RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 ALMS1Q8TCU4 4167 aa3.85□□□□□ -1.79
CSRP1-218ENST00000533402 PRKDCP78527 4128 aaKnown RBP3.83□□□□□ -1.8
CSRP1-218ENST00000533402 KRTAP3-1Q9BYR8 98 aa3.75□□□□□ -1.81
CSRP1-218ENST00000533402 HUWE1Q7Z6Z7 4374 aaKnown RBP3.74□□□□□ -1.81
CSRP1-218ENST00000533402 KRTAP10-6P60371 365 aaPredicted RBP3.74□□□□□ -1.81
CSRP1-218ENST00000533402 DYNC2H1Q8NCM8 4307 aaKnown RBP3.63□□□□□ -1.83
CSRP1-218ENST00000533402 CRCT1Q9UGL9 99 aa3.62□□□□□ -1.83
CSRP1-218ENST00000533402 DNAH2Q9P225 4427 aa3.61□□□□□ -1.83
CSRP1-218ENST00000533402 PKHD1P08F94 4074 aa3.61□□□□□ -1.83
CSRP1-218ENST00000533402 DNAH10Q8IVF4 4471 aa3.61□□□□□ -1.83
CSRP1-218ENST00000533402 KRTAP23-1A1A580 65 aa3.61□□□□□ -1.83
CSRP1-218ENST00000533402 DNAH1Q9P2D7 4330 aa3.58□□□□□ -1.84
CSRP1-218ENST00000533402 KRTAP3-2Q9BYR7 98 aa3.56□□□□□ -1.84
CSRP1-218ENST00000533402 KRTAP10-4P60372 401 aaPredicted RBP3.55□□□□□ -1.84
CSRP1-218ENST00000533402 MT1HL1P0DM35 61 aa3.53□□□□□ -1.84
CSRP1-218ENST00000533402 DNAH9Q9NYC9 4486 aa3.52□□□□□ -1.85
CSRP1-218ENST00000533402 KRTAP3-3Q9BYR6 98 aa3.49□□□□□ -1.85
CSRP1-218ENST00000533402 KRTAP10-12P60413 245 aa3.48□□□□□ -1.85
CSRP1-218ENST00000533402 VPS13DQ5THJ4 4388 aa3.43□□□□□ -1.86
CSRP1-218ENST00000533402 STARD9Q9P2P6 4700 aa3.43□□□□□ -1.86
CSRP1-218ENST00000533402 FLGP20930 4061 aaPredicted RBP3.42□□□□□ -1.86
CSRP1-218ENST00000533402 PKD1P98161 4303 aa3.41□□□□□ -1.86
CSRP1-218ENST00000533402 KRTAP12-3P60328 96 aa3.4□□□□□ -1.86
CSRP1-218ENST00000533402 FAT2Q9NYQ8 4349 aa3.39□□□□□ -1.87
CSRP1-218ENST00000533402 KRTAP8-1Q8IUC2 63 aa3.37□□□□□ -1.87
CSRP1-218ENST00000533402 PKHD1L1Q86WI1 4243 aa3.36□□□□□ -1.87
CSRP1-218ENST00000533402 LCE3AQ5TA76 89 aa3.35□□□□□ -1.87
CSRP1-218ENST00000533402 DNAH11Q96DT5 4516 aa3.31□□□□□ -1.88
CSRP1-218ENST00000533402 PLECQ15149 4684 aaKnown RBP3.29□□□□□ -1.88
CSRP1-218ENST00000533402 KRTAP10-5P60370 271 aa3.29□□□□□ -1.88
CSRP1-218ENST00000533402 TNXBP22105 4242 aa3.26□□□□□ -1.89
CSRP1-218ENST00000533402 LORP23490 312 aaPredicted RBP3.24□□□□□ -1.89
CSRP1-218ENST00000533402 DNAH17Q9UFH2 4485 aa3.23□□□□□ -1.89
CSRP1-218ENST00000533402 KRTAP19-4Q3LI73 84 aa3.23□□□□□ -1.89
CSRP1-218ENST00000533402 KRTAP10-7P60409 375 aaPredicted RBP3.2□□□□□ -1.9
CSRP1-218ENST00000533402 KRTAP4-5Q9BYR2 181 aa3.2□□□□□ -1.9
CSRP1-218ENST00000533402 DNAH8Q96JB1 4490 aa3.19□□□□□ -1.9
CSRP1-218ENST00000533402 DNAH5Q8TE73 4624 aa3.13□□□□□ -1.91
CSRP1-218ENST00000533402 DYNC1H1Q14204 4646 aaKnown RBP3.11□□□□□ -1.91
CSRP1-218ENST00000533402 SPRR2GQ9BYE4 73 aa3.1□□□□□ -1.91
CSRP1-218ENST00000533402 SPRR2FQ96RM1 72 aa3.09□□□□□ -1.91
CSRP1-218ENST00000533402 LRP1BQ9NZR2 4599 aa3.04□□□□□ -1.92
CSRP1-218ENST00000533402 MT1HP80294 61 aa3.03□□□□□ -1.92
CSRP1-218ENST00000533402 HSPG2P98160 4391 aa3□□□□□ -1.93
CSRP1-218ENST00000533402 DNHD1Q96M86 4753 aa2.99□□□□□ -1.93
CSRP1-218ENST00000533402 SACSQ9NZJ4 4579 aa2.99□□□□□ -1.93
CSRP1-218ENST00000533402 APOBP04114 4563 aaKnown RBP2.98□□□□□ -1.93
CSRP1-218ENST00000533402 SPRR2EP22531 72 aa2.98□□□□□ -1.93
CSRP1-218ENST00000533402 SPRR2BP35325 72 aa2.98□□□□□ -1.93
CSRP1-218ENST00000533402 SPRR2AP35326 72 aa2.98□□□□□ -1.93
CSRP1-218ENST00000533402 LCE3CQ5T5A8 94 aa2.98□□□□□ -1.93
CSRP1-218ENST00000533402 MT2AP02795 61 aa2.96□□□□□ -1.94
CSRP1-218ENST00000533402 MYCBP2O75592 4640 aa2.96□□□□□ -1.94
CSRP1-218ENST00000533402 KRTAP12-4P60329 112 aa2.96□□□□□ -1.94
CSRP1-218ENST00000533402 SPRR2DP22532 72 aa2.94□□□□□ -1.94
CSRP1-218ENST00000533402 KRTAP4-1Q9BYQ7 146 aa2.93□□□□□ -1.94
CSRP1-218ENST00000533402 KRTAP19-8Q3LI54 63 aa2.92□□□□□ -1.94
CSRP1-218ENST00000533402 SPRR5A0A1B0GTR4 108 aa2.92□□□□□ -1.94
CSRP1-218ENST00000533402 LCE2BO14633 110 aa2.89□□□□□ -1.95
CSRP1-218ENST00000533402 KRTAP19-5Q3LI72 72 aa2.89□□□□□ -1.95
CSRP1-218ENST00000533402 RYR1P21817 5038 aa2.87□□□□□ -1.95
CSRP1-218ENST00000533402 FAT1Q14517 4588 aa2.86□□□□□ -1.95
CSRP1-218ENST00000533402 MT1FP04733 61 aa2.84□□□□□ -1.95
CSRP1-218ENST00000533402 RYR2Q92736 4967 aa2.84□□□□□ -1.95
CSRP1-218ENST00000533402 LRP1Q07954 4544 aaKnown RBP2.84□□□□□ -1.95
CSRP1-218ENST00000533402 FAT3Q8TDW7 4589 aa2.83□□□□□ -1.96
CSRP1-218ENST00000533402 RYR3Q15413 4870 aa2.81□□□□□ -1.96
CSRP1-218ENST00000533402 KRTAP19-1Q8IUB9 90 aa2.76□□□□□ -1.97
CSRP1-218ENST00000533402 LCE3BQ5TA77 95 aa2.75□□□□□ -1.97
CSRP1-218ENST00000533402 LCE2CQ5TA81 110 aa2.75□□□□□ -1.97
CSRP1-218ENST00000533402 KRTAP9-8Q9BYQ0 159 aa2.73□□□□□ -1.97
CSRP1-218ENST00000533402 LPAP08519 4548 aa2.72□□□□□ -1.97
CSRP1-218ENST00000533402 HYDINQ4G0P3 5121 aa2.71□□□□□ -1.98
CSRP1-218ENST00000533402 MT1GP13640 62 aa2.7□□□□□ -1.98
CSRP1-218ENST00000533402 LCE2DQ5TA82 110 aaPredicted RBP2.68□□□□□ -1.98
CSRP1-218ENST00000533402 KRTAP9-3Q9BYQ3 159 aa2.68□□□□□ -1.98
CSRP1-218ENST00000533402 KRTAP17-1Q9BYP8 105 aa2.68□□□□□ -1.98
CSRP1-218ENST00000533402 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
CSRP1-218ENST00000533402 MT3P25713 68 aa2.67□□□□□ -1.98
CSRP1-218ENST00000533402 BIRC6Q9NR09 4857 aa2.66□□□□□ -1.98
CSRP1-218ENST00000533402 MT1XP80297 61 aa2.66□□□□□ -1.98
CSRP1-218ENST00000533402 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.98
CSRP1-218ENST00000533402 PCLOQ9Y6V0 5065 aa2.64□□□□□ -1.99
CSRP1-218ENST00000533402 MT1BP07438 61 aa2.64□□□□□ -1.99
CSRP1-218ENST00000533402 KIAA1109Q2LD37 5005 aa2.64□□□□□ -1.99
CSRP1-218ENST00000533402 LRP2P98164 4655 aa2.64□□□□□ -1.99
CSRP1-218ENST00000533402 KRTAP19-2Q3LHN2 52 aa2.64□□□□□ -1.99
CSRP1-218ENST00000533402 HERC2O95714 4834 aa2.61□□□□□ -1.99
CSRP1-218ENST00000533402 KRTAP19-6Q3LI70 58 aa2.59□□□□□ -1.99
CSRP1-218ENST00000533402 PRM1P04553 51 aa2.58□□□□□ -2
CSRP1-218ENST00000533402 MUC17Q685J3 4493 aa2.57□□□□□ -2
CSRP1-218ENST00000533402 KRTAP9-6A0A140TA67 174 aa2.57□□□□□ -2
CSRP1-218ENST00000533402 KRTAP20-1Q3LI63 56 aa2.56□□□□□ -2
CSRP1-218ENST00000533402 HERC1Q15751 4861 aa2.55□□□□□ -2
CSRP1-218ENST00000533402 KRTAP9-2Q9BYQ4 174 aa2.55□□□□□ -2
CSRP1-218ENST00000533402 LCE2AQ5TA79 106 aaPredicted RBP2.54□□□□□ -2
CSRP1-218ENST00000533402 KRTAP19-3Q7Z4W3 81 aa2.53□□□□□ -2.01
CSRP1-218ENST00000533402 MT4P47944 62 aa2.51□□□□□ -2.01
CSRP1-218ENST00000533402 MT1LQ93083 61 aa2.5□□□□□ -2.01
CSRP1-218ENST00000533402 KMT2CQ8NEZ4 4911 aaKnown RBP2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms