RNA–Protein interactions for RNA: ENST00000530866.5

LTBP3-218, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 3,756 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-218ENST00000530866 DYNC1H1Q14204 4646 aaKnown RBP6.77□□□□□ -1.33
LTBP3-218ENST00000530866 KMT2CQ8NEZ4 4911 aaKnown RBP6.74□□□□□ -1.33
LTBP3-218ENST00000530866 FAT3Q8TDW7 4589 aa6.72□□□□□ -1.33
LTBP3-218ENST00000530866 LRP1Q07954 4544 aaKnown RBP6.71□□□□□ -1.33
LTBP3-218ENST00000530866 RPS29P62273 56 aaKnown RBP6.7□□□□□ -1.34
LTBP3-218ENST00000530866 TPRXLQ17RH7 258 aa6.7□□□□□ -1.34
LTBP3-218ENST00000530866 S4R3F8 94 aa6.7□□□□□ -1.34
LTBP3-218ENST00000530866 KIAA1109Q2LD37 5005 aa6.69□□□□□ -1.34
LTBP3-218ENST00000530866 FAT2Q9NYQ8 4349 aa6.68□□□□□ -1.34
LTBP3-218ENST00000530866 SACSQ9NZJ4 4579 aa6.67□□□□□ -1.34
LTBP3-218ENST00000530866 APOBP04114 4563 aaKnown RBP6.62□□□□□ -1.35
LTBP3-218ENST00000530866 ALMS1Q8TCU4 4167 aa6.61□□□□□ -1.35
LTBP3-218ENST00000530866 KRTAP3-1Q9BYR8 98 aa6.61□□□□□ -1.35
LTBP3-218ENST00000530866 XP32Q5T750 250 aa6.58□□□□□ -1.36
LTBP3-218ENST00000530866 RYR1P21817 5038 aa6.57□□□□□ -1.36
LTBP3-218ENST00000530866 KRTAP10-8P60410 259 aa6.56□□□□□ -1.36
LTBP3-218ENST00000530866 RYR3Q15413 4870 aa6.55□□□□□ -1.36
LTBP3-218ENST00000530866 KRTAP10-4P60372 401 aaPredicted RBP6.55□□□□□ -1.36
LTBP3-218ENST00000530866 PKD1P98161 4303 aa6.51□□□□□ -1.37
LTBP3-218ENST00000530866 PLAC4Q8WY50 150 aa6.51□□□□□ -1.37
LTBP3-218ENST00000530866 SEC61BP60468 96 aaKnown RBP6.5□□□□□ -1.37
LTBP3-218ENST00000530866 KRTAP15-1Q3LI76 137 aa6.49□□□□□ -1.37
LTBP3-218ENST00000530866 M0QZ58 72 aa6.48□□□□□ -1.37
LTBP3-218ENST00000530866 R4GN34 69 aa6.47□□□□□ -1.37
LTBP3-218ENST00000530866 KRTAP4-5Q9BYR2 181 aa6.47□□□□□ -1.37
LTBP3-218ENST00000530866 CAMK2N1Q7Z7J9 78 aa6.43□□□□□ -1.38
LTBP3-218ENST00000530866 RYR2Q92736 4967 aa6.43□□□□□ -1.38
LTBP3-218ENST00000530866 KRTAP17-1Q9BYP8 105 aa6.39□□□□□ -1.39
LTBP3-218ENST00000530866 KRTAP13-4Q3LI77 160 aa6.37□□□□□ -1.39
LTBP3-218ENST00000530866 MT1HL1P0DM35 61 aa6.36□□□□□ -1.39
LTBP3-218ENST00000530866 KRTAP12-2P59991 146 aa6.35□□□□□ -1.39
LTBP3-218ENST00000530866 LRP2P98164 4655 aa6.34□□□□□ -1.39
LTBP3-218ENST00000530866 EPPK1P58107 5090 aaKnown RBP6.28□□□□□ -1.4
LTBP3-218ENST00000530866 KRTAP10-6P60371 365 aaPredicted RBP6.27□□□□□ -1.41
LTBP3-218ENST00000530866 M0R2T5 61 aa6.27□□□□□ -1.41
LTBP3-218ENST00000530866 HSPG2P98160 4391 aa6.26□□□□□ -1.41
LTBP3-218ENST00000530866 KRTAP3-3Q9BYR6 98 aa6.23□□□□□ -1.41
LTBP3-218ENST00000530866 LPAP08519 4548 aa6.23□□□□□ -1.41
LTBP3-218ENST00000530866 PKHD1L1Q86WI1 4243 aa6.16□□□□□ -1.42
LTBP3-218ENST00000530866 KRTAP3-2Q9BYR7 98 aa6.15□□□□□ -1.42
LTBP3-218ENST00000530866 KRTAP12-1P59990 96 aa6.15□□□□□ -1.42
LTBP3-218ENST00000530866 ABCA13Q86UQ4 5058 aa6.12□□□□□ -1.43
LTBP3-218ENST00000530866 HERC2O95714 4834 aa6.11□□□□□ -1.43
LTBP3-218ENST00000530866 MUC2Q02817 5179 aa6.1□□□□□ -1.43
LTBP3-218ENST00000530866 TNXBP22105 4242 aa5.99□□□□□ -1.45
LTBP3-218ENST00000530866 LORP23490 312 aaPredicted RBP5.97□□□□□ -1.45
LTBP3-218ENST00000530866 KRTAP4-1Q9BYQ7 146 aa5.96□□□□□ -1.46
LTBP3-218ENST00000530866 HERC1Q15751 4861 aa5.91□□□□□ -1.46
LTBP3-218ENST00000530866 RNF213Q63HN8 5207 aa5.88□□□□□ -1.47
LTBP3-218ENST00000530866 PP632Q6XCG6 107 aa5.88□□□□□ -1.47
LTBP3-218ENST00000530866 TNP1P09430 55 aa5.85□□□□□ -1.47
LTBP3-218ENST00000530866 BIRC6Q9NR09 4857 aa5.84□□□□□ -1.47
LTBP3-218ENST00000530866 FAT4Q6V0I7 4981 aa5.83□□□□□ -1.48
LTBP3-218ENST00000530866 KRTAP10-10P60014 251 aa5.76□□□□□ -1.49
LTBP3-218ENST00000530866 PRO2289Q9P1D8 64 aa5.73□□□□□ -1.49
LTBP3-218ENST00000530866 PCLOQ9Y6V0 5065 aa5.73□□□□□ -1.49
LTBP3-218ENST00000530866 UBR4Q5T4S7 5183 aa5.69□□□□□ -1.5
LTBP3-218ENST00000530866 INE1O15225 51 aa5.48□□□□□ -1.53
LTBP3-218ENST00000530866 FSIP2Q5CZC0 6907 aa5.47□□□□□ -1.53
LTBP3-218ENST00000530866 HMCN2Q8NDA2 5059 aa5.46□□□□□ -1.53
LTBP3-218ENST00000530866 MUC17Q685J3 4493 aa5.43□□□□□ -1.54
LTBP3-218ENST00000530866 MT1HP80294 61 aa5.39□□□□□ -1.55
LTBP3-218ENST00000530866 KRTAP19-2Q3LHN2 52 aa5.35□□□□□ -1.55
LTBP3-218ENST00000530866 FLGP20930 4061 aaPredicted RBP5.31□□□□□ -1.56
LTBP3-218ENST00000530866 MT1FP04733 61 aa5.31□□□□□ -1.56
LTBP3-218ENST00000530866 LCE3AQ5TA76 89 aa5.3□□□□□ -1.56
LTBP3-218ENST00000530866 LCE2CQ5TA81 110 aa5.29□□□□□ -1.56
LTBP3-218ENST00000530866 MT2AP02795 61 aa5.28□□□□□ -1.56
LTBP3-218ENST00000530866 USH2AO75445 5202 aa5.25□□□□□ -1.57
LTBP3-218ENST00000530866 KRTAP19-1Q8IUB9 90 aa5.22□□□□□ -1.57
LTBP3-218ENST00000530866 SPRR2GQ9BYE4 73 aa5.14□□□□□ -1.59
LTBP3-218ENST00000530866 KRTAP10-12P60413 245 aa5.12□□□□□ -1.59
LTBP3-218ENST00000530866 KRTAP9-8Q9BYQ0 159 aa5.1□□□□□ -1.59
LTBP3-218ENST00000530866 KRTAP12-3P60328 96 aa5.07□□□□□ -1.6
LTBP3-218ENST00000530866 KMT2DO14686 5537 aa5.03□□□□□ -1.6
LTBP3-218ENST00000530866 KRTAP10-7P60409 375 aaPredicted RBP4.96□□□□□ -1.61
LTBP3-218ENST00000530866 SPRR5A0A1B0GTR4 108 aa4.96□□□□□ -1.62
LTBP3-218ENST00000530866 MT1BP07438 61 aa4.96□□□□□ -1.62
LTBP3-218ENST00000530866 MT1XP80297 61 aa4.92□□□□□ -1.62
LTBP3-218ENST00000530866 KRTAP23-1A1A580 65 aa4.91□□□□□ -1.62
LTBP3-218ENST00000530866 KRTAP10-5P60370 271 aa4.9□□□□□ -1.62
LTBP3-218ENST00000530866 KRTAP9-3Q9BYQ3 159 aa4.88□□□□□ -1.63
LTBP3-218ENST00000530866 CRCT1Q9UGL9 99 aa4.88□□□□□ -1.63
LTBP3-218ENST00000530866 KRTAP19-8Q3LI54 63 aa4.88□□□□□ -1.63
LTBP3-218ENST00000530866 OBSCNQ5VST9 7968 aa4.86□□□□□ -1.63
LTBP3-218ENST00000530866 KRTAP4-8A0A0G2JLE6 195 aa4.86□□□□□ -1.63
LTBP3-218ENST00000530866 KRTAP4-8Q9BYQ9 185 aa4.86□□□□□ -1.63
LTBP3-218ENST00000530866 LCE2BO14633 110 aa4.83□□□□□ -1.64
LTBP3-218ENST00000530866 KRTAP19-5Q3LI72 72 aa4.81□□□□□ -1.64
LTBP3-218ENST00000530866 DSTQ03001 7570 aaKnown RBP4.81□□□□□ -1.64
LTBP3-218ENST00000530866 KRTAP8-1Q8IUC2 63 aa4.8□□□□□ -1.64
LTBP3-218ENST00000530866 LCE2AQ5TA79 106 aaPredicted RBP4.77□□□□□ -1.65
LTBP3-218ENST00000530866 SYNE1Q8NF91 8797 aaKnown RBP4.7□□□□□ -1.66
LTBP3-218ENST00000530866 KRTAP4-7Q9BYR0 210 aa4.66□□□□□ -1.66
LTBP3-218ENST00000530866 FCGBPQ9Y6R7 5405 aaPredicted RBP4.65□□□□□ -1.67
LTBP3-218ENST00000530866 LCE3CQ5T5A8 94 aa4.59□□□□□ -1.68
LTBP3-218ENST00000530866 MUC12Q9UKN1 5478 aa4.55□□□□□ -1.68
LTBP3-218ENST00000530866 SSPOA2VEC9 5147 aa4.5□□□□□ -1.69
LTBP3-218ENST00000530866 SPRR2FQ96RM1 72 aa4.44□□□□□ -1.7
LTBP3-218ENST00000530866 KRTAP12-4P60329 112 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms