RNA–Protein interactions for RNA: ENST00000530642.1

FOXRED1-210, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 2

Gene FOXRED1, Length 3,045 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-210ENST00000530642 LRP1Q07954 4544 aaKnown RBP4.91□□□□□ -1.62
FOXRED1-210ENST00000530642 LINC00304Q8N9R0 145 aa4.91□□□□□ -1.62
FOXRED1-210ENST00000530642 NDUFAF8A1L188 74 aa4.9□□□□□ -1.62
FOXRED1-210ENST00000530642 KIAA1109Q2LD37 5005 aa4.9□□□□□ -1.62
FOXRED1-210ENST00000530642 EPPK1P58107 5090 aaKnown RBP4.87□□□□□ -1.63
FOXRED1-210ENST00000530642 MYCBP2O75592 4640 aa4.87□□□□□ -1.63
FOXRED1-210ENST00000530642 A0A1B0GVY2 172 aa4.87□□□□□ -1.63
FOXRED1-210ENST00000530642 SSBP3-AS1Q7Z2R9 100 aa4.86□□□□□ -1.63
FOXRED1-210ENST00000530642 IGKV2D-30A0A075B6S6 120 aa4.86□□□□□ -1.63
FOXRED1-210ENST00000530642 IGKV2-30P06310 120 aa4.86□□□□□ -1.63
FOXRED1-210ENST00000530642 H0YAA0 97 aa4.85□□□□□ -1.63
FOXRED1-210ENST00000530642 KRTAP1-4P0C5Y4 121 aa4.83□□□□□ -1.64
FOXRED1-210ENST00000530642 KRTAP13-2Q52LG2 175 aa4.83□□□□□ -1.64
FOXRED1-210ENST00000530642 FAT3Q8TDW7 4589 aa4.81□□□□□ -1.64
FOXRED1-210ENST00000530642 HSPG2P98160 4391 aa4.77□□□□□ -1.65
FOXRED1-210ENST00000530642 SPINT4Q6UDR6 99 aa4.76□□□□□ -1.65
FOXRED1-210ENST00000530642 KRTAP10-4P60372 401 aaPredicted RBP4.76□□□□□ -1.65
FOXRED1-210ENST00000530642 TYMSOSQ8TAI1 123 aa4.76□□□□□ -1.65
FOXRED1-210ENST00000530642 RYR1P21817 5038 aa4.74□□□□□ -1.65
FOXRED1-210ENST00000530642 KRTAP17-1Q9BYP8 105 aa4.74□□□□□ -1.65
FOXRED1-210ENST00000530642 PKHD1L1Q86WI1 4243 aa4.72□□□□□ -1.65
FOXRED1-210ENST00000530642 C9orf92A6NGG3 77 aa4.7□□□□□ -1.66
FOXRED1-210ENST00000530642 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
FOXRED1-210ENST00000530642 TPRXLQ17RH7 258 aa4.69□□□□□ -1.66
FOXRED1-210ENST00000530642 A0A1B0GU33 70 aa4.68□□□□□ -1.66
FOXRED1-210ENST00000530642 RPS29P62273 56 aaKnown RBP4.68□□□□□ -1.66
FOXRED1-210ENST00000530642 Q5VSD8 79 aa4.66□□□□□ -1.66
FOXRED1-210ENST00000530642 ABCA13Q86UQ4 5058 aa4.66□□□□□ -1.66
FOXRED1-210ENST00000530642 C10orf95Q9H7T3 257 aa4.65□□□□□ -1.67
FOXRED1-210ENST00000530642 H1FX-AS1Q4G0G2 97 aa4.64□□□□□ -1.67
FOXRED1-210ENST00000530642 LPAP08519 4548 aa4.61□□□□□ -1.67
FOXRED1-210ENST00000530642 TNXBP22105 4242 aa4.61□□□□□ -1.67
FOXRED1-210ENST00000530642 KRTAP4-5Q9BYR2 181 aa4.6□□□□□ -1.67
FOXRED1-210ENST00000530642 A0A0D9SG42 100 aa4.58□□□□□ -1.68
FOXRED1-210ENST00000530642 KRTAP10-8P60410 259 aa4.57□□□□□ -1.68
FOXRED1-210ENST00000530642 LRP2P98164 4655 aa4.57□□□□□ -1.68
FOXRED1-210ENST00000530642 COX6B2Q6YFQ2 88 aa4.55□□□□□ -1.68
FOXRED1-210ENST00000530642 MUC2Q02817 5179 aa4.54□□□□□ -1.68
FOXRED1-210ENST00000530642 HERC2O95714 4834 aa4.54□□□□□ -1.68
FOXRED1-210ENST00000530642 HERC1Q15751 4861 aa4.5□□□□□ -1.69
FOXRED1-210ENST00000530642 MT1HL1P0DM35 61 aa4.48□□□□□ -1.69
FOXRED1-210ENST00000530642 RPL37P61927 97 aaKnown RBP4.47□□□□□ -1.69
FOXRED1-210ENST00000530642 KRTAP13-4Q3LI77 160 aa4.46□□□□□ -1.69
FOXRED1-210ENST00000530642 PCLOQ9Y6V0 5065 aa4.45□□□□□ -1.7
FOXRED1-210ENST00000530642 R4GN34 69 aa4.44□□□□□ -1.7
FOXRED1-210ENST00000530642 RNF213Q63HN8 5207 aa4.38□□□□□ -1.71
FOXRED1-210ENST00000530642 KRTAP10-6P60371 365 aaPredicted RBP4.38□□□□□ -1.71
FOXRED1-210ENST00000530642 XP32Q5T750 250 aa4.37□□□□□ -1.71
FOXRED1-210ENST00000530642 BIRC6Q9NR09 4857 aa4.35□□□□□ -1.71
FOXRED1-210ENST00000530642 KRTAP12-2P59991 146 aa4.34□□□□□ -1.71
FOXRED1-210ENST00000530642 S4R3F8 94 aa4.34□□□□□ -1.72
FOXRED1-210ENST00000530642 PRO2289Q9P1D8 64 aa4.32□□□□□ -1.72
FOXRED1-210ENST00000530642 UBR4Q5T4S7 5183 aa4.3□□□□□ -1.72
FOXRED1-210ENST00000530642 FAT4Q6V0I7 4981 aa4.29□□□□□ -1.72
FOXRED1-210ENST00000530642 PLAC4Q8WY50 150 aa4.24□□□□□ -1.73
FOXRED1-210ENST00000530642 KRTAP12-1P59990 96 aa4.23□□□□□ -1.73
FOXRED1-210ENST00000530642 KRTAP9-4Q9BYQ2 154 aa4.22□□□□□ -1.73
FOXRED1-210ENST00000530642 LCE5AQ5TCM9 118 aa4.22□□□□□ -1.73
FOXRED1-210ENST00000530642 HMCN2Q8NDA2 5059 aa4.17□□□□□ -1.74
FOXRED1-210ENST00000530642 KRTAP4-1Q9BYQ7 146 aa4.16□□□□□ -1.74
FOXRED1-210ENST00000530642 MUC17Q685J3 4493 aa4.15□□□□□ -1.75
FOXRED1-210ENST00000530642 KRTAP9-9Q9BYP9 154 aa4.13□□□□□ -1.75
FOXRED1-210ENST00000530642 LCE4AQ5TA78 99 aa4.12□□□□□ -1.75
FOXRED1-210ENST00000530642 KRTAP19-4Q3LI73 84 aa4.1□□□□□ -1.75
FOXRED1-210ENST00000530642 KRTAP9-6A0A140TA67 174 aa4.08□□□□□ -1.76
FOXRED1-210ENST00000530642 KRTAP9-7A8MTY7 169 aa4.08□□□□□ -1.76
FOXRED1-210ENST00000530642 M0QZ58 72 aa4.01□□□□□ -1.77
FOXRED1-210ENST00000530642 KRTAP19-2Q3LHN2 52 aa4.01□□□□□ -1.77
FOXRED1-210ENST00000530642 FLGP20930 4061 aaPredicted RBP3.94□□□□□ -1.78
FOXRED1-210ENST00000530642 M0R2T5 61 aa3.9□□□□□ -1.78
FOXRED1-210ENST00000530642 INE1O15225 51 aa3.9□□□□□ -1.78
FOXRED1-210ENST00000530642 FSIP2Q5CZC0 6907 aa3.87□□□□□ -1.79
FOXRED1-210ENST00000530642 USH2AO75445 5202 aa3.85□□□□□ -1.79
FOXRED1-210ENST00000530642 SPRR5A0A1B0GTR4 108 aa3.83□□□□□ -1.8
FOXRED1-210ENST00000530642 PP632Q6XCG6 107 aa3.82□□□□□ -1.8
FOXRED1-210ENST00000530642 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
FOXRED1-210ENST00000530642 MT1HP80294 61 aa3.76□□□□□ -1.81
FOXRED1-210ENST00000530642 KRTAP19-1Q8IUB9 90 aa3.71□□□□□ -1.81
FOXRED1-210ENST00000530642 KRTAP9-3Q9BYQ3 159 aa3.71□□□□□ -1.81
FOXRED1-210ENST00000530642 KRTAP10-10P60014 251 aa3.7□□□□□ -1.82
FOXRED1-210ENST00000530642 MT1FP04733 61 aa3.65□□□□□ -1.83
FOXRED1-210ENST00000530642 LCE1AQ5T7P2 110 aa3.65□□□□□ -1.83
FOXRED1-210ENST00000530642 KRTAP9-8Q9BYQ0 159 aa3.65□□□□□ -1.83
FOXRED1-210ENST00000530642 MT2AP02795 61 aa3.64□□□□□ -1.83
FOXRED1-210ENST00000530642 SPRR2GQ9BYE4 73 aa3.63□□□□□ -1.83
FOXRED1-210ENST00000530642 KRTAP2-2Q9BYT5 123 aa3.63□□□□□ -1.83
FOXRED1-210ENST00000530642 KMT2DO14686 5537 aa3.63□□□□□ -1.83
FOXRED1-210ENST00000530642 TNP1P09430 55 aa3.59□□□□□ -1.84
FOXRED1-210ENST00000530642 LCE3CQ5T5A8 94 aa3.57□□□□□ -1.84
FOXRED1-210ENST00000530642 KRTAP19-8Q3LI54 63 aa3.51□□□□□ -1.85
FOXRED1-210ENST00000530642 MT1BP07438 61 aa3.46□□□□□ -1.85
FOXRED1-210ENST00000530642 LCE3AQ5TA76 89 aa3.45□□□□□ -1.86
FOXRED1-210ENST00000530642 SSPOA2VEC9 5147 aa3.41□□□□□ -1.86
FOXRED1-210ENST00000530642 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.87
FOXRED1-210ENST00000530642 KRTAP10-5P60370 271 aa3.38□□□□□ -1.87
FOXRED1-210ENST00000530642 MT1XP80297 61 aa3.38□□□□□ -1.87
FOXRED1-210ENST00000530642 KRTAP10-7P60409 375 aaPredicted RBP3.33□□□□□ -1.88
FOXRED1-210ENST00000530642 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
FOXRED1-210ENST00000530642 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
FOXRED1-210ENST00000530642 MT3P25713 68 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms