RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 A6NN06 94 aa10.47□□□□□ -0.73
SMPD1-209ENST00000533196 ATOX1O00244 68 aa10.47□□□□□ -0.73
SMPD1-209ENST00000533196 HIST1H4AP62805 103 aaKnown RBP10.46□□□□□ -0.73
SMPD1-209ENST00000533196 CRIPTQ9P021 101 aa10.44□□□□□ -0.74
SMPD1-209ENST00000533196 A0A087WVE0 104 aa10.4□□□□□ -0.74
SMPD1-209ENST00000533196 H0Y9P7 68 aa10.4□□□□□ -0.74
SMPD1-209ENST00000533196 IMUPQ9GZP8 106 aa10.39□□□□□ -0.75
SMPD1-209ENST00000533196 NDUFC1O43677 76 aa10.34□□□□□ -0.75
SMPD1-209ENST00000533196 KRTAP10-5P60370 271 aa10.34□□□□□ -0.75
SMPD1-209ENST00000533196 LINC00643Q86TS7 51 aa10.34□□□□□ -0.75
SMPD1-209ENST00000533196 A8MUN3 132 aa10.32□□□□□ -0.76
SMPD1-209ENST00000533196 H0YAA0 97 aa10.31□□□□□ -0.76
SMPD1-209ENST00000533196 LINC00208Q96KT6 92 aa10.22□□□□□ -0.77
SMPD1-209ENST00000533196 MP68P56378 58 aa10.21□□□□□ -0.77
SMPD1-209ENST00000533196 OCR1Q9BZK8 76 aa10.18□□□□□ -0.78
SMPD1-209ENST00000533196 NEBP20929 6669 aa10.14□□□□□ -0.79
SMPD1-209ENST00000533196 MUC12Q9UKN1 5478 aa10.12□□□□□ -0.79
SMPD1-209ENST00000533196 ADM2Q7Z4H4 148 aa10.12□□□□□ -0.79
SMPD1-209ENST00000533196 H3BPC8 53 aa10.08□□□□□ -0.8
SMPD1-209ENST00000533196 A0A1B0GV90 55 aa10.05□□□□□ -0.8
SMPD1-209ENST00000533196 KRTAP5-9P26371 169 aa10.04□□□□□ -0.8
SMPD1-209ENST00000533196 J3QR89 54 aa10.02□□□□□ -0.81
SMPD1-209ENST00000533196 C20orf197Q8N268 126 aa9.96□□□□□ -0.82
SMPD1-209ENST00000533196 PRO2289Q9P1D8 64 aa9.96□□□□□ -0.82
SMPD1-209ENST00000533196 DMAC1Q96GE9 116 aa9.95□□□□□ -0.82
SMPD1-209ENST00000533196 SCGB1A1P11684 91 aa9.93□□□□□ -0.82
SMPD1-209ENST00000533196 PLAC4Q8WY50 150 aa9.92□□□□□ -0.82
SMPD1-209ENST00000533196 R4GN34 69 aa9.92□□□□□ -0.82
SMPD1-209ENST00000533196 KMT2DO14686 5537 aa9.89□□□□□ -0.83
SMPD1-209ENST00000533196 P0C880 135 aa9.86□□□□□ -0.83
SMPD1-209ENST00000533196 MT1XP80297 61 aa9.85□□□□□ -0.83
SMPD1-209ENST00000533196 M0QZ58 72 aa9.81□□□□□ -0.84
SMPD1-209ENST00000533196 KRTAP20-1Q3LI63 56 aa9.8□□□□□ -0.84
SMPD1-209ENST00000533196 TRAV7A0A075B6U4 112 aa9.77□□□□□ -0.85
SMPD1-209ENST00000533196 KRTAP3-2Q9BYR7 98 aa9.77□□□□□ -0.85
SMPD1-209ENST00000533196 MDN1Q9NU22 5596 aa9.76□□□□□ -0.85
SMPD1-209ENST00000533196 ACYP2P14621 99 aa9.71□□□□□ -0.86
SMPD1-209ENST00000533196 KRTAP12-2P59991 146 aa9.69□□□□□ -0.86
SMPD1-209ENST00000533196 SMIM20Q8N5G0 67 aa9.69□□□□□ -0.86
SMPD1-209ENST00000533196 SPRR2FQ96RM1 72 aa9.67□□□□□ -0.86
SMPD1-209ENST00000533196 SPTSSBQ8NFR3 76 aa9.64□□□□□ -0.87
SMPD1-209ENST00000533196 LINC01554Q52M75 96 aa9.63□□□□□ -0.87
SMPD1-209ENST00000533196 KRTAP8-1Q8IUC2 63 aa9.62□□□□□ -0.87
SMPD1-209ENST00000533196 MT-ATP8P03928 68 aa9.59□□□□□ -0.87
SMPD1-209ENST00000533196 K7ERU9 68 aa9.55□□□□□ -0.88
SMPD1-209ENST00000533196 SPRR2EP22531 72 aa9.55□□□□□ -0.88
SMPD1-209ENST00000533196 SPRR2BP35325 72 aa9.55□□□□□ -0.88
SMPD1-209ENST00000533196 SPRR2AP35326 72 aa9.55□□□□□ -0.88
SMPD1-209ENST00000533196 KRTAP2-3P0C7H8 128 aa9.54□□□□□ -0.88
SMPD1-209ENST00000533196 KRTAP2-4Q9BYR9 128 aa9.54□□□□□ -0.88
SMPD1-209ENST00000533196 CHKB-CPT1BH3BT56 60 aa9.5□□□□□ -0.89
SMPD1-209ENST00000533196 KRTAP4-8A0A0G2JLE6 195 aa9.42□□□□□ -0.9
SMPD1-209ENST00000533196 LCE1AQ5T7P2 110 aa9.42□□□□□ -0.9
SMPD1-209ENST00000533196 KRTAP4-8Q9BYQ9 185 aa9.42□□□□□ -0.9
SMPD1-209ENST00000533196 SNURFQ9Y675 71 aa9.4□□□□□ -0.9
SMPD1-209ENST00000533196 SPANXA2-OT1Q8N9U9 137 aa9.39□□□□□ -0.91
SMPD1-209ENST00000533196 KRTAP10-7P60409 375 aaPredicted RBP9.38□□□□□ -0.91
SMPD1-209ENST00000533196 KRTAP10-12P60413 245 aa9.38□□□□□ -0.91
SMPD1-209ENST00000533196 SERP2Q8N6R1 65 aa9.26□□□□□ -0.93
SMPD1-209ENST00000533196 SPRR2DP22532 72 aa9.24□□□□□ -0.93
SMPD1-209ENST00000533196 KRTAP2-2Q9BYT5 123 aa9.24□□□□□ -0.93
SMPD1-209ENST00000533196 KRTAP2-1Q9BYU5 128 aa9.24□□□□□ -0.93
SMPD1-209ENST00000533196 KRTAP13-4Q3LI77 160 aa9.15□□□□□ -0.94
SMPD1-209ENST00000533196 CAMK2N1Q7Z7J9 78 aa9.09□□□□□ -0.95
SMPD1-209ENST00000533196 COA5Q86WW8 74 aa9.07□□□□□ -0.96
SMPD1-209ENST00000533196 SEC61GP60059 68 aa9.02□□□□□ -0.97
SMPD1-209ENST00000533196 LCE3BQ5TA77 95 aa9□□□□□ -0.97
SMPD1-209ENST00000533196 SERP1Q9Y6X1 66 aa9□□□□□ -0.97
SMPD1-209ENST00000533196 COX7CP15954 63 aa8.94□□□□□ -0.98
SMPD1-209ENST00000533196 A0A0D9SG42 100 aa8.86□□□□□ -0.99
SMPD1-209ENST00000533196 A0A1B0GU33 70 aa8.84□□□□□ -0.99
SMPD1-209ENST00000533196 H7BZZ5 65 aa8.82□□□□□ -1
SMPD1-209ENST00000533196 SPATA8Q6RVD6 105 aa8.82□□□□□ -1
SMPD1-209ENST00000533196 KRTAP19-7Q3SYF9 63 aa8.81□□□□□ -1
SMPD1-209ENST00000533196 SPINT4Q6UDR6 99 aa8.78□□□□□ -1
SMPD1-209ENST00000533196 LCE5AQ5TCM9 118 aa8.75□□□□□ -1.01
SMPD1-209ENST00000533196 MT1EP04732 61 aa8.74□□□□□ -1.01
SMPD1-209ENST00000533196 CYSTM1Q9H1C7 97 aa8.73□□□□□ -1.01
SMPD1-209ENST00000533196 KRTAP12-1P59990 96 aa8.71□□□□□ -1.02
SMPD1-209ENST00000533196 KRTAP19-3Q7Z4W3 81 aa8.71□□□□□ -1.02
SMPD1-209ENST00000533196 A0A1B0GU69 56 aa8.64□□□□□ -1.03
SMPD1-209ENST00000533196 SMIM26A0A096LP01 95 aa8.63□□□□□ -1.03
SMPD1-209ENST00000533196 DSTQ03001 7570 aaKnown RBP8.59□□□□□ -1.03
SMPD1-209ENST00000533196 KRTAP19-5Q3LI72 72 aa8.54□□□□□ -1.04
SMPD1-209ENST00000533196 MT1GP13640 62 aa8.53□□□□□ -1.04
SMPD1-209ENST00000533196 ANAPC13Q9BS18 74 aa8.52□□□□□ -1.05
SMPD1-209ENST00000533196 PP632Q6XCG6 107 aa8.47□□□□□ -1.05
SMPD1-209ENST00000533196 A8MU10 97 aa8.46□□□□□ -1.06
SMPD1-209ENST00000533196 PRR15LQ9BU68 103 aa8.39□□□□□ -1.07
SMPD1-209ENST00000533196 TNP1P09430 55 aa8.38□□□□□ -1.07
SMPD1-209ENST00000533196 ATP5EP56381 51 aaPredicted RBP8.38□□□□□ -1.07
SMPD1-209ENST00000533196 MT1LQ93083 61 aa8.34□□□□□ -1.07
SMPD1-209ENST00000533196 KRTAP4-9Q9BYQ8 210 aa8.34□□□□□ -1.07
SMPD1-209ENST00000533196 C10orf95Q9H7T3 257 aa8.34□□□□□ -1.07
SMPD1-209ENST00000533196 CCDC179H3BU77 68 aa8.33□□□□□ -1.08
SMPD1-209ENST00000533196 MT1MQ8N339 61 aa8.33□□□□□ -1.08
SMPD1-209ENST00000533196 LCE3AQ5TA76 89 aa8.3□□□□□ -1.08
SMPD1-209ENST00000533196 LINC01558Q9Y6Z2 57 aa8.26□□□□□ -1.09
SMPD1-209ENST00000533196 GPR98Q8WXG9 6306 aa8.23□□□□□ -1.09
SMPD1-209ENST00000533196 LCE4AQ5TA78 99 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms