RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 TRAV22A0A0B4J277 110 aa8.83□□□□□ -1
TSPAN4-219ENST00000530404 KRTAP2-3P0C7H8 128 aa8.81□□□□□ -1
TSPAN4-219ENST00000530404 SPRR2FQ96RM1 72 aa8.81□□□□□ -1
TSPAN4-219ENST00000530404 KRTAP2-4Q9BYR9 128 aa8.81□□□□□ -1
TSPAN4-219ENST00000530404 LOC101927531A0A1B0GV80 90 aa8.8□□□□□ -1
TSPAN4-219ENST00000530404 COL5A1-AS1Q5SY13 56 aa8.8□□□□□ -1
TSPAN4-219ENST00000530404 NDUFC1O43677 76 aa8.77□□□□□ -1.01
TSPAN4-219ENST00000530404 SPRR2EP22531 72 aa8.77□□□□□ -1.01
TSPAN4-219ENST00000530404 SPRR2BP35325 72 aa8.77□□□□□ -1.01
TSPAN4-219ENST00000530404 SPRR2AP35326 72 aa8.77□□□□□ -1.01
TSPAN4-219ENST00000530404 H0YAA0 97 aa8.75□□□□□ -1.01
TSPAN4-219ENST00000530404 ADM2Q7Z4H4 148 aa8.75□□□□□ -1.01
TSPAN4-219ENST00000530404 MT1XP80297 61 aa8.73□□□□□ -1.01
TSPAN4-219ENST00000530404 ETDBQ3ZM63 59 aa8.73□□□□□ -1.01
TSPAN4-219ENST00000530404 A8MUN3 132 aa8.72□□□□□ -1.01
TSPAN4-219ENST00000530404 PRO2289Q9P1D8 64 aa8.69□□□□□ -1.02
TSPAN4-219ENST00000530404 H0Y9P7 68 aa8.68□□□□□ -1.02
TSPAN4-219ENST00000530404 GTF2H5Q6ZYL4 71 aa8.66□□□□□ -1.02
TSPAN4-219ENST00000530404 F8W1H4 67 aa8.65□□□□□ -1.02
TSPAN4-219ENST00000530404 KRTAP8-1Q8IUC2 63 aa8.65□□□□□ -1.02
TSPAN4-219ENST00000530404 UQCRQO14949 82 aa8.63□□□□□ -1.03
TSPAN4-219ENST00000530404 ACYP1P07311 99 aa8.63□□□□□ -1.03
TSPAN4-219ENST00000530404 PLAC4Q8WY50 150 aa8.62□□□□□ -1.03
TSPAN4-219ENST00000530404 ATOX1O00244 68 aa8.59□□□□□ -1.03
TSPAN4-219ENST00000530404 HIST1H4AP62805 103 aaKnown RBP8.59□□□□□ -1.03
TSPAN4-219ENST00000530404 LCE1AQ5T7P2 110 aa8.58□□□□□ -1.04
TSPAN4-219ENST00000530404 KRTAP12-2P59991 146 aa8.52□□□□□ -1.05
TSPAN4-219ENST00000530404 KRTAP4-8A0A0G2JLE6 195 aa8.51□□□□□ -1.05
TSPAN4-219ENST00000530404 P0C880 135 aa8.51□□□□□ -1.05
TSPAN4-219ENST00000530404 KRTAP4-8Q9BYQ9 185 aa8.51□□□□□ -1.05
TSPAN4-219ENST00000530404 KRTAP2-2Q9BYT5 123 aa8.51□□□□□ -1.05
TSPAN4-219ENST00000530404 KRTAP2-1Q9BYU5 128 aa8.51□□□□□ -1.05
TSPAN4-219ENST00000530404 R4GN34 69 aa8.51□□□□□ -1.05
TSPAN4-219ENST00000530404 ATP5EP2Q5VTU8 51 aa8.5□□□□□ -1.05
TSPAN4-219ENST00000530404 LINC00208Q96KT6 92 aa8.5□□□□□ -1.05
TSPAN4-219ENST00000530404 PCP4L1A6NKN8 68 aa8.48□□□□□ -1.05
TSPAN4-219ENST00000530404 SPRR2DP22532 72 aa8.48□□□□□ -1.05
TSPAN4-219ENST00000530404 M0QZ58 72 aa8.46□□□□□ -1.06
TSPAN4-219ENST00000530404 FAM240AA0A1B0GVK7 77 aa8.41□□□□□ -1.06
TSPAN4-219ENST00000530404 LINC01554Q52M75 96 aa8.39□□□□□ -1.07
TSPAN4-219ENST00000530404 C20orf197Q8N268 126 aa8.38□□□□□ -1.07
TSPAN4-219ENST00000530404 KRTAP10-7P60409 375 aaPredicted RBP8.36□□□□□ -1.07
TSPAN4-219ENST00000530404 MP68P56378 58 aa8.35□□□□□ -1.07
TSPAN4-219ENST00000530404 KRTAP3-2Q9BYR7 98 aa8.35□□□□□ -1.07
TSPAN4-219ENST00000530404 OCR1Q9BZK8 76 aa8.33□□□□□ -1.08
TSPAN4-219ENST00000530404 LINC00643Q86TS7 51 aa8.28□□□□□ -1.08
TSPAN4-219ENST00000530404 LCE3BQ5TA77 95 aa8.27□□□□□ -1.09
TSPAN4-219ENST00000530404 KRTAP10-12P60413 245 aa8.26□□□□□ -1.09
TSPAN4-219ENST00000530404 DMAC1Q96GE9 116 aa8.25□□□□□ -1.09
TSPAN4-219ENST00000530404 H3BPC8 53 aa8.14□□□□□ -1.11
TSPAN4-219ENST00000530404 MT-ATP8P03928 68 aa8.11□□□□□ -1.11
TSPAN4-219ENST00000530404 A0A1B0GV90 55 aa8.08□□□□□ -1.12
TSPAN4-219ENST00000530404 TRAV7A0A075B6U4 112 aa8.03□□□□□ -1.12
TSPAN4-219ENST00000530404 SCGB1A1P11684 91 aa8.01□□□□□ -1.13
TSPAN4-219ENST00000530404 ACYP2P14621 99 aa7.98□□□□□ -1.13
TSPAN4-219ENST00000530404 DSTQ03001 7570 aaKnown RBP7.94□□□□□ -1.14
TSPAN4-219ENST00000530404 SPTSSBQ8NFR3 76 aa7.91□□□□□ -1.14
TSPAN4-219ENST00000530404 GPR98Q8WXG9 6306 aa7.86□□□□□ -1.15
TSPAN4-219ENST00000530404 CHKB-CPT1BH3BT56 60 aa7.85□□□□□ -1.15
TSPAN4-219ENST00000530404 KRTAP13-4Q3LI77 160 aa7.83□□□□□ -1.16
TSPAN4-219ENST00000530404 KRTAP4-9Q9BYQ8 210 aa7.83□□□□□ -1.16
TSPAN4-219ENST00000530404 KRTAP19-7Q3SYF9 63 aa7.8□□□□□ -1.16
TSPAN4-219ENST00000530404 LCE5AQ5TCM9 118 aa7.8□□□□□ -1.16
TSPAN4-219ENST00000530404 J3QR89 54 aa7.78□□□□□ -1.16
TSPAN4-219ENST00000530404 CAMK2N1Q7Z7J9 78 aa7.78□□□□□ -1.16
TSPAN4-219ENST00000530404 MT1EP04732 61 aa7.75□□□□□ -1.17
TSPAN4-219ENST00000530404 KRTAP19-3Q7Z4W3 81 aa7.75□□□□□ -1.17
TSPAN4-219ENST00000530404 SNURFQ9Y675 71 aa7.67□□□□□ -1.18
TSPAN4-219ENST00000530404 SMIM20Q8N5G0 67 aa7.63□□□□□ -1.19
TSPAN4-219ENST00000530404 CYSTM1Q9H1C7 97 aa7.59□□□□□ -1.19
TSPAN4-219ENST00000530404 LCE1DQ5T752 114 aa7.58□□□□□ -1.2
TSPAN4-219ENST00000530404 A0A0D9SG42 100 aa7.55□□□□□ -1.2
TSPAN4-219ENST00000530404 K7ERU9 68 aa7.55□□□□□ -1.2
TSPAN4-219ENST00000530404 KRTAP19-5Q3LI72 72 aa7.54□□□□□ -1.2
TSPAN4-219ENST00000530404 SPANXA2-OT1Q8N9U9 137 aa7.52□□□□□ -1.21
TSPAN4-219ENST00000530404 MT1GP13640 62 aa7.49□□□□□ -1.21
TSPAN4-219ENST00000530404 HMCN1Q96RW7 5635 aa7.48□□□□□ -1.21
TSPAN4-219ENST00000530404 MT4P47944 62 aa7.47□□□□□ -1.21
TSPAN4-219ENST00000530404 SPATA8Q6RVD6 105 aa7.46□□□□□ -1.22
TSPAN4-219ENST00000530404 SPINT4Q6UDR6 99 aa7.45□□□□□ -1.22
TSPAN4-219ENST00000530404 LCE4AQ5TA78 99 aa7.42□□□□□ -1.22
TSPAN4-219ENST00000530404 PP632Q6XCG6 107 aa7.42□□□□□ -1.22
TSPAN4-219ENST00000530404 MT1MQ8N339 61 aa7.41□□□□□ -1.22
TSPAN4-219ENST00000530404 COA5Q86WW8 74 aa7.4□□□□□ -1.22
TSPAN4-219ENST00000530404 SERP1Q9Y6X1 66 aa7.37□□□□□ -1.23
TSPAN4-219ENST00000530404 AHNAK2Q8IVF2 5795 aa7.37□□□□□ -1.23
TSPAN4-219ENST00000530404 SEC61GP60059 68 aa7.36□□□□□ -1.23
TSPAN4-219ENST00000530404 MT1LQ93083 61 aa7.36□□□□□ -1.23
TSPAN4-219ENST00000530404 KRTAP12-1P59990 96 aa7.35□□□□□ -1.23
TSPAN4-219ENST00000530404 KRTAP4-3Q9BYR4 195 aa7.32□□□□□ -1.24
TSPAN4-219ENST00000530404 A0A1B0GU33 70 aa7.3□□□□□ -1.24
TSPAN4-219ENST00000530404 SERP2Q8N6R1 65 aa7.3□□□□□ -1.24
TSPAN4-219ENST00000530404 KRTAP5-4Q6L8H1 288 aa7.23□□□□□ -1.25
TSPAN4-219ENST00000530404 LCE3AQ5TA76 89 aa7.21□□□□□ -1.26
TSPAN4-219ENST00000530404 KRTAP4-6Q9BYQ5 205 aa7.21□□□□□ -1.26
TSPAN4-219ENST00000530404 C10orf95Q9H7T3 257 aa7.21□□□□□ -1.26
TSPAN4-219ENST00000530404 KRTAP5-10Q6L8G5 202 aa7.18□□□□□ -1.26
TSPAN4-219ENST00000530404 A8MU10 97 aa7.12□□□□□ -1.27
TSPAN4-219ENST00000530404 SMIM26A0A096LP01 95 aa7.07□□□□□ -1.28
TSPAN4-219ENST00000530404 TNP1P09430 55 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms