RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 FAT1Q14517 4588 aa5.85□□□□□ -1.47
BDNF-218ENST00000533246 DNAH1Q9P2D7 4330 aa5.82□□□□□ -1.48
BDNF-218ENST00000533246 STARD9Q9P2P6 4700 aa5.78□□□□□ -1.48
BDNF-218ENST00000533246 KRTAP3-3Q9BYR6 98 aa5.78□□□□□ -1.48
BDNF-218ENST00000533246 PRKDCP78527 4128 aaKnown RBP5.75□□□□□ -1.49
BDNF-218ENST00000533246 KRTAP3-2Q9BYR7 98 aa5.74□□□□□ -1.49
BDNF-218ENST00000533246 LYSTQ99698 3801 aa5.72□□□□□ -1.49
BDNF-218ENST00000533246 DNAH8Q96JB1 4490 aa5.72□□□□□ -1.49
BDNF-218ENST00000533246 MYCBP2O75592 4640 aa5.71□□□□□ -1.5
BDNF-218ENST00000533246 LRP1BQ9NZR2 4599 aa5.71□□□□□ -1.5
BDNF-218ENST00000533246 ANK2Q01484 3957 aa5.68□□□□□ -1.5
BDNF-218ENST00000533246 RYR1P21817 5038 aa5.66□□□□□ -1.5
BDNF-218ENST00000533246 KMT2AQ03164 3969 aa5.66□□□□□ -1.5
BDNF-218ENST00000533246 INE1O15225 51 aa5.64□□□□□ -1.51
BDNF-218ENST00000533246 CMYA5Q8N3K9 4069 aa5.63□□□□□ -1.51
BDNF-218ENST00000533246 DYNC1H1Q14204 4646 aaKnown RBP5.63□□□□□ -1.51
BDNF-218ENST00000533246 VPS13DQ5THJ4 4388 aa5.62□□□□□ -1.51
BDNF-218ENST00000533246 KIAA1109Q2LD37 5005 aa5.62□□□□□ -1.51
BDNF-218ENST00000533246 DNAH3Q8TD57 4116 aa5.56□□□□□ -1.52
BDNF-218ENST00000533246 FAT3Q8TDW7 4589 aa5.56□□□□□ -1.52
BDNF-218ENST00000533246 DNAH17Q9UFH2 4485 aa5.56□□□□□ -1.52
BDNF-218ENST00000533246 DNAH2Q9P225 4427 aa5.54□□□□□ -1.52
BDNF-218ENST00000533246 LORP23490 312 aaPredicted RBP5.54□□□□□ -1.52
BDNF-218ENST00000533246 SACSQ9NZJ4 4579 aa5.49□□□□□ -1.53
BDNF-218ENST00000533246 VPS13BQ7Z7G8 4022 aa5.48□□□□□ -1.53
BDNF-218ENST00000533246 LRP1Q07954 4544 aaKnown RBP5.46□□□□□ -1.54
BDNF-218ENST00000533246 FRAS1Q86XX4 4008 aa5.42□□□□□ -1.54
BDNF-218ENST00000533246 RYR3Q15413 4870 aa5.41□□□□□ -1.54
BDNF-218ENST00000533246 ALMS1Q8TCU4 4167 aa5.41□□□□□ -1.54
BDNF-218ENST00000533246 DNAH6Q9C0G6 4158 aa5.4□□□□□ -1.55
BDNF-218ENST00000533246 DNAH7Q8WXX0 4024 aa5.39□□□□□ -1.55
BDNF-218ENST00000533246 KRTAP4-1Q9BYQ7 146 aa5.39□□□□□ -1.55
BDNF-218ENST00000533246 HYDINQ4G0P3 5121 aa5.37□□□□□ -1.55
BDNF-218ENST00000533246 APOBP04114 4563 aaKnown RBP5.36□□□□□ -1.55
BDNF-218ENST00000533246 DYNC2H1Q8NCM8 4307 aaKnown RBP5.36□□□□□ -1.55
BDNF-218ENST00000533246 KRTAP23-1A1A580 65 aa5.34□□□□□ -1.55
BDNF-218ENST00000533246 KRTAP17-1Q9BYP8 105 aa5.31□□□□□ -1.56
BDNF-218ENST00000533246 FAT2Q9NYQ8 4349 aa5.29□□□□□ -1.56
BDNF-218ENST00000533246 LRP2P98164 4655 aa5.27□□□□□ -1.57
BDNF-218ENST00000533246 PKHD1P08F94 4074 aa5.25□□□□□ -1.57
BDNF-218ENST00000533246 HECTD4Q9Y4D8 3996 aa5.19□□□□□ -1.58
BDNF-218ENST00000533246 KRTAP10-12P60413 245 aa5.17□□□□□ -1.58
BDNF-218ENST00000533246 LCE3AQ5TA76 89 aa5.15□□□□□ -1.58
BDNF-218ENST00000533246 KMT2CQ8NEZ4 4911 aaKnown RBP5.13□□□□□ -1.59
BDNF-218ENST00000533246 HERC2O95714 4834 aa5.12□□□□□ -1.59
BDNF-218ENST00000533246 KRTAP12-3P60328 96 aa5.09□□□□□ -1.59
BDNF-218ENST00000533246 CRCT1Q9UGL9 99 aa5.06□□□□□ -1.6
BDNF-218ENST00000533246 RYR2Q92736 4967 aa5.06□□□□□ -1.6
BDNF-218ENST00000533246 MT1HP80294 61 aa5.01□□□□□ -1.61
BDNF-218ENST00000533246 PCLOQ9Y6V0 5065 aa5.01□□□□□ -1.61
BDNF-218ENST00000533246 MT2AP02795 61 aa4.98□□□□□ -1.61
BDNF-218ENST00000533246 LPAP08519 4548 aa4.95□□□□□ -1.62
BDNF-218ENST00000533246 MT1FP04733 61 aa4.95□□□□□ -1.62
BDNF-218ENST00000533246 HSPG2P98160 4391 aa4.9□□□□□ -1.62
BDNF-218ENST00000533246 PKD1P98161 4303 aa4.89□□□□□ -1.63
BDNF-218ENST00000533246 EPPK1P58107 5090 aaKnown RBP4.89□□□□□ -1.63
BDNF-218ENST00000533246 SPRR2GQ9BYE4 73 aa4.88□□□□□ -1.63
BDNF-218ENST00000533246 SPRR5A0A1B0GTR4 108 aa4.82□□□□□ -1.64
BDNF-218ENST00000533246 FSIP2Q5CZC0 6907 aa4.82□□□□□ -1.64
BDNF-218ENST00000533246 KRTAP19-1Q8IUB9 90 aa4.8□□□□□ -1.64
BDNF-218ENST00000533246 ABCA13Q86UQ4 5058 aa4.73□□□□□ -1.65
BDNF-218ENST00000533246 KRTAP8-1Q8IUC2 63 aa4.72□□□□□ -1.65
BDNF-218ENST00000533246 PKHD1L1Q86WI1 4243 aa4.7□□□□□ -1.66
BDNF-218ENST00000533246 MUC2Q02817 5179 aa4.7□□□□□ -1.66
BDNF-218ENST00000533246 RNF213Q63HN8 5207 aa4.69□□□□□ -1.66
BDNF-218ENST00000533246 UBR4Q5T4S7 5183 aa4.69□□□□□ -1.66
BDNF-218ENST00000533246 BIRC6Q9NR09 4857 aa4.68□□□□□ -1.66
BDNF-218ENST00000533246 SYNE1Q8NF91 8797 aaKnown RBP4.67□□□□□ -1.66
BDNF-218ENST00000533246 KRTAP19-5Q3LI72 72 aa4.66□□□□□ -1.66
BDNF-218ENST00000533246 HERC1Q15751 4861 aa4.66□□□□□ -1.66
BDNF-218ENST00000533246 KRTAP10-7P60409 375 aaPredicted RBP4.65□□□□□ -1.66
BDNF-218ENST00000533246 LCE2CQ5TA81 110 aa4.64□□□□□ -1.67
BDNF-218ENST00000533246 KRTAP10-5P60370 271 aa4.62□□□□□ -1.67
BDNF-218ENST00000533246 FAT4Q6V0I7 4981 aa4.6□□□□□ -1.67
BDNF-218ENST00000533246 KRTAP9-8Q9BYQ0 159 aa4.6□□□□□ -1.67
BDNF-218ENST00000533246 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
BDNF-218ENST00000533246 TNXBP22105 4242 aa4.57□□□□□ -1.68
BDNF-218ENST00000533246 MT1BP07438 61 aa4.56□□□□□ -1.68
BDNF-218ENST00000533246 MT1XP80297 61 aa4.56□□□□□ -1.68
BDNF-218ENST00000533246 KRTAP19-8Q3LI54 63 aa4.56□□□□□ -1.68
BDNF-218ENST00000533246 MUC17Q685J3 4493 aa4.53□□□□□ -1.68
BDNF-218ENST00000533246 KRTAP4-8A0A0G2JLE6 195 aa4.53□□□□□ -1.68
BDNF-218ENST00000533246 KRTAP4-8Q9BYQ9 185 aa4.53□□□□□ -1.68
BDNF-218ENST00000533246 KRTAP19-2Q3LHN2 52 aa4.52□□□□□ -1.69
BDNF-218ENST00000533246 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
BDNF-218ENST00000533246 SPRR2FQ96RM1 72 aa4.48□□□□□ -1.69
BDNF-218ENST00000533246 KRTAP9-3Q9BYQ3 159 aa4.43□□□□□ -1.7
BDNF-218ENST00000533246 FLGP20930 4061 aaPredicted RBP4.39□□□□□ -1.71
BDNF-218ENST00000533246 HMCN2Q8NDA2 5059 aa4.37□□□□□ -1.71
BDNF-218ENST00000533246 LCE2BO14633 110 aa4.34□□□□□ -1.71
BDNF-218ENST00000533246 KRTAP4-7Q9BYR0 210 aa4.31□□□□□ -1.72
BDNF-218ENST00000533246 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
BDNF-218ENST00000533246 MT1GP13640 62 aa4.25□□□□□ -1.73
BDNF-218ENST00000533246 LCE2DQ5TA82 110 aaPredicted RBP4.22□□□□□ -1.73
BDNF-218ENST00000533246 DSTQ03001 7570 aaKnown RBP4.22□□□□□ -1.73
BDNF-218ENST00000533246 FCGBPQ9Y6R7 5405 aaPredicted RBP4.18□□□□□ -1.74
BDNF-218ENST00000533246 LCE3BQ5TA77 95 aa4.17□□□□□ -1.74
BDNF-218ENST00000533246 USH2AO75445 5202 aa4.16□□□□□ -1.74
BDNF-218ENST00000533246 SPRR2EP22531 72 aa4.06□□□□□ -1.76
BDNF-218ENST00000533246 SPRR2BP35325 72 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms