RNA–Protein interactions for RNA: ENST00000529565.1

CASP4-207, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 4,745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-207ENST00000529565 COL7A1Q02388 2944 aa2.28□□□□□ -2.05
CASP4-207ENST00000529565 PRO2289Q9P1D8 64 aa2.27□□□□□ -2.05
CASP4-207ENST00000529565 KRTAP4-5Q9BYR2 181 aa2.26□□□□□ -2.05
CASP4-207ENST00000529565 SRRM2Q9UQ35 2752 aaKnown RBP2.24□□□□□ -2.05
CASP4-207ENST00000529565 VPS13DQ5THJ4 4388 aa2.21□□□□□ -2.06
CASP4-207ENST00000529565 DNAH10Q8IVF4 4471 aa2.2□□□□□ -2.06
CASP4-207ENST00000529565 KRTAP10-6P60371 365 aaPredicted RBP2.2□□□□□ -2.06
CASP4-207ENST00000529565 PLECQ15149 4684 aaKnown RBP2.2□□□□□ -2.06
CASP4-207ENST00000529565 DNAH1Q9P2D7 4330 aa2.2□□□□□ -2.06
CASP4-207ENST00000529565 DNAH11Q96DT5 4516 aa2.2□□□□□ -2.06
CASP4-207ENST00000529565 DNHD1Q96M86 4753 aa2.2□□□□□ -2.06
CASP4-207ENST00000529565 KRTAP12-1P59990 96 aa2.2□□□□□ -2.06
CASP4-207ENST00000529565 KRTAP12-2P59991 146 aa2.19□□□□□ -2.06
CASP4-207ENST00000529565 DNAH5Q8TE73 4624 aa2.19□□□□□ -2.06
CASP4-207ENST00000529565 ANK2Q01484 3957 aa2.19□□□□□ -2.06
CASP4-207ENST00000529565 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.19□□□□□ -2.06
CASP4-207ENST00000529565 C10orf95Q9H7T3 257 aa2.19□□□□□ -2.06
CASP4-207ENST00000529565 KRTAP15-1Q3LI76 137 aa2.18□□□□□ -2.06
CASP4-207ENST00000529565 DNAH17Q9UFH2 4485 aa2.18□□□□□ -2.06
CASP4-207ENST00000529565 KRTAP13-4Q3LI77 160 aa2.17□□□□□ -2.06
CASP4-207ENST00000529565 KRTAP9-8Q9BYQ0 159 aa2.16□□□□□ -2.06
CASP4-207ENST00000529565 KRTAP19-1Q8IUB9 90 aa2.15□□□□□ -2.07
CASP4-207ENST00000529565 STARD9Q9P2P6 4700 aa2.14□□□□□ -2.07
CASP4-207ENST00000529565 KRTAP4-12Q9BQ66 201 aa2.14□□□□□ -2.07
CASP4-207ENST00000529565 DNAH3Q8TD57 4116 aa2.14□□□□□ -2.07
CASP4-207ENST00000529565 DYNC1H1Q14204 4646 aaKnown RBP2.14□□□□□ -2.07
CASP4-207ENST00000529565 KRTAP4-8Q9BYQ9 185 aa2.13□□□□□ -2.07
CASP4-207ENST00000529565 DYNC2H1Q8NCM8 4307 aaKnown RBP2.12□□□□□ -2.07
CASP4-207ENST00000529565 KRTAP5-3Q6L8H2 238 aa2.11□□□□□ -2.07
CASP4-207ENST00000529565 LRP1BQ9NZR2 4599 aa2.11□□□□□ -2.07
CASP4-207ENST00000529565 NDUFAF8A1L188 74 aa2.11□□□□□ -2.07
CASP4-207ENST00000529565 DNAH2Q9P225 4427 aa2.11□□□□□ -2.07
CASP4-207ENST00000529565 BIRC6Q9NR09 4857 aa2.11□□□□□ -2.07
CASP4-207ENST00000529565 DNAH6Q9C0G6 4158 aa2.1□□□□□ -2.07
CASP4-207ENST00000529565 KRTAP9-2Q9BYQ4 174 aa2.1□□□□□ -2.07
CASP4-207ENST00000529565 KRTAP4-2Q9BYR5 136 aa2.1□□□□□ -2.07
CASP4-207ENST00000529565 FAT2Q9NYQ8 4349 aa2.1□□□□□ -2.07
CASP4-207ENST00000529565 KRTAP9-9Q9BYP9 154 aa2.09□□□□□ -2.08
CASP4-207ENST00000529565 KRTAP9-4Q9BYQ2 154 aa2.09□□□□□ -2.08
CASP4-207ENST00000529565 KRTAP9-7A8MTY7 169 aa2.08□□□□□ -2.08
CASP4-207ENST00000529565 LCE3BQ5TA77 95 aa2.07□□□□□ -2.08
CASP4-207ENST00000529565 SACSQ9NZJ4 4579 aa2.07□□□□□ -2.08
CASP4-207ENST00000529565 CMYA5Q8N3K9 4069 aa2.06□□□□□ -2.08
CASP4-207ENST00000529565 KRTAP4-1Q9BYQ7 146 aa2.06□□□□□ -2.08
CASP4-207ENST00000529565 LCE5AQ5TCM9 118 aa2.06□□□□□ -2.08
CASP4-207ENST00000529565 DNAH8Q96JB1 4490 aa2.05□□□□□ -2.08
CASP4-207ENST00000529565 FAT1Q14517 4588 aa2.05□□□□□ -2.08
CASP4-207ENST00000529565 KRTAP9-3Q9BYQ3 159 aa2.03□□□□□ -2.08
CASP4-207ENST00000529565 RYR1P21817 5038 aa2.03□□□□□ -2.08
CASP4-207ENST00000529565 LYSTQ99698 3801 aa2.03□□□□□ -2.08
CASP4-207ENST00000529565 KMT2AQ03164 3969 aa2.02□□□□□ -2.09
CASP4-207ENST00000529565 CRCT1Q9UGL9 99 aa2.02□□□□□ -2.09
CASP4-207ENST00000529565 MT1HP80294 61 aa2.02□□□□□ -2.09
CASP4-207ENST00000529565 KRTAP10-12P60413 245 aa2.01□□□□□ -2.09
CASP4-207ENST00000529565 LCE4AQ5TA78 99 aa2.01□□□□□ -2.09
CASP4-207ENST00000529565 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.01□□□□□ -2.09
CASP4-207ENST00000529565 RYR2Q92736 4967 aa2□□□□□ -2.09
CASP4-207ENST00000529565 DNAH7Q8WXX0 4024 aa2□□□□□ -2.09
CASP4-207ENST00000529565 KIAA1109Q2LD37 5005 aa1.99□□□□□ -2.09
CASP4-207ENST00000529565 FAT3Q8TDW7 4589 aa1.99□□□□□ -2.09
CASP4-207ENST00000529565 RYR3Q15413 4870 aa1.98□□□□□ -2.09
CASP4-207ENST00000529565 MT3P25713 68 aa1.98□□□□□ -2.09
CASP4-207ENST00000529565 VPS13BQ7Z7G8 4022 aa1.98□□□□□ -2.09
CASP4-207ENST00000529565 MT2AP02795 61 aa1.98□□□□□ -2.09
CASP4-207ENST00000529565 SPRR2GQ9BYE4 73 aa1.98□□□□□ -2.09
CASP4-207ENST00000529565 APOBP04114 4563 aaKnown RBP1.97□□□□□ -2.09
CASP4-207ENST00000529565 HECTD4Q9Y4D8 3996 aa1.97□□□□□ -2.09
CASP4-207ENST00000529565 LCE1DQ5T752 114 aa1.96□□□□□ -2.09
CASP4-207ENST00000529565 KRTAP12-3P60328 96 aa1.94□□□□□ -2.1
CASP4-207ENST00000529565 MT1FP04733 61 aa1.93□□□□□ -2.1
CASP4-207ENST00000529565 LCE3AQ5TA76 89 aa1.92□□□□□ -2.1
CASP4-207ENST00000529565 HYDINQ4G0P3 5121 aa1.91□□□□□ -2.1
CASP4-207ENST00000529565 KRTAP5-2Q701N4 177 aa1.91□□□□□ -2.1
CASP4-207ENST00000529565 KRTAP4-8A0A0G2JLE6 195 aa1.91□□□□□ -2.1
CASP4-207ENST00000529565 LCE1FQ5T754 118 aa1.9□□□□□ -2.1
CASP4-207ENST00000529565 HSPG2P98160 4391 aa1.9□□□□□ -2.11
CASP4-207ENST00000529565 HERC2O95714 4834 aa1.9□□□□□ -2.11
CASP4-207ENST00000529565 LRP1Q07954 4544 aaKnown RBP1.89□□□□□ -2.11
CASP4-207ENST00000529565 KRTAP4-7Q9BYR0 210 aa1.89□□□□□ -2.11
CASP4-207ENST00000529565 MYCBP2O75592 4640 aa1.89□□□□□ -2.11
CASP4-207ENST00000529565 KRTAP19-8Q3LI54 63 aa1.88□□□□□ -2.11
CASP4-207ENST00000529565 KRTAP20-1Q3LI63 56 aa1.88□□□□□ -2.11
CASP4-207ENST00000529565 KRTAP8-1Q8IUC2 63 aa1.88□□□□□ -2.11
CASP4-207ENST00000529565 PKHD1L1Q86WI1 4243 aa1.88□□□□□ -2.11
CASP4-207ENST00000529565 PKD1P98161 4303 aa1.87□□□□□ -2.11
CASP4-207ENST00000529565 HERC1Q15751 4861 aa1.87□□□□□ -2.11
CASP4-207ENST00000529565 KRTAP4-9Q9BYQ8 210 aa1.86□□□□□ -2.11
CASP4-207ENST00000529565 PKHD1P08F94 4074 aa1.86□□□□□ -2.11
CASP4-207ENST00000529565 FRAS1Q86XX4 4008 aa1.86□□□□□ -2.11
CASP4-207ENST00000529565 PCLOQ9Y6V0 5065 aa1.84□□□□□ -2.12
CASP4-207ENST00000529565 KMT2CQ8NEZ4 4911 aaKnown RBP1.82□□□□□ -2.12
CASP4-207ENST00000529565 KRTAP2-2Q9BYT5 123 aa1.82□□□□□ -2.12
CASP4-207ENST00000529565 KRTAP19-2Q3LHN2 52 aa1.81□□□□□ -2.12
CASP4-207ENST00000529565 KRTAP4-11Q9BYQ6 195 aa1.81□□□□□ -2.12
CASP4-207ENST00000529565 KRTAP10-5P60370 271 aa1.8□□□□□ -2.12
CASP4-207ENST00000529565 LCE1AQ5T7P2 110 aa1.8□□□□□ -2.12
CASP4-207ENST00000529565 INE1O15225 51 aa1.79□□□□□ -2.12
CASP4-207ENST00000529565 MT1BP07438 61 aa1.79□□□□□ -2.12
CASP4-207ENST00000529565 TNXBP22105 4242 aa1.79□□□□□ -2.12
CASP4-207ENST00000529565 LRP2P98164 4655 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms