXN1-216ENST00000533908 A0A0D9SG42 100 aa6.5□□□□□ -1.37
UBXN1-216ENST00000533908 LCE4AQ5TA78 99 aa6.5□□□□□ -1.37
UBXN1-216ENST00000533908 J3QR89 54 aa6.49□□□□□ -1.37
UBXN1-216ENST00000533908 HMCN1Q96RW7 5635 aa6.46□□□□□ -1.37
UBXN1-216ENST00000533908 SNURFQ9Y675 71 aa6.46□□□□□ -1.38
UBXN1-216ENST00000533908 MT1MQ8N339 61 aa6.45□□□□□ -1.38
UBXN1-216ENST00000533908 PP632Q6XCG6 107 aa6.42□□□□□ -1.38
UBXN1-216ENST00000533908 SMIM20Q8N5G0 67 aa6.42□□□□□ -1.38
UBXN1-216ENST00000533908 MT1LQ93083 61 aa6.39□□□□□ -1.39
UBXN1-216ENST00000533908 SPANXA2-OT1Q8N9U9 137 aa6.38□□□□□ -1.39
UBXN1-216ENST00000533908 KRTAP4-3Q9BYR4 195 aa6.38□□□□□ -1.39
UBXN1-216ENST00000533908 KRTAP5-4Q6L8H1 288 aa6.37□□□□□ -1.39
UBXN1-216ENST00000533908 SPATA8Q6RVD6 105 aa6.36□□□□□ -1.39
UBXN1-216ENST00000533908 KRTAP5-10Q6L8G5 202 aa6.35□□□□□ -1.39
UBXN1-216ENST00000533908 AHNAK2Q8IVF2 5795 aa6.34□□□□□ -1.39
UBXN1-216ENST00000533908 KRTAP4-6Q9BYQ5 205 aa6.34□□□□□ -1.39
UBXN1-216ENST00000533908 SPINT4Q6UDR6 99 aa6.33□□□□□ -1.4
UBXN1-216ENST00000533908 KRTAP12-1P59990 96 aa6.3□□□□□ -1.4
UBXN1-216ENST00000533908 COA5Q86WW8 74 aa6.25□□□□□ -1.41
UBXN1-216ENST00000533908 SERP1Q9Y6X1 66 aa6.22□□□□□ -1.41
UBXN1-216ENST00000533908 A0A1B0GU33 70 aa6.21□□□□□ -1.42
UBXN1-216ENST00000533908 C10orf95Q9H7T3 257 aa6.21□□□□□ -1.42
UBXN1-216ENST00000533908 SEC61GP60059 68 aa6.2□□□□□ -1.42
UBXN1-216ENST00000533908 LCE3AQ5TA76 89 aa6.2□□□□□ -1.42
UBXN1-216ENST00000533908 KRTAP5-7Q6L8G8 165 aa6.14□□□□□ -1.43
UBXN1-216ENST00000533908 SERP2Q8N6R1 65 aa6.14□□□□□ -1.43
UBXN1-216ENST00000533908 KRTAP5-3Q6L8H2 238 aa6.13□□□□□ -1.43
UBXN1-216ENST00000533908 KRTAP4-7Q9BYR0 210 aa6.13□□□□□ -1.43
UBXN1-216ENST00000533908 K7ERU9 68 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms