RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 K7EP34 96 aa6.79□□□□□ -1.32
CHMP4A-204ENST00000530996 NDUFC1O43677 76 aa6.78□□□□□ -1.32
CHMP4A-204ENST00000530996 SPRR2FQ96RM1 72 aa6.77□□□□□ -1.33
CHMP4A-204ENST00000530996 KRTAP2-3P0C7H8 128 aa6.75□□□□□ -1.33
CHMP4A-204ENST00000530996 SPRR2EP22531 72 aa6.75□□□□□ -1.33
CHMP4A-204ENST00000530996 SPRR2BP35325 72 aa6.75□□□□□ -1.33
CHMP4A-204ENST00000530996 SPRR2AP35326 72 aa6.75□□□□□ -1.33
CHMP4A-204ENST00000530996 KRTAP2-4Q9BYR9 128 aa6.75□□□□□ -1.33
CHMP4A-204ENST00000530996 PRO2289Q9P1D8 64 aa6.75□□□□□ -1.33
CHMP4A-204ENST00000530996 A8MUN3 132 aa6.74□□□□□ -1.33
CHMP4A-204ENST00000530996 COL5A1-AS1Q5SY13 56 aa6.74□□□□□ -1.33
CHMP4A-204ENST00000530996 H0YAA0 97 aa6.71□□□□□ -1.34
CHMP4A-204ENST00000530996 ADM2Q7Z4H4 148 aa6.71□□□□□ -1.34
CHMP4A-204ENST00000530996 H0Y9P7 68 aa6.67□□□□□ -1.34
CHMP4A-204ENST00000530996 ACYP1P07311 99 aa6.66□□□□□ -1.34
CHMP4A-204ENST00000530996 ETDBQ3ZM63 59 aa6.66□□□□□ -1.34
CHMP4A-204ENST00000530996 GTF2H5Q6ZYL4 71 aa6.66□□□□□ -1.34
CHMP4A-204ENST00000530996 KRTAP8-1Q8IUC2 63 aa6.66□□□□□ -1.34
CHMP4A-204ENST00000530996 PLAC4Q8WY50 150 aa6.66□□□□□ -1.34
CHMP4A-204ENST00000530996 ATOX1O00244 68 aa6.65□□□□□ -1.34
CHMP4A-204ENST00000530996 LOC105371267A0A1B0GV96 52 aa6.64□□□□□ -1.35
CHMP4A-204ENST00000530996 MT1XP80297 61 aa6.64□□□□□ -1.35
CHMP4A-204ENST00000530996 UQCRQO14949 82 aa6.62□□□□□ -1.35
CHMP4A-204ENST00000530996 HIST1H4AP62805 103 aaKnown RBP6.62□□□□□ -1.35
CHMP4A-204ENST00000530996 F8W1H4 67 aa6.61□□□□□ -1.35
CHMP4A-204ENST00000530996 R4GN34 69 aa6.59□□□□□ -1.35
CHMP4A-204ENST00000530996 ATP5EP2Q5VTU8 51 aa6.57□□□□□ -1.36
CHMP4A-204ENST00000530996 LCE1AQ5T7P2 110 aa6.54□□□□□ -1.36
CHMP4A-204ENST00000530996 C20orf197Q8N268 126 aa6.54□□□□□ -1.36
CHMP4A-204ENST00000530996 M0QZ58 72 aa6.53□□□□□ -1.36
CHMP4A-204ENST00000530996 SPRR2DP22532 72 aa6.53□□□□□ -1.36
CHMP4A-204ENST00000530996 LINC00208Q96KT6 92 aa6.52□□□□□ -1.37
CHMP4A-204ENST00000530996 KRTAP12-2P59991 146 aa6.51□□□□□ -1.37
CHMP4A-204ENST00000530996 KRTAP2-2Q9BYT5 123 aa6.51□□□□□ -1.37
CHMP4A-204ENST00000530996 KRTAP2-1Q9BYU5 128 aa6.51□□□□□ -1.37
CHMP4A-204ENST00000530996 LINC01554Q52M75 96 aa6.49□□□□□ -1.37
CHMP4A-204ENST00000530996 P0C880 135 aa6.48□□□□□ -1.37
CHMP4A-204ENST00000530996 MP68P56378 58 aa6.46□□□□□ -1.38
CHMP4A-204ENST00000530996 FAM240AA0A1B0GVK7 77 aa6.45□□□□□ -1.38
CHMP4A-204ENST00000530996 KRTAP4-8A0A0G2JLE6 195 aa6.44□□□□□ -1.38
CHMP4A-204ENST00000530996 KRTAP4-8Q9BYQ9 185 aa6.44□□□□□ -1.38
CHMP4A-204ENST00000530996 PCP4L1A6NKN8 68 aa6.39□□□□□ -1.39
CHMP4A-204ENST00000530996 KRTAP10-7P60409 375 aaPredicted RBP6.35□□□□□ -1.39
CHMP4A-204ENST00000530996 LCE3BQ5TA77 95 aa6.34□□□□□ -1.39
CHMP4A-204ENST00000530996 LINC00643Q86TS7 51 aa6.34□□□□□ -1.39
CHMP4A-204ENST00000530996 OCR1Q9BZK8 76 aa6.34□□□□□ -1.39
CHMP4A-204ENST00000530996 DMAC1Q96GE9 116 aa6.33□□□□□ -1.4
CHMP4A-204ENST00000530996 MT-ATP8P03928 68 aa6.31□□□□□ -1.4
CHMP4A-204ENST00000530996 KRTAP10-12P60413 245 aa6.28□□□□□ -1.4
CHMP4A-204ENST00000530996 H3BPC8 53 aa6.27□□□□□ -1.41
CHMP4A-204ENST00000530996 SCGB1A1P11684 91 aa6.2□□□□□ -1.42
CHMP4A-204ENST00000530996 TRAV7A0A075B6U4 112 aa6.18□□□□□ -1.42
CHMP4A-204ENST00000530996 SPTSSBQ8NFR3 76 aa6.17□□□□□ -1.42
CHMP4A-204ENST00000530996 ACYP2P14621 99 aa6.13□□□□□ -1.43
CHMP4A-204ENST00000530996 GPR98Q8WXG9 6306 aa6.12□□□□□ -1.43
CHMP4A-204ENST00000530996 CHKB-CPT1BH3BT56 60 aa6.11□□□□□ -1.43
CHMP4A-204ENST00000530996 CAMK2N1Q7Z7J9 78 aa6.05□□□□□ -1.44
CHMP4A-204ENST00000530996 DSTQ03001 7570 aaKnown RBP6.03□□□□□ -1.44
CHMP4A-204ENST00000530996 J3QR89 54 aa6.02□□□□□ -1.45
CHMP4A-204ENST00000530996 KRTAP4-9Q9BYQ8 210 aa5.97□□□□□ -1.45
CHMP4A-204ENST00000530996 A0A1B0GV90 55 aa5.96□□□□□ -1.46
CHMP4A-204ENST00000530996 LCE5AQ5TCM9 118 aa5.94□□□□□ -1.46
CHMP4A-204ENST00000530996 KRTAP13-4Q3LI77 160 aa5.93□□□□□ -1.46
CHMP4A-204ENST00000530996 KRTAP19-3Q7Z4W3 81 aa5.92□□□□□ -1.46
CHMP4A-204ENST00000530996 MT1EP04732 61 aa5.91□□□□□ -1.46
CHMP4A-204ENST00000530996 KRTAP19-7Q3SYF9 63 aa5.91□□□□□ -1.46
CHMP4A-204ENST00000530996 SMIM20Q8N5G0 67 aa5.9□□□□□ -1.46
CHMP4A-204ENST00000530996 LOC100996750A0A140TA64 210 aa5.89□□□□□ -1.47
CHMP4A-204ENST00000530996 KRTAP4-6Q9BYQ5 205 aa5.89□□□□□ -1.47
CHMP4A-204ENST00000530996 SNURFQ9Y675 71 aa5.86□□□□□ -1.47
CHMP4A-204ENST00000530996 CYSTM1Q9H1C7 97 aa5.85□□□□□ -1.47
CHMP4A-204ENST00000530996 SVIPQ8NHG7 77 aa5.83□□□□□ -1.48
CHMP4A-204ENST00000530996 A0A0D9SG42 100 aa5.82□□□□□ -1.48
CHMP4A-204ENST00000530996 LCE1DQ5T752 114 aa5.79□□□□□ -1.48
CHMP4A-204ENST00000530996 SPANXA2-OT1Q8N9U9 137 aa5.77□□□□□ -1.49
CHMP4A-204ENST00000530996 KRTAP19-5Q3LI72 72 aa5.75□□□□□ -1.49
CHMP4A-204ENST00000530996 SPINT4Q6UDR6 99 aa5.75□□□□□ -1.49
CHMP4A-204ENST00000530996 PP632Q6XCG6 107 aa5.75□□□□□ -1.49
CHMP4A-204ENST00000530996 SEC61GP60059 68 aa5.74□□□□□ -1.49
CHMP4A-204ENST00000530996 HMCN1Q96RW7 5635 aa5.73□□□□□ -1.49
CHMP4A-204ENST00000530996 MT4P47944 62 aa5.73□□□□□ -1.49
CHMP4A-204ENST00000530996 MT1GP13640 62 aa5.72□□□□□ -1.49
CHMP4A-204ENST00000530996 SERP1Q9Y6X1 66 aa5.71□□□□□ -1.5
CHMP4A-204ENST00000530996 LCE4AQ5TA78 99 aa5.69□□□□□ -1.5
CHMP4A-204ENST00000530996 SPATA8Q6RVD6 105 aa5.69□□□□□ -1.5
CHMP4A-204ENST00000530996 COA5Q86WW8 74 aa5.69□□□□□ -1.5
CHMP4A-204ENST00000530996 MT1MQ8N339 61 aa5.65□□□□□ -1.5
CHMP4A-204ENST00000530996 AHNAK2Q8IVF2 5795 aa5.63□□□□□ -1.51
CHMP4A-204ENST00000530996 K7ERU9 68 aa5.63□□□□□ -1.51
CHMP4A-204ENST00000530996 A0A1B0GU33 70 aa5.6□□□□□ -1.51
CHMP4A-204ENST00000530996 MT1LQ93083 61 aa5.6□□□□□ -1.51
CHMP4A-204ENST00000530996 KRTAP12-1P59990 96 aa5.59□□□□□ -1.51
CHMP4A-204ENST00000530996 SERP2Q8N6R1 65 aa5.59□□□□□ -1.51
CHMP4A-204ENST00000530996 KRTAP4-3Q9BYR4 195 aa5.54□□□□□ -1.52
CHMP4A-204ENST00000530996 C10orf95Q9H7T3 257 aa5.52□□□□□ -1.53
CHMP4A-204ENST00000530996 LCE3AQ5TA76 89 aa5.5□□□□□ -1.53
CHMP4A-204ENST00000530996 KRTAP5-4Q6L8H1 288 aa5.49□□□□□ -1.53
CHMP4A-204ENST00000530996 SMIM26A0A096LP01 95 aa5.47□□□□□ -1.53
CHMP4A-204ENST00000530996 KRTAP5-10Q6L8G5 202 aa5.47□□□□□ -1.53
CHMP4A-204ENST00000530996 TNP1P09430 55 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms