RNA–Protein interactions for RNA: ENST00000529308.5

USP35-203, Transcript of ubiquitin specific peptidase 35, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP35, Length 4,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-203ENST00000529308 KMT2AQ03164 3969 aa7.5□□□□□ -1.21
USP35-203ENST00000529308 MT1HL1P0DM35 61 aa7.49□□□□□ -1.21
USP35-203ENST00000529308 KRTAP4-5Q9BYR2 181 aa7.48□□□□□ -1.21
USP35-203ENST00000529308 KRTAP10-4P60372 401 aaPredicted RBP7.47□□□□□ -1.21
USP35-203ENST00000529308 KRTAP13-4Q3LI77 160 aa7.47□□□□□ -1.21
USP35-203ENST00000529308 PRKDCP78527 4128 aaKnown RBP7.45□□□□□ -1.22
USP35-203ENST00000529308 VPS13DQ5THJ4 4388 aa7.44□□□□□ -1.22
USP35-203ENST00000529308 DNAH3Q8TD57 4116 aa7.42□□□□□ -1.22
USP35-203ENST00000529308 KRTAP10-6P60371 365 aaPredicted RBP7.42□□□□□ -1.22
USP35-203ENST00000529308 DNAH17Q9UFH2 4485 aa7.41□□□□□ -1.22
USP35-203ENST00000529308 LRP1BQ9NZR2 4599 aa7.4□□□□□ -1.22
USP35-203ENST00000529308 KRTAP12-1P59990 96 aa7.39□□□□□ -1.23
USP35-203ENST00000529308 DNAH2Q9P225 4427 aa7.34□□□□□ -1.24
USP35-203ENST00000529308 MYCBP2O75592 4640 aa7.32□□□□□ -1.24
USP35-203ENST00000529308 PP632Q6XCG6 107 aa7.3□□□□□ -1.24
USP35-203ENST00000529308 DNAH6Q9C0G6 4158 aa7.29□□□□□ -1.24
USP35-203ENST00000529308 KRTAP3-3Q9BYR6 98 aa7.28□□□□□ -1.24
USP35-203ENST00000529308 RYR1P21817 5038 aa7.27□□□□□ -1.25
USP35-203ENST00000529308 HECTD4Q9Y4D8 3996 aa7.27□□□□□ -1.25
USP35-203ENST00000529308 DYNC1H1Q14204 4646 aaKnown RBP7.25□□□□□ -1.25
USP35-203ENST00000529308 KIAA1109Q2LD37 5005 aa7.23□□□□□ -1.25
USP35-203ENST00000529308 KRTAP3-2Q9BYR7 98 aa7.21□□□□□ -1.25
USP35-203ENST00000529308 VPS13BQ7Z7G8 4022 aa7.18□□□□□ -1.26
USP35-203ENST00000529308 ALMS1Q8TCU4 4167 aa7.12□□□□□ -1.27
USP35-203ENST00000529308 DYNC2H1Q8NCM8 4307 aaKnown RBP7.12□□□□□ -1.27
USP35-203ENST00000529308 FAT3Q8TDW7 4589 aa7.12□□□□□ -1.27
USP35-203ENST00000529308 SACSQ9NZJ4 4579 aa7.04□□□□□ -1.28
USP35-203ENST00000529308 PRO2289Q9P1D8 64 aa7.04□□□□□ -1.28
USP35-203ENST00000529308 LRP1Q07954 4544 aaKnown RBP7.01□□□□□ -1.29
USP35-203ENST00000529308 RYR3Q15413 4870 aa7□□□□□ -1.29
USP35-203ENST00000529308 HYDINQ4G0P3 5121 aa6.99□□□□□ -1.29
USP35-203ENST00000529308 LORP23490 312 aaPredicted RBP6.98□□□□□ -1.29
USP35-203ENST00000529308 PKHD1P08F94 4074 aa6.94□□□□□ -1.3
USP35-203ENST00000529308 APOBP04114 4563 aaKnown RBP6.9□□□□□ -1.3
USP35-203ENST00000529308 KRTAP4-1Q9BYQ7 146 aa6.83□□□□□ -1.32
USP35-203ENST00000529308 FAT2Q9NYQ8 4349 aa6.83□□□□□ -1.32
USP35-203ENST00000529308 KRTAP17-1Q9BYP8 105 aa6.76□□□□□ -1.33
USP35-203ENST00000529308 LRP2P98164 4655 aa6.75□□□□□ -1.33
USP35-203ENST00000529308 KRTAP15-1Q3LI76 137 aa6.73□□□□□ -1.33
USP35-203ENST00000529308 PKD1P98161 4303 aa6.73□□□□□ -1.33
USP35-203ENST00000529308 KMT2CQ8NEZ4 4911 aaKnown RBP6.66□□□□□ -1.34
USP35-203ENST00000529308 HERC2O95714 4834 aa6.64□□□□□ -1.35
USP35-203ENST00000529308 RYR2Q92736 4967 aa6.57□□□□□ -1.36
USP35-203ENST00000529308 KRTAP10-12P60413 245 aa6.55□□□□□ -1.36
USP35-203ENST00000529308 HSPG2P98160 4391 aa6.54□□□□□ -1.36
USP35-203ENST00000529308 LCE3AQ5TA76 89 aa6.49□□□□□ -1.37
USP35-203ENST00000529308 PCLOQ9Y6V0 5065 aa6.45□□□□□ -1.38
USP35-203ENST00000529308 KRTAP12-3P60328 96 aa6.42□□□□□ -1.38
USP35-203ENST00000529308 MT1HP80294 61 aa6.39□□□□□ -1.39
USP35-203ENST00000529308 PKHD1L1Q86WI1 4243 aa6.38□□□□□ -1.39
USP35-203ENST00000529308 CRCT1Q9UGL9 99 aa6.38□□□□□ -1.39
USP35-203ENST00000529308 LPAP08519 4548 aa6.37□□□□□ -1.39
USP35-203ENST00000529308 MT2AP02795 61 aa6.33□□□□□ -1.4
USP35-203ENST00000529308 EPPK1P58107 5090 aaKnown RBP6.31□□□□□ -1.4
USP35-203ENST00000529308 MT1FP04733 61 aa6.29□□□□□ -1.4
USP35-203ENST00000529308 TNXBP22105 4242 aa6.27□□□□□ -1.4
USP35-203ENST00000529308 SPRR2GQ9BYE4 73 aa6.2□□□□□ -1.42
USP35-203ENST00000529308 FSIP2Q5CZC0 6907 aa6.17□□□□□ -1.42
USP35-203ENST00000529308 ABCA13Q86UQ4 5058 aa6.16□□□□□ -1.42
USP35-203ENST00000529308 KRTAP23-1A1A580 65 aa6.14□□□□□ -1.43
USP35-203ENST00000529308 BIRC6Q9NR09 4857 aa6.12□□□□□ -1.43
USP35-203ENST00000529308 MUC2Q02817 5179 aa6.1□□□□□ -1.43
USP35-203ENST00000529308 KRTAP19-1Q8IUB9 90 aa6.08□□□□□ -1.44
USP35-203ENST00000529308 RNF213Q63HN8 5207 aa6.07□□□□□ -1.44
USP35-203ENST00000529308 INE1O15225 51 aa6.07□□□□□ -1.44
USP35-203ENST00000529308 HERC1Q15751 4861 aa6.04□□□□□ -1.44
USP35-203ENST00000529308 KRTAP8-1Q8IUC2 63 aa6.01□□□□□ -1.45
USP35-203ENST00000529308 UBR4Q5T4S7 5183 aa5.99□□□□□ -1.45
USP35-203ENST00000529308 FAT4Q6V0I7 4981 aa5.92□□□□□ -1.46
USP35-203ENST00000529308 LCE2CQ5TA81 110 aa5.91□□□□□ -1.46
USP35-203ENST00000529308 KRTAP19-5Q3LI72 72 aa5.89□□□□□ -1.47
USP35-203ENST00000529308 KRTAP10-7P60409 375 aaPredicted RBP5.88□□□□□ -1.47
USP35-203ENST00000529308 KRTAP9-8Q9BYQ0 159 aa5.86□□□□□ -1.47
USP35-203ENST00000529308 SYNE1Q8NF91 8797 aaKnown RBP5.84□□□□□ -1.48
USP35-203ENST00000529308 MUC17Q685J3 4493 aa5.83□□□□□ -1.48
USP35-203ENST00000529308 KRTAP10-5P60370 271 aa5.81□□□□□ -1.48
USP35-203ENST00000529308 MT1BP07438 61 aa5.79□□□□□ -1.48
USP35-203ENST00000529308 KRTAP19-8Q3LI54 63 aa5.79□□□□□ -1.48
USP35-203ENST00000529308 OBSCNQ5VST9 7968 aa5.79□□□□□ -1.48
USP35-203ENST00000529308 KRTAP19-2Q3LHN2 52 aa5.79□□□□□ -1.48
USP35-203ENST00000529308 MT1XP80297 61 aa5.78□□□□□ -1.48
USP35-203ENST00000529308 KRTAP4-8A0A0G2JLE6 195 aa5.72□□□□□ -1.49
USP35-203ENST00000529308 KRTAP4-8Q9BYQ9 185 aa5.72□□□□□ -1.49
USP35-203ENST00000529308 SPRR2FQ96RM1 72 aa5.7□□□□□ -1.5
USP35-203ENST00000529308 FLGP20930 4061 aaPredicted RBP5.7□□□□□ -1.5
USP35-203ENST00000529308 LCE3CQ5T5A8 94 aa5.66□□□□□ -1.5
USP35-203ENST00000529308 KRTAP9-3Q9BYQ3 159 aa5.65□□□□□ -1.51
USP35-203ENST00000529308 HMCN2Q8NDA2 5059 aa5.58□□□□□ -1.52
USP35-203ENST00000529308 SPRR5A0A1B0GTR4 108 aa5.55□□□□□ -1.52
USP35-203ENST00000529308 LCE2BO14633 110 aa5.53□□□□□ -1.52
USP35-203ENST00000529308 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
USP35-203ENST00000529308 DSTQ03001 7570 aaKnown RBP5.37□□□□□ -1.55
USP35-203ENST00000529308 MT1GP13640 62 aa5.37□□□□□ -1.55
USP35-203ENST00000529308 USH2AO75445 5202 aa5.35□□□□□ -1.55
USP35-203ENST00000529308 FCGBPQ9Y6R7 5405 aaPredicted RBP5.29□□□□□ -1.56
USP35-203ENST00000529308 LCE3BQ5TA77 95 aa5.26□□□□□ -1.57
USP35-203ENST00000529308 SPRR2EP22531 72 aa5.19□□□□□ -1.58
USP35-203ENST00000529308 SPRR2BP35325 72 aa5.19□□□□□ -1.58
USP35-203ENST00000529308 SPRR2AP35326 72 aa5.19□□□□□ -1.58
USP35-203ENST00000529308 KMT2DO14686 5537 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms