RNA–Protein interactions for RNA: ENST00000530727.5

PTPRC-214, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 1,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-214ENST00000530727 DSCR8Q96T75 97 aa2.27□□□□□ -2.05
PTPRC-214ENST00000530727 LINC00846Q9NV44 126 aa2.27□□□□□ -2.05
PTPRC-214ENST00000530727 IGFL1Q6UW32 110 aa2.26□□□□□ -2.05
PTPRC-214ENST00000530727 CASC2Q6XLA1 102 aa2.26□□□□□ -2.05
PTPRC-214ENST00000530727 LRP1Q07954 4544 aaKnown RBP2.26□□□□□ -2.05
PTPRC-214ENST00000530727 TNXBP22105 4242 aa2.25□□□□□ -2.05
PTPRC-214ENST00000530727 A0A0G2JQZ4 141 aa2.25□□□□□ -2.05
PTPRC-214ENST00000530727 KRTAP5-5Q701N2 237 aaPredicted RBP2.25□□□□□ -2.05
PTPRC-214ENST00000530727 FAT3Q8TDW7 4589 aa2.25□□□□□ -2.05
PTPRC-214ENST00000530727 SMR3BP02814 79 aaPredicted RBP2.25□□□□□ -2.05
PTPRC-214ENST00000530727 RPL37AP61513 92 aaKnown RBP2.25□□□□□ -2.05
PTPRC-214ENST00000530727 Q6JHZ5 121 aa2.25□□□□□ -2.05
PTPRC-214ENST00000530727 MT-ATP8P03928 68 aa2.24□□□□□ -2.05
PTPRC-214ENST00000530727 P0C880 135 aa2.24□□□□□ -2.05
PTPRC-214ENST00000530727 LINC00643Q86TS7 51 aa2.24□□□□□ -2.05
PTPRC-214ENST00000530727 MYCBP2O75592 4640 aa2.24□□□□□ -2.05
PTPRC-214ENST00000530727 A0A087WSZ3 146 aa2.23□□□□□ -2.05
PTPRC-214ENST00000530727 TRBV7-7A0A0K0K1E9 115 aa2.23□□□□□ -2.05
PTPRC-214ENST00000530727 F8WEM9 126 aa2.23□□□□□ -2.05
PTPRC-214ENST00000530727 KRTAP13-2Q52LG2 175 aa2.23□□□□□ -2.05
PTPRC-214ENST00000530727 SPINK6Q6UWN8 80 aa2.23□□□□□ -2.05
PTPRC-214ENST00000530727 PRO2289Q9P1D8 64 aa2.23□□□□□ -2.05
PTPRC-214ENST00000530727 MIR22HGQ0VDD5 57 aa2.23□□□□□ -2.05
PTPRC-214ENST00000530727 SSBP3-AS1Q7Z2R9 100 aa2.22□□□□□ -2.05
PTPRC-214ENST00000530727 UBL5Q9BZL1 73 aa2.21□□□□□ -2.05
PTPRC-214ENST00000530727 ATP5EP2Q5VTU8 51 aa2.21□□□□□ -2.06
PTPRC-214ENST00000530727 LINC00472Q9H8W2 130 aa2.21□□□□□ -2.06
PTPRC-214ENST00000530727 BIRC6Q9NR09 4857 aa2.2□□□□□ -2.06
PTPRC-214ENST00000530727 NREPQ16612 68 aa2.2□□□□□ -2.06
PTPRC-214ENST00000530727 Q96NJ1 140 aa2.2□□□□□ -2.06
PTPRC-214ENST00000530727 HERC2O95714 4834 aa2.2□□□□□ -2.06
PTPRC-214ENST00000530727 IGKV3D-7A0A0C4DH55 119 aa2.19□□□□□ -2.06
PTPRC-214ENST00000530727 Q5VSD8 79 aa2.19□□□□□ -2.06
PTPRC-214ENST00000530727 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
PTPRC-214ENST00000530727 FLG2Q5D862 2391 aaPredicted RBP2.18□□□□□ -2.06
PTPRC-214ENST00000530727 IGKV4-1P06312 121 aa2.18□□□□□ -2.06
PTPRC-214ENST00000530727 ABCA13Q86UQ4 5058 aa2.18□□□□□ -2.06
PTPRC-214ENST00000530727 A0A087WVE0 104 aa2.18□□□□□ -2.06
PTPRC-214ENST00000530727 TPRXLQ17RH7 258 aa2.18□□□□□ -2.06
PTPRC-214ENST00000530727 RPS29P62273 56 aaKnown RBP2.17□□□□□ -2.06
PTPRC-214ENST00000530727 K7EQZ3 153 aa2.16□□□□□ -2.06
PTPRC-214ENST00000530727 SPINK1P00995 79 aa2.16□□□□□ -2.06
PTPRC-214ENST00000530727 COX7CP15954 63 aa2.16□□□□□ -2.06
PTPRC-214ENST00000530727 SPAG11AQ6PDA7 123 aa2.16□□□□□ -2.06
PTPRC-214ENST00000530727 DMBT1Q9UGM3 2413 aaPredicted RBP2.15□□□□□ -2.06
PTPRC-214ENST00000530727 MT1HL1P0DM35 61 aa2.15□□□□□ -2.07
PTPRC-214ENST00000530727 LINC00304Q8N9R0 145 aa2.15□□□□□ -2.07
PTPRC-214ENST00000530727 Q1T7F1 81 aa2.14□□□□□ -2.07
PTPRC-214ENST00000530727 PP632Q6XCG6 107 aa2.14□□□□□ -2.07
PTPRC-214ENST00000530727 SPTSSBQ8NFR3 76 aa2.14□□□□□ -2.07
PTPRC-214ENST00000530727 MMP24-AS1A0A0U1RRL7 71 aa2.14□□□□□ -2.07
PTPRC-214ENST00000530727 ATP5EP56381 51 aaPredicted RBP2.14□□□□□ -2.07
PTPRC-214ENST00000530727 LIMD2Q9BT23 127 aa2.14□□□□□ -2.07
PTPRC-214ENST00000530727 PCLOQ9Y6V0 5065 aa2.13□□□□□ -2.07
PTPRC-214ENST00000530727 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
PTPRC-214ENST00000530727 HCG22E2RYF7 251 aa2.13□□□□□ -2.07
PTPRC-214ENST00000530727 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
PTPRC-214ENST00000530727 LCE1BQ5T7P3 118 aa2.13□□□□□ -2.07
PTPRC-214ENST00000530727 ATOX1O00244 68 aa2.12□□□□□ -2.07
PTPRC-214ENST00000530727 CSAG1Q6PB30 78 aa2.12□□□□□ -2.07
PTPRC-214ENST00000530727 NDUFB1O75438 58 aa2.12□□□□□ -2.07
PTPRC-214ENST00000530727 SERP2Q8N6R1 65 aa2.11□□□□□ -2.07
PTPRC-214ENST00000530727 WFDC13Q8IUB5 93 aa2.1□□□□□ -2.07
PTPRC-214ENST00000530727 MRPL34Q9BQ48 92 aaKnown RBP2.09□□□□□ -2.07
PTPRC-214ENST00000530727 HERC1Q15751 4861 aa2.09□□□□□ -2.07
PTPRC-214ENST00000530727 LPAP08519 4548 aa2.09□□□□□ -2.07
PTPRC-214ENST00000530727 LRP2P98164 4655 aa2.09□□□□□ -2.07
PTPRC-214ENST00000530727 CYSTM1Q9H1C7 97 aa2.08□□□□□ -2.08
PTPRC-214ENST00000530727 KLKP1Q107X0 134 aa2.07□□□□□ -2.08
PTPRC-214ENST00000530727 ZCCHC13Q8WW36 166 aaKnown RBP2.07□□□□□ -2.08
PTPRC-214ENST00000530727 TP53AIP1Q9HCN2 124 aa2.07□□□□□ -2.08
PTPRC-214ENST00000530727 UBR4Q5T4S7 5183 aa2.06□□□□□ -2.08
PTPRC-214ENST00000530727 C20orf197Q8N268 126 aa2.06□□□□□ -2.08
PTPRC-214ENST00000530727 CDC42SE1Q9NRR8 79 aa2.06□□□□□ -2.08
PTPRC-214ENST00000530727 DMAC1Q96GE9 116 aa2.05□□□□□ -2.08
PTPRC-214ENST00000530727 HMCN2Q8NDA2 5059 aa2.05□□□□□ -2.08
PTPRC-214ENST00000530727 TRAV22A0A0B4J277 110 aa2.05□□□□□ -2.08
PTPRC-214ENST00000530727 C9orf92A6NGG3 77 aa2.05□□□□□ -2.08
PTPRC-214ENST00000530727 H7BZZ5 65 aa2.05□□□□□ -2.08
PTPRC-214ENST00000530727 H0Y9P7 68 aa2.04□□□□□ -2.08
PTPRC-214ENST00000530727 SNURFQ9Y675 71 aa2.04□□□□□ -2.08
PTPRC-214ENST00000530727 CYP4F30PQ9H0H9 118 aa2.03□□□□□ -2.08
PTPRC-214ENST00000530727 LINC00208Q96KT6 92 aa2.03□□□□□ -2.08
PTPRC-214ENST00000530727 MUC17Q685J3 4493 aa2.02□□□□□ -2.09
PTPRC-214ENST00000530727 NDUFC1O43677 76 aa2.02□□□□□ -2.09
PTPRC-214ENST00000530727 COA5Q86WW8 74 aa2.02□□□□□ -2.09
PTPRC-214ENST00000530727 KRTAP10-10P60014 251 aa2.01□□□□□ -2.09
PTPRC-214ENST00000530727 RPL37P61927 97 aaKnown RBP2.01□□□□□ -2.09
PTPRC-214ENST00000530727 LOC101927531A0A1B0GV80 90 aa2.01□□□□□ -2.09
PTPRC-214ENST00000530727 SPRR5A0A1B0GTR4 108 aa1.99□□□□□ -2.09
PTPRC-214ENST00000530727 PCOTHQ58A44 107 aa1.98□□□□□ -2.09
PTPRC-214ENST00000530727 MUC2Q02817 5179 aa1.98□□□□□ -2.09
PTPRC-214ENST00000530727 SPINK7P58062 85 aa1.98□□□□□ -2.09
PTPRC-214ENST00000530727 CHKB-CPT1BH3BT56 60 aa1.96□□□□□ -2.1
PTPRC-214ENST00000530727 Q5VV11 94 aa1.96□□□□□ -2.1
PTPRC-214ENST00000530727 KRTAP4-1Q9BYQ7 146 aa1.95□□□□□ -2.1
PTPRC-214ENST00000530727 INE1O15225 51 aa1.94□□□□□ -2.1
PTPRC-214ENST00000530727 KRTAP19-2Q3LHN2 52 aa1.93□□□□□ -2.1
PTPRC-214ENST00000530727 COX6B2Q6YFQ2 88 aa1.92□□□□□ -2.1
PTPRC-214ENST00000530727 RNF213Q63HN8 5207 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms